Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4h24
         (471 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL050231-3|CAB65851.1|  674|Drosophila melanogaster EG:BACR37P7....    67   1e-11
AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-P...    33   0.15 
AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-P...    33   0.15 
AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-P...    33   0.15 
AE014296-1977|AAN11875.1|  491|Drosophila melanogaster CG32086-P...    29   2.4  
X80028-1|CAA56332.1| 1126|Drosophila melanogaster dhem2 protein.       29   4.2  
AY118579-1|AAM49948.1| 1126|Drosophila melanogaster LD43495p pro...    29   4.2  
AE014296-3665|AAF51820.1| 1126|Drosophila melanogaster CG5837-PA...    29   4.2  

>AL050231-3|CAB65851.1|  674|Drosophila melanogaster
           EG:BACR37P7.3,FBgn0000316;cin protein.
          Length = 674

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +1

Query: 250 PLACTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEGYEPIKDSQ*IC 402
           P  C + RK FE+SCP QWV HFDRKR ++ FKEKM  +GY+P++D    C
Sbjct: 39  PTPCQSLRKSFEQSCPGQWVKHFDRKRTYDQFKEKM-AQGYDPLEDLSDTC 88



 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 17/24 (70%), Positives = 22/24 (91%)
 Frame = +3

Query: 147 MSFPDKEQRKKCWDARDKYWECLD 218
           MSFPDK +RKKCW+ RD+YW+CL+
Sbjct: 1   MSFPDKAERKKCWNNRDEYWKCLE 24


>AE014298-2928|AAN09514.1|   77|Drosophila melanogaster CG14235-PC,
           isoform C protein.
          Length = 77

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 223 RIRKDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRDFNVF 345
           R +K   +    C  F+K+++  CP  WV  +D +R+   F
Sbjct: 33  RCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRESGTF 73


>AE014298-2927|AAN09513.1|   77|Drosophila melanogaster CG14235-PB,
           isoform B protein.
          Length = 77

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 223 RIRKDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRDFNVF 345
           R +K   +    C  F+K+++  CP  WV  +D +R+   F
Sbjct: 33  RCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRESGTF 73


>AE014298-2926|AAF49015.2|   96|Drosophila melanogaster CG14235-PA,
           isoform A protein.
          Length = 96

 Score = 33.5 bits (73), Expect = 0.15
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 223 RIRKDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRDFNVF 345
           R +K   +    C  F+K+++  CP  WV  +D +R+   F
Sbjct: 52  RCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRESGTF 92


>AE014296-1977|AAN11875.1|  491|Drosophila melanogaster CG32086-PA
           protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 217 TLRIRKDSSQKPLACTNFRKIFEKSCPTQWVTHFD 321
           +  IR D+ +  LA +NFR I ++ C T+ V + D
Sbjct: 321 SFHIRLDAQKIRLALSNFRLIVDEGCATERVNYVD 355


>X80028-1|CAA56332.1| 1126|Drosophila melanogaster dhem2 protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 250 PLACTNFRKIFEKSCPTQWVTHFDRKRDF---NVFKEKMQKE 366
           PL C++F+    + CP +   H  R+R     N+F E+M KE
Sbjct: 570 PLICSHFQNCTHEMCPEE--RHHIRERSLSVVNIFLEEMAKE 609


>AY118579-1|AAM49948.1| 1126|Drosophila melanogaster LD43495p
           protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 250 PLACTNFRKIFEKSCPTQWVTHFDRKRDF---NVFKEKMQKE 366
           PL C++F+    + CP +   H  R+R     N+F E+M KE
Sbjct: 570 PLICSHFQNCTHEMCPEE--RHHIRERSLSVVNIFLEEMAKE 609


>AE014296-3665|AAF51820.1| 1126|Drosophila melanogaster CG5837-PA
           protein.
          Length = 1126

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 250 PLACTNFRKIFEKSCPTQWVTHFDRKRDF---NVFKEKMQKE 366
           PL C++F+    + CP +   H  R+R     N+F E+M KE
Sbjct: 570 PLICSHFQNCTHEMCPEE--RHHIRERSLSVVNIFLEEMAKE 609


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,814,681
Number of Sequences: 53049
Number of extensions: 353005
Number of successful extensions: 653
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)