Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4h02
(648 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 34 0.100
Z46935-6|CAL36509.1| 128|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical ... 31 0.93
AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical ... 29 3.8
Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical pr... 28 5.0
U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81583-5|CAB04673.1| 574|Caenorhabditis elegans Hypothetical pr... 28 6.6
U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 28 6.6
U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL132902-7|CAB81993.1| 485|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 33.9 bits (74), Expect = 0.100
Identities = 15/54 (27%), Positives = 34/54 (62%)
Frame = +1
Query: 397 EENVQRLIASVQVWKNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLS 558
+++V++ IA+ +++ ++ T + V +G WSD+ G RK+ +L + G F++
Sbjct: 118 QDDVEKDIANTKIYLQIMGTIPTLIVSPLIGNWSDRNG-RKSPLLFSLFGLFIN 170
>Z46935-6|CAL36509.1| 128|Caenorhabditis elegans Hypothetical
protein M106.7 protein.
Length = 128
Score = 31.5 bits (68), Expect = 0.53
Identities = 29/123 (23%), Positives = 53/123 (43%)
Frame = +1
Query: 61 RPQKYLLCNTMAVKDLKVCDDEECSKGSHETCPLKSENVREIKKLTFKQRLKLIKDNTTV 240
+ ++ +L N + L EE +K HE C S + E KK + + N V
Sbjct: 5 KTRETMLTNQEVLSFLNALKKEEDNKQQHERCKQLSTVIYETKK--YLNTSPAVTQNEAV 62
Query: 241 EPIMACYVMPSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLI 420
C ++P LA + + +NL S L + +TE +EE++++L+
Sbjct: 63 ----ICELIPK-LAPFKLTGAETLQV--INLRPSTTADIQLLIEETEERFPSEEDLEKLV 115
Query: 421 ASV 429
++V
Sbjct: 116 STV 118
>AF125971-1|AAD14769.2| 469|Caenorhabditis elegans Hypothetical
protein Y4C6B.5 protein.
Length = 469
Score = 30.7 bits (66), Expect = 0.93
Identities = 24/112 (21%), Positives = 49/112 (43%)
Frame = +1
Query: 259 YVMPSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASVQVW 438
Y++ S L QNL +K C + ++ C ++ + +A N I+S+ +
Sbjct: 17 YMLGSYLNYPVFQNLIYEKECLIKYQQNETFCRNVSAYYDDKDIQAAANHFYFISSLTLL 76
Query: 439 KNVVQTAIPVCVILFVGAWSDKTGKRKACILLPIVGEFLSCLGFIVNTYFFY 594
+ T L +GA +D K +++P +G L + ++ +YF +
Sbjct: 77 CPSLVTT------LLLGAATD-YWSIKIPLIIPYIGCILGTINYVFQSYFIH 121
>AC024090-1|AAF35424.2| 591|Caenorhabditis elegans Hypothetical
protein C52E2.5 protein.
Length = 591
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/70 (20%), Positives = 34/70 (48%)
Frame = +1
Query: 268 PSVLASLAVQNLSLDKACRVNLNYSDEVCTALTLRQTENYTEAEENVQRLIASVQVWKNV 447
P + ++A++ +S +AC +++ S V + ++ + +AS++ W+N
Sbjct: 490 PVAIKTIALRTMSFLEACLQSVDVSRSVLPYSNSTKLNKFSVPDVQSINDLASLEQWRNA 549
Query: 448 VQTAIPVCVI 477
+ I CV+
Sbjct: 550 NELEIENCVV 559
>Z75549-5|CAA99918.1| 364|Caenorhabditis elegans Hypothetical
protein T19C4.5 protein.
Length = 364
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 198 CKLFYFANVF*FQRACFVRSFRALFIVTNFQV 103
C + +F N+F C+VRS F+++N +
Sbjct: 8 CLVLFFGNIFGSSENCYVRSSIFNFLISNLSI 39
>U29097-1|AAA68411.1| 1490|Caenorhabditis elegans Hypothetical protein
F18C5.3 protein.
Length = 1490
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 88 TMAVKDLKVCDDEECSKGSHETCPLKSENVRE 183
++ V++LK DEE SK + E C L + + E
Sbjct: 1379 SLLVRELKTSSDEELSKLTQEVCGLVKKKIGE 1410
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 557 DKNSPTIGSKMHAFLLPVLSLHAPTNNITHTGIAVCTTF-FQTWTLAISLCTFSSASV*F 381
+ + PT S + A++LP+ + P+ + T T + TF Q T + + F
Sbjct: 279 ETSKPTFPSTLPAYVLPMTTTSHPSTHTTTTQKVIARTFASQPHTTSQPKIVVKLLNDSF 338
Query: 380 SVCRNVKAVQTSSE*LRLTLQALSK 306
S KA T S R ++ LS+
Sbjct: 339 SNSTTDKAKSTESSASRASVSELSR 363
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = -2
Query: 557 DKNSPTIGSKMHAFLLPVLSLHAPTNNITHTGIAVCTTF-FQTWTLAISLCTFSSASV*F 381
+ + PT S + A++LP+ + P+ + T T + TF Q T + + F
Sbjct: 279 ETSKPTFPSTLPAYVLPMTTTSHPSTHTTTTQKVIARTFASQPHTTSQPKIVVKLLNDSF 338
Query: 380 SVCRNVKAVQTSSE*LRLTLQALSK 306
S KA T S R ++ LS+
Sbjct: 339 SNSTTDKAKSTESSASRASVSELSR 363
>Z81583-5|CAB04673.1| 574|Caenorhabditis elegans Hypothetical
protein T02G6.5 protein.
Length = 574
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +1
Query: 97 VKDLKVCDDEECSKGSHETCPLKSENV-REIKKLTFKQRLKLIKDN-TTVEPIMACYVMP 270
V + +CD + S+ S TC LK++ V R+I KL KL +N T +P+ YV+
Sbjct: 248 VLQMDICDMLQLSRTSSNTC-LKTKKVNRKIYKLMISDP-KLHDNNLITEDPLRQVYVIE 305
Query: 271 S 273
S
Sbjct: 306 S 306
>U42830-2|AAC48274.1| 243|Caenorhabditis elegans Hypothetical
protein C53B7.3 protein.
Length = 243
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 348 GLHGFNITTNGKLHGGGRKRTