Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4h09
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094735-1|AAM11088.1| 1171|Drosophila melanogaster GH27027p pro...   108   5e-24
AE014296-2131|AAS65014.1| 1171|Drosophila melanogaster CG4357-PB...   108   5e-24
AE014296-2130|AAF49927.1| 1171|Drosophila melanogaster CG4357-PA...   108   5e-24
AY122102-1|AAM52614.1| 1068|Drosophila melanogaster GH09711p pro...    95   6e-20
AE014297-262|AAF52018.2|  995|Drosophila melanogaster CG31547-PA...    95   6e-20
AE014297-261|AAF52017.2| 1068|Drosophila melanogaster CG31547-PB...    95   6e-20
BT012491-1|AAS93762.1| 1074|Drosophila melanogaster LD02554p pro...    44   2e-04
AY118761-1|AAM50621.1| 1028|Drosophila melanogaster GH09271p pro...    44   2e-04
AE013599-3729|AAM68277.1| 1028|Drosophila melanogaster CG5594-PB...    44   2e-04
AE013599-3728|AAF47099.2| 1059|Drosophila melanogaster CG5594-PC...    44   2e-04
AE013599-3727|AAF47098.2| 1043|Drosophila melanogaster CG5594-PA...    44   2e-04
AE013599-3726|AAM68276.1| 1074|Drosophila melanogaster CG5594-PD...    44   2e-04

>AY094735-1|AAM11088.1| 1171|Drosophila melanogaster GH27027p protein.
          Length = 1171

 Score =  108 bits (260), Expect = 5e-24
 Identities = 52/79 (65%), Positives = 59/79 (74%)
 Frame = +3

Query: 222  IXETELTTLSGKTNRQLRLRELLLANSRDSRLIXMSLPMPRKGSVSAPLYMAWLEMMSRD 401
            I + +L  +  KTNR LRLRE L   S  S L+ M+LPMPRK  VSAPLYMAWLE +SRD
Sbjct: 1093 ITDDDLLAVQDKTNRYLRLREYLREQSTKSDLVVMTLPMPRKNIVSAPLYMAWLESLSRD 1152

Query: 402  LPPMLFVRGNHTSVLTFYS 458
            +PP LFVRGN TSVLTFYS
Sbjct: 1153 MPPFLFVRGNQTSVLTFYS 1171


>AE014296-2131|AAS65014.1| 1171|Drosophila melanogaster CG4357-PB,
            isoform B protein.
          Length = 1171

 Score =  108 bits (260), Expect = 5e-24
 Identities = 52/79 (65%), Positives = 59/79 (74%)
 Frame = +3

Query: 222  IXETELTTLSGKTNRQLRLRELLLANSRDSRLIXMSLPMPRKGSVSAPLYMAWLEMMSRD 401
            I + +L  +  KTNR LRLRE L   S  S L+ M+LPMPRK  VSAPLYMAWLE +SRD
Sbjct: 1093 ITDDDLLAVQDKTNRYLRLREYLREQSTKSDLVVMTLPMPRKNIVSAPLYMAWLESLSRD 1152

Query: 402  LPPMLFVRGNHTSVLTFYS 458
            +PP LFVRGN TSVLTFYS
Sbjct: 1153 MPPFLFVRGNQTSVLTFYS 1171


>AE014296-2130|AAF49927.1| 1171|Drosophila melanogaster CG4357-PA,
            isoform A protein.
          Length = 1171

 Score =  108 bits (260), Expect = 5e-24
 Identities = 52/79 (65%), Positives = 59/79 (74%)
 Frame = +3

Query: 222  IXETELTTLSGKTNRQLRLRELLLANSRDSRLIXMSLPMPRKGSVSAPLYMAWLEMMSRD 401
            I + +L  +  KTNR LRLRE L   S  S L+ M+LPMPRK  VSAPLYMAWLE +SRD
Sbjct: 1093 ITDDDLLAVQDKTNRYLRLREYLREQSTKSDLVVMTLPMPRKNIVSAPLYMAWLESLSRD 1152

Query: 402  LPPMLFVRGNHTSVLTFYS 458
            +PP LFVRGN TSVLTFYS
Sbjct: 1153 MPPFLFVRGNQTSVLTFYS 1171


>AY122102-1|AAM52614.1| 1068|Drosophila melanogaster GH09711p protein.
          Length = 1068

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = +3

Query: 222  IXETELTTLSGKTNRQLRLRELLLANSRDSRLIXMSLPMPRKGSVSAPLYMAWLEMMSRD 401
            I + EL ++S KTNRQLR+ EL++ +S ++ L+ MSLPMPRK ++SAPLYM+WLEM++ D
Sbjct: 989  ITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSD 1048

Query: 402  LP-PMLFVRGNHTSVLTFYS 458
            +  P+   RGN T VLT YS
Sbjct: 1049 MKCPVALARGNQTPVLTLYS 1068


>AE014297-262|AAF52018.2|  995|Drosophila melanogaster CG31547-PA,
            isoform A protein.
          Length = 995

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = +3

Query: 222  IXETELTTLSGKTNRQLRLRELLLANSRDSRLIXMSLPMPRKGSVSAPLYMAWLEMMSRD 401
            I + EL ++S KTNRQLR+ EL++ +S ++ L+ MSLPMPRK ++SAPLYM+WLEM++ D
Sbjct: 916  ITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSD 975

