Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4h22
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    25   0.75 
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   2.3  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   2.3  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   2.3  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   2.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.0  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   4.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   5.3  

>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -3

Query: 687 IEPGSSLWRPESTVRWIYHRQRGKQSGIHRYAASSADTGPQTGYSRCY 544
           +E GS  ++     R  +H  RGK+     Y ++S+  G   GY   Y
Sbjct: 245 VESGSESFK---RARMGFHGMRGKRDAAGIYGSNSSTVGTIFGYQGTY 289


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 294 WCGPC*YASGG*ERLRHRHQDSC 226
           WCG    +SG  E  R +H D+C
Sbjct: 36  WCGHGNKSSGPNELGRFKHTDAC 58


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 294 WCGPC*YASGG*ERLRHRHQDSC 226
           WCG    +SG  E  R +H D+C
Sbjct: 41  WCGHGNKSSGPNELGRFKHTDAC 63


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 294 WCGPC*YASGG*ERLRHRHQDSC 226
           WCG    +SG  E  R +H D+C
Sbjct: 41  WCGHGNKSSGPNELGRFKHTDAC 63


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = -3

Query: 687 IEPGSSLWRPESTVRWIYHRQRGKQSGIHRYAASSADTGPQTGY 556
           +E GS  ++     R  +H  RGK+     Y ++S+  G   GY
Sbjct: 245 VESGSESFK---RARMGFHGMRGKRDAAGIYGSNSSTVGTIFGY 285


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = +3

Query: 381 NVWQPFLNLLNRQD--EFVQHMTARIIAKLACWHPQLMDKSDLHFYLSWLKDQLKTNNND 554
           N W+P  NL+N  D  E  +    +++           +  D+  +L++LK   KT  + 
Sbjct: 273 NTWEPISNLINCSDILEEFERNRLQLLESFKRKVNFYPNNQDIEKFLNYLKRGGKTLTSI 332

Query: 555 YIQS 566
            ++S
Sbjct: 333 SVES 336


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/50 (24%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +3

Query: 51  QMVNIS-DMIAATSVLQIRASEIRQTRINWQSYLQSQMITQRDHDFIVNL 197
           ++V I+ D   + ++ Q++ ++I +TR       + +++ + D DF+V L
Sbjct: 382 ELVQIAGDSSRSFALKQMKKAQIVETRQQQHIMSEKRIMGEADCDFVVKL 431


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +1

Query: 604 NTALLSSLSMVYPPYCRFWPPE*TSRFNTNLYFVSGVLTFN 726
           N +  + + ++  PY R W P+     N +  + S V+  N
Sbjct: 70  NASEFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTN 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,474
Number of Sequences: 438
Number of extensions: 4732
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)