Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4h22
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025275-1|AAH25275.1| 483|Homo sapiens ATPase, H+ transporting... 203 5e-52
AF298777-1|AAG22809.1| 483|Homo sapiens vacuolar ATPase subunit... 203 5e-52
AF132945-1|AAD27720.1| 483|Homo sapiens CGI-11 protein protein. 203 5e-52
AF112204-1|AAF17192.1| 483|Homo sapiens Vacuolar proton pump su... 203 5e-52
AF125105-1|AAL75942.1| 476|Homo sapiens vacuolar proton pump su... 199 1e-50
AL139244-2|CAI18990.1| 569|Homo sapiens novel protein protein. 32 2.5
BX537852-1|CAD97860.1| 651|Homo sapiens hypothetical protein pr... 30 7.6
AK123061-1|BAC85527.1| 712|Homo sapiens (LGR6) mRNA. protein. 30 7.6
>BC025275-1|AAH25275.1| 483|Homo sapiens ATPase, H+ transporting,
lysosomal 50/57kDa, V1 subunit H protein.
Length = 483
Score = 203 bits (496), Expect = 5e-52
Identities = 97/238 (40%), Positives = 153/238 (64%), Gaps = 24/238 (10%)
Frame = +3
Query: 69 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKNP 236
D T+++ +A+E+R ++NWQSYLQ QMI+ D +FI + + ++++
Sbjct: 11 DAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEG 70
Query: 237 DACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNLL 410
CA+ F+NL+THI K+ T+QYIL ++DD+L E+ RV IF + + S N W FL +L
Sbjct: 71 SQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPML 130
Query: 411 NRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL------------------ 536
NRQD F HM ARIIAKLA W +LM+ SDL++Y +W+K QL
Sbjct: 131 NRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVS 190
Query: 537 KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 710
++++ Y+Q VA CLQ+MLR++EYRFA++ DG++ ++ +L+++ FQ+QYQ++F +W
Sbjct: 191 SSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIW 248
>AF298777-1|AAG22809.1| 483|Homo sapiens vacuolar ATPase subunit H
protein.
Length = 483
Score = 203 bits (496), Expect = 5e-52
Identities = 97/238 (40%), Positives = 153/238 (64%), Gaps = 24/238 (10%)
Frame = +3
Query: 69 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKNP 236
D T+++ +A+E+R ++NWQSYLQ QMI+ D +FI + + ++++
Sbjct: 11 DAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEG 70
Query: 237 DACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNLL 410
CA+ F+NL+THI K+ T+QYIL ++DD+L E+ RV IF + + S N W FL +L
Sbjct: 71 SQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPML 130
Query: 411 NRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL------------------ 536
NRQD F HM ARIIAKLA W +LM+ SDL++Y +W+K QL
Sbjct: 131 NRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVS 190
Query: 537 KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 710
++++ Y+Q VA CLQ+MLR++EYRFA++ DG++ ++ +L+++ FQ+QYQ++F +W
Sbjct: 191 SSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIW 248
>AF132945-1|AAD27720.1| 483|Homo sapiens CGI-11 protein protein.
Length = 483
Score = 203 bits (496), Expect = 5e-52
Identities = 97/238 (40%), Positives = 153/238 (64%), Gaps = 24/238 (10%)
Frame = +3
Query: 69 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKNP 236
D T+++ +A+E+R ++NWQSYLQ QMI+ D +FI + + ++++
Sbjct: 11 DAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEG 70
Query: 237 DACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNLL 410
CA+ F+NL+THI K+ T+QYIL ++DD+L E+ RV IF + + S N W FL +L
Sbjct: 71 SQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPIL 130
Query: 411 NRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL------------------ 536
NRQD F HM ARIIAKLA W +LM+ SDL++Y +W+K QL
Sbjct: 131 NRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVS 190
Query: 537 KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 710
++++ Y+Q VA CLQ+MLR++EYRFA++ DG++ ++ +L+++ FQ+QYQ++F +W
Sbjct: 191 SSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIW 248
>AF112204-1|AAF17192.1| 483|Homo sapiens Vacuolar proton pump
subunit SFD alpha isoform protein.
