Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4h24
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-9|CAN86912.1| 90|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U41991-9|AAA83349.1| 297|Caenorhabditis elegans Hypothetical pr... 28 2.9
AL023858-1|CAA19568.2| 328|Caenorhabditis elegans Hypothetical ... 27 5.1
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 27 6.8
U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical pr... 27 6.8
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 27 9.0
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 27 9.0
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 27 9.0
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 27 9.0
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 27 9.0
>Z75714-9|CAN86912.1| 90|Caenorhabditis elegans Hypothetical
protein ZC434.7b protein.
Length = 90
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 232 KDSSQKPLACTNFRKIFEKSCPTQWVTHFDRKRDFNVFKEKMQKEG 369
K + +C + RK F+ +CPT WV HF RK F +K+ + +G
Sbjct: 34 KSEKEATNSCRSERKNFDGNCPTSWVNHFIRKDQFERYKKTLAAQG 79
Score = 33.1 bits (72), Expect = 0.10
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 162 KEQRKKCWDARDKYWECLDSQNTEGQ 239
K +R+KC++ARD+Y C+D ++G+
Sbjct: 9 KSERRKCYEARDQYAACIDKFLSQGK 34
>U41991-9|AAA83349.1| 297|Caenorhabditis elegans Hypothetical
protein C42D4.11 protein.
Length = 297
Score = 28.3 bits (60), Expect = 2.9
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 265 NFRKIFEKSCPTQWVTHFDRKR 330
NF KSCP QW HFDR R
Sbjct: 119 NFSYSAMKSCPPQW-EHFDRAR 139
>AL023858-1|CAA19568.2| 328|Caenorhabditis elegans Hypothetical
protein ZK285.1 protein.
Length = 328
Score = 27.5 bits (58), Expect = 5.1
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = -1
Query: 381 YGF-ITLFL-HFFFKYIEISFSIKMRNPLGRAGLFKYF-PKVRTS*WFL*TVLPYSESLS 211
YGF +++F HF ++Y ++ K + G+ LF Y P + W L T L ES S
Sbjct: 96 YGFSMSIFACHFIYRYGNVNTIFKQKYISGKKHLFLYIAPLLSGFVWGLVTWLTMHESSS 155
Query: 210 TPS 202
S
Sbjct: 156 KTS 158
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 27.1 bits (57), Expect = 6.8
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -1
Query: 237 VLPYSESLSTPSIYLWRPSTFFFALYQERTSL 142
+ PYS +T S Y+W+P F ++ S+
Sbjct: 350 LFPYSWDNATKSSYIWKPKEKTFLTFENERSI 381
>U00048-5|AAB53832.2| 621|Caenorhabditis elegans Hypothetical
protein C05D11.7a protein.
Length = 621
Score = 27.1 bits (57), Expect = 6.8
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 239 LSFRILRV*ALPVFISGVPALFSLLFIRKGHPYL 138
+SFR++R + IS P +L F++K H YL
Sbjct: 360 MSFRLVRYATTAMGISKFPFDMALAFVKKVHQYL 393
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 163 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 74
L G D++ YVN NQNL A + R F ++Y
Sbjct: 40 LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 68
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 163 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 74
L G D++ YVN NQNL A + R F ++Y
Sbjct: 31 LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 59
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 163 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 74
L G D++ YVN NQNL A + R F ++Y
Sbjct: 41 LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 69
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 163 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 74
L G D++ YVN NQNL A + R F ++Y
Sbjct: 41 LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 69
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 163 LSGKDILIYVN*NQNLDKASDRFRIFPNIY 74
L G D++ YVN NQNL A + R F ++Y
Sbjct: 41 LDGDDLIDYVNENQNLWTAKKQ-RRFSSVY 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,839,686
Number of Sequences: 27780
Number of extensions: 208343
Number of successful extensions: 523
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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