Query: 402  LP-PMLFVRGNHTSVLTFYS 458
            +  P+   RGN T VLT YS
Sbjct: 976  MKCPVALARGNQTPVLTLYS 995


>AE014297-261|AAF52017.2| 1068|Drosophila melanogaster CG31547-PB,
            isoform B protein.
          Length = 1068

 Score = 95.1 bits (226), Expect = 6e-20
 Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = +3

Query: 222  IXETELTTLSGKTNRQLRLRELLLANSRDSRLIXMSLPMPRKGSVSAPLYMAWLEMMSRD 401
            I + EL ++S KTNRQLR+ EL++ +S ++ L+ MSLPMPRK ++SAPLYM+WLEM++ D
Sbjct: 989  ITDDELQSMSEKTNRQLRIHELVVKHSSNASLVVMSLPMPRKEAISAPLYMSWLEMLTSD 1048

Query: 402  LP-PMLFVRGNHTSVLTFYS 458
            +  P+   RGN T VLT YS
Sbjct: 1049 MKCPVALARGNQTPVLTLYS 1068


>BT012491-1|AAS93762.1| 1074|Drosophila melanogaster LD02554p protein.
          Length = 1074

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 270  LRLRELLLANSRDSRLIXMSLPMPRKGSVSAPL---YMAWLEMMSRDLPPMLFVRGNHTS 440
            ++L E+++  S+D++L+ M+LP P +  V A     YM +LE+++  L  +L VRG    
Sbjct: 1010 IKLNEVIVEKSQDAQLVIMNLPGPPR-EVRAERERNYMEFLEVLTEGLEKVLMVRGGGRE 1068

Query: 441  VLTFYS 458
            V+T YS
Sbjct: 1069 VITIYS 1074


>AY118761-1|AAM50621.1| 1028|Drosophila melanogaster GH09271p protein.
          Length = 1028

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 270  LRLRELLLANSRDSRLIXMSLPMPRKGSVSAPL---YMAWLEMMSRDLPPMLFVRGNHTS 440
            ++L E+++  S+D++L+ M+LP P +  V A     YM +LE+++  L  +L VRG    
Sbjct: 964  IKLNEVIVEKSQDAQLVIMNLPGPPR-EVRAERERNYMEFLEVLTEGLEKVLMVRGGGRE 1022

Query: 441  VLTFYS 458
            V+T YS
Sbjct: 1023 VITIYS 1028


>AE013599-3729|AAM68277.1| 1028|Drosophila melanogaster CG5594-PB,
            isoform B protein.
          Length = 1028

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 270  LRLRELLLANSRDSRLIXMSLPMPRKGSVSAPL---YMAWLEMMSRDLPPMLFVRGNHTS 440
            ++L E+++  S+D++L+ M+LP P +  V A     YM +LE+++  L  +L VRG    
Sbjct: 964  IKLNEVIVEKSQDAQLVIMNLPGPPR-EVRAERERNYMEFLEVLTEGLEKVLMVRGGGRE 1022

Query: 441  VLTFYS 458
            V+T YS
Sbjct: 1023 VITIYS 1028


>AE013599-3728|AAF47099.2| 1059|Drosophila melanogaster CG5594-PC,
            isoform C protein.
          Length = 1059

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 270  LRLRELLLANSRDSRLIXMSLPMPRKGSVSAPL---YMAWLEMMSRDLPPMLFVRGNHTS 440
            ++L E+++  S+D++L+ M+LP P +  V A     YM +LE+++  L  +L VRG    
Sbjct: 995  IKLNEVIVEKSQDAQLVIMNLPGPPR-EVRAERERNYMEFLEVLTEGLEKVLMVRGGGRE 1053

Query: 441  VLTFYS 458
            V+T YS
Sbjct: 1054 VITIYS 1059


>AE013599-3727|AAF47098.2| 1043|Drosophila melanogaster CG5594-PA,
            isoform A protein.
          Length = 1043

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 270  LRLRELLLANSRDSRLIXMSLPMPRKGSVSAPL---YMAWLEMMSRDLPPMLFVRGNHTS 440
            ++L E+++  S+D++L+ M+LP P +  V A     YM +LE+++  L  +L VRG    
Sbjct: 979  IKLNEVIVEKSQDAQLVIMNLPGPPR-EVRAERERNYMEFLEVLTEGLEKVLMVRGGGRE 1037

Query: 441  VLTFYS 458
            V+T YS
Sbjct: 1038 VITIYS 1043


>AE013599-3726|AAM68276.1| 1074|Drosophila melanogaster CG5594-PD,
            isoform D protein.
          Length = 1074

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 270  LRLRELLLANSRDSRLIXMSLPMPRKGSVSAPL---YMAWLEMMSRDLPPMLFVRGNHTS 440
            ++L E+++  S+D++L+ M+LP P +  V A     YM +LE+++  L  +L VRG    
Sbjct: 1010 IKLNEVIVEKSQDAQLVIMNLPGPPR-EVRAERERNYMEFLEVLTEGLEKVLMVRGGGRE 1068

Query: 441  VLTFYS 458
            V+T YS
Sbjct: 1069 VITIYS 1074


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,649,172
Number of Sequences: 53049
Number of extensions: 433947
Number of successful extensions: 912
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)