Length = 483
Score = 203 bits (496), Expect = 5e-52
Identities = 97/238 (40%), Positives = 153/238 (64%), Gaps = 24/238 (10%)
Frame = +3
Query: 69 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKNP 236
D T+++ +A+E+R ++NWQSYLQ QMI+ D +FI + + ++++
Sbjct: 11 DAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEG 70
Query: 237 DACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNLL 410
CA+ F+NL+THI K+ T+QYIL ++DD+L E+ RV IF + + S N W FL +L
Sbjct: 71 SQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPML 130
Query: 411 NRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL------------------ 536
NRQD F HM ARIIAKLA W +LM+ SDL++Y +W+K QL
Sbjct: 131 NRQDPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVS 190
Query: 537 KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 710
++++ Y+Q VA CLQ+MLR++EYRFA++ DG++ ++ +L+++ FQ+QYQ++F +W
Sbjct: 191 SSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIW 248
>AF125105-1|AAL75942.1| 476|Homo sapiens vacuolar proton pump
subunit SFD alpha isoform protein.
Length = 476
Score = 199 bits (485), Expect = 1e-50
Identities = 96/238 (40%), Positives = 151/238 (63%), Gaps = 24/238 (10%)
Frame = +3
Query: 69 DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG----QKDLPDKNP 236
D T+++ +A+E+R ++NWQSYLQ QMI+ D +FI + ++++
Sbjct: 11 DAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMERSPEEKQEMLQTEG 70
Query: 237 DACAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGNV-WQPFLNLL 410
CA+ F+NL+THI K+ T+QYIL ++DD+L E+ RV IF + + S N W FL +L
Sbjct: 71 SQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPML 130
Query: 411 NRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQL------------------ 536
NRQ F HM ARIIAKLA W +LM+ SDL++Y +W+K QL
Sbjct: 131 NRQVPFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVAVETGTVS 190
Query: 537 KTNNNDYIQSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNFQVQYQLVFCLW 710
++++ Y+Q VA CLQ+MLR++EYRFA++ DG++ ++ +L+++ FQ+QYQ++F +W
Sbjct: 191 SSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIW 248
>AL139244-2|CAI18990.1| 569|Homo sapiens novel protein protein.
Length = 569
Score = 31.9 bits (69), Expect = 2.5
Identities = 20/83 (24%), Positives = 36/83 (43%)
Frame = +3
Query: 30 SHLGKTWQMVNISDMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNLDQRG 209
+ L K + + DM T + + +R +NWQ+Y I R + + + G
Sbjct: 299 NRLAKIFYFLGKQDMAIGTCNMALDV--LRDPELNWQAYCTRAKIHIRAYLHDLKRAKMG 356
Query: 210 QKDLPDKNPDACAEVFLNLLTHI 278
+PD+N ACA+ L + +
Sbjct: 357 LGGMPDRNHLACAKADLEEVVRV 379
>BX537852-1|CAD97860.1| 651|Homo sapiens hypothetical protein
protein.
Length = 651
Score = 30.3 bits (65), Expect = 7.6
Identities = 24/99 (24%), Positives = 44/99 (44%)
Frame = +3
Query: 381 NVWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKTNNNDYI 560
N+ + L +L+ D + +TA ++ +L C PQ+ ++ L+ + L L +++ +
Sbjct: 176 NIVENLLMILHEYDLLSKRLTAELL-RLLCAEPQVKEQVKLYEGIPVLLSLLHSDHLKLL 234
Query: 561 QSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNF 677
S+ L + E GI LL IL NF
Sbjct: 235 WSIVWILVQVCEDPETSVEIRIWGGIKQLLHILQGDRNF 273
>AK123061-1|BAC85527.1| 712|Homo sapiens (LGR6) mRNA. protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.6
Identities = 24/99 (24%), Positives = 44/99 (44%)
Frame = +3
Query: 381 NVWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKTNNNDYI 560
N+ + L +L+ D + +TA ++ +L C PQ+ ++ L+ + L L +++ +
Sbjct: 250 NIVENLLMILHEYDLLSKRLTAELL-RLLCAEPQVKEQVKLYEGIPVLLSLLHSDHLKLL 308
Query: 561 QSVARCLQMMLRIDEYRFAFLSVDGISTLLSILASRVNF 677
S+ L + E GI LL IL NF
Sbjct: 309 WSIVWILVQVCEDPETSVEIRIWGGIKQLLHILQGDRNF 347
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,924,905
Number of Sequences: 237096
Number of extensions: 2391597
Number of successful extensions: 5090
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5080
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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