Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4h07
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal prote... 180 3e-46
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 30 0.77
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 28 2.4
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 28 2.4
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 2.4
AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical ... 28 2.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 28 3.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 28 3.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 28 3.1
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 28 3.1
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 27 7.2
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 27 7.2
U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am... 27 7.2
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am... 27 7.2
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 27 7.2
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical ... 26 9.5
>U39851-9|AAF99870.1| 247|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 3 protein.
Length = 247
Score = 180 bits (439), Expect = 3e-46
Identities = 81/112 (72%), Positives = 96/112 (85%)
Frame = +1
Query: 1 AVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATR 180
AVRRACYGVLRFIMESGA+G EV+VSGKLRGQRAK+MKFVDGLMIHSG P NDY+ A R
Sbjct: 116 AVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVR 175
Query: 181 HVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 336
HV LRQGV+GIKVKIMLP+D +G+NGP+ PDH+ + EP++E +P EP S+
Sbjct: 176 HVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQ 227
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 29.9 bits (64), Expect = 0.77
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 399 SYILSDSGDRLRQRRGREGAHFAGRLEGH 313
+Y+ +GD LR R REG+ F +E H
Sbjct: 27 NYVHLSAGDLLRAERQREGSEFGALIESH 55
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 28.3 bits (60), Expect = 2.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 396 YILSDSGDRLRQRRGREGAHFAGRLEGH 313
Y+ +GD LR R R G+ + +EGH
Sbjct: 28 YVHLSAGDLLRAERERAGSEYGALIEGH 55
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
F57F4.4 protein.
Length = 2090
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QHCYQTCASQARSTRNQGQNHVA 233
Q CY CAS ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 28.3 bits (60), Expect = 2.4
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 165 QHCYQTCASQARSTRNQGQNHVA 233
Q CY CAS ST Q QNH A
Sbjct: 1799 QGCYGDCASITISTTIQNQNHTA 1821
>AF000261-3|AAB52924.1| 464|Caenorhabditis elegans Hypothetical
protein F19B10.4 protein.
Length = 464
Score = 28.3 bits (60), Expect = 2.4
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +3
Query: 165 QHCYQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRAD 329
Q C Q S +S N + GPA++ RPE P DR + + R D
Sbjct: 113 QSCLQNELSALKSANNAMKTSKN-GPAKEHRPENGKLSPETLDRGKEENQEGRQD 166
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 268 PQPDHILVTEPKDEPVPL---EPTSE 336
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 268 PQPDHILVTEPKDEPVPL---EPTSE 336
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 268 PQPDHILVTEPKDEPVPL---EPTSE 336
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 268 PQPDHILVTEPKDEPVPL---EPTSE 336
P+P+ ++++EP EPVP+ EP E
Sbjct: 468 PEPEPVVISEPVPEPVPIVVEEPPKE 493
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 268 PQPDHILVTEPKDEPVPL---EPTSE 336
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.9 bits (59), Expect = 3.1
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 268 PQPDHILVTEPKDEPVPL---EPTSE 336
P+P+ ++++EP EPVP+ EP E
Sbjct: 1647 PEPEPVVISEPVPEPVPIVVEEPPKE 1672
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 27.9 bits (59), Expect = 3.1
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +3
Query: 192 QARSTRNQGQNHVAVGPARQERPEEATTRP--HPGDRAQGRA 311
Q + R Q GP RQ++P++ + +P PG + QG++
Sbjct: 553 QGPAPRGAPQKPFYQGPPRQQQPQQHSQQPAQQPGQQGQGQS 594
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 311 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 210
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 311 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLI 210
GS L + + +G + GP + CWS G ++ TL+
Sbjct: 234 GSPLYASPEIINGTPYKGPEVDCWSLGILLYTLV 267
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 208 GIKVKIMLPWDQQGKNG-PKKPQPDHIL-VTEPKDEPVPLEPTSEVR 342
G + I P +G G PKKP+P+ ++ V +PK P P + T E R
Sbjct: 379 GSSMSIGTPTKVKGLPGRPKKPKPEGVVTVPKPKGRP-PKKATLEKR 424
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 243 ARQERPEEATTRPHPGDRAQGRARAPRADQ 332
A Q+R ++A H G RA G+ +ADQ
Sbjct: 243 AGQKRTQQADQEQHRGSRAAGQKGTQQADQ 272
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 165 QHCYQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRADQ 332
QH A + + + + H A Q+ ++A H G RA G +ADQ
Sbjct: 333 QHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 124 GLMIHSGDPCNDY 162
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 243 ARQERPEEATTRPHPGDRAQGRARAPRADQ 332
A Q+R ++A H G RA G+ +ADQ
Sbjct: 243 AGQKRTQQADQEQHRGSRAAGQKGTQQADQ 272
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +3
Query: 165 QHCYQTCASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGDRAQGRARAPRADQ 332
QH A + + + + H A Q+ ++A H G RA G +ADQ
Sbjct: 333 QHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/66 (25%), Positives = 25/66 (37%)
Frame = +3
Query: 93 STCQINEVCRWTHDPLWRPLQ*LRQHCYQTCASQARSTRNQGQNHVAVGPARQERPEEAT 272
+TCQ + C T +P+Q + C Q+C Q + N V P Q +
Sbjct: 200 NTCQNS--CLNTCQQQQQPVQQCQSSCDQSCQPQCATPSGSAYNQVNYQPQAQNNYQTNN 257
Query: 273 TRPHPG 290
PG
Sbjct: 258 NYQQPG 263
>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform a protein.
Length = 1212
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 85 LRGQRAKSMKFVDGLMIHSG 144
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
amphipath transporters(subfamily iv p-type atpase)
protein 4, isoform b protein.
Length = 1454
Score = 26.6 bits (56), Expect = 7.2
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +1
Query: 85 LRGQRAKSMKFVDGLMIHSG 144
LRG R K+ FV+G+++++G
Sbjct: 272 LRGSRIKNTTFVEGIVVYAG 291
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 26.6 bits (56), Expect = 7.2
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 124 GLMIHSGDPCNDY 162
GL++H G PCN+Y
Sbjct: 691 GLILHPGSPCNNY 703
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +3
Query: 225 HVAVGPARQERPEEATTRPH--PGDRAQGRARAPRA 326
H + R ERP A++RP G RAR P A
Sbjct: 43 HASTTNTRMERPSTASSRPRTSTGRAPSARARPPSA 78
>AF047655-7|AAC04404.1| 561|Caenorhabditis elegans Hypothetical
protein C17B7.10 protein.
Length = 561
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +1
Query: 109 MKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGP 261
++ +DGLM DP ++ + + L+R GV + + I D++ + P
Sbjct: 74 LQIIDGLMFQLPDPSDETFSKCSEFKLIRTGVAELFLSIAC--DRRSSHSP 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,274,460
Number of Sequences: 27780
Number of extensions: 193263
Number of successful extensions: 685
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 676
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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