Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4h24
(471 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open readi... 52 1e-06
BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein. 52 1e-06
AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein. 52 1e-06
AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein. 52 1e-06
AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein. 52 1e-06
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 33 0.38
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 33 0.38
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 33 0.38
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 33 0.38
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 33 0.38
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 33 0.38
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 33 0.38
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 33 0.38
AY358185-1|AAQ88552.1| 613|Homo sapiens olfactomedin-like protein. 29 6.1
AL354928-4|CAI39635.2| 652|Homo sapiens olfactomedin-like 2A pr... 29 6.1
AL354928-3|CAI39634.1| 318|Homo sapiens olfactomedin-like 2A pr... 29 6.1
AK074709-1|BAC11152.1| 353|Homo sapiens protein ( Homo sapiens ... 29 6.1
AB119055-1|BAD38864.1| 652|Homo sapiens photomedin-1 protein. 29 6.1
>BC116455-1|AAI16456.1| 125|Homo sapiens chromosome 1 open reading
frame 31 protein.
Length = 125
Score = 52.0 bits (119), Expect = 1e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 378
C R FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 79 CKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 118
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 132 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNTE 233
F + M+ P ++R+ CW ARD+YW+CLD +N E
Sbjct: 42 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLE 74
>BC025793-1|AAH25793.1| 106|Homo sapiens C1orf31 protein protein.
Length = 106
Score = 52.0 bits (119), Expect = 1e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 378
C R FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 60 CKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 99
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 132 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNTE 233
F + M+ P ++R+ CW ARD+YW+CLD +N E
Sbjct: 23 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLE 55
>AL355472-4|CAI22930.1| 79|Homo sapiens novel protein protein.
Length = 79
Score = 52.0 bits (119), Expect = 1e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 378
C R FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 33 CKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 72
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +3
Query: 147 MSFPDKEQRKKCWDARDKYWECLDSQNTE 233
M+ P ++R+ CW ARD+YW+CLD +N E
Sbjct: 1 MAAPSMKERQVCWGARDEYWKCLD-ENLE 28
>AL355472-3|CAI22929.1| 125|Homo sapiens novel protein protein.
Length = 125
Score = 52.0 bits (119), Expect = 1e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 378
C R FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 79 CKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 118
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 132 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNTE 233
F + M+ P ++R+ CW ARD+YW+CLD +N E
Sbjct: 42 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLE 74
>AL355472-2|CAI22928.1| 155|Homo sapiens novel protein protein.
Length = 155
Score = 52.0 bits (119), Expect = 1e-06
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEP 378
C R FE SCP QW+ +FD++RD+ FKEK + +EP
Sbjct: 109 CKKLRSSFESSCPQQWIKYFDKRRDYLKFKEKFEAGQFEP 148
Score = 41.5 bits (93), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 132 FT*IRMSFPDKEQRKKCWDARDKYWECLDSQNTE 233
F + M+ P ++R+ CW ARD+YW+CLD +N E
Sbjct: 72 FIAVGMAAPSMKERQVCWGARDEYWKCLD-ENLE 104
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 33.5 bits (73), Expect = 0.38
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 259 CTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKM 357
C ++++++ CPT WVT +D +R F K+
Sbjct: 54 CEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>AY358185-1|AAQ88552.1| 613|Homo sapiens olfactomedin-like protein.
Length = 613
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 61 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 210
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 132 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 181
>AL354928-4|CAI39635.2| 652|Homo sapiens olfactomedin-like 2A
protein.
Length = 652
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 61 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 210
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 171 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 220
>AL354928-3|CAI39634.1| 318|Homo sapiens olfactomedin-like 2A
protein.
Length = 318
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 61 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 210
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 135 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 184
>AK074709-1|BAC11152.1| 353|Homo sapiens protein ( Homo sapiens
cDNA FLJ90228 fis, clone NT2RM2000241. ).
Length = 353
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 61 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 210
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 135 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 184
>AB119055-1|BAD38864.1| 652|Homo sapiens photomedin-1 protein.
Length = 652
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 61 IKHLNKYLGIYETYR*LCLSFDFNLRR*GCPFLIKSKEKSAGTPEINTGS 210
++HL++ L YE + + L L R G L K + TP TGS
Sbjct: 171 VRHLSEQLRHYENHSAIMLGIKKELSRLGLQLLQKDAAAAPATPATGTGS 220
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,580,929
Number of Sequences: 237096
Number of extensions: 1231221
Number of successful extensions: 2149
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2149
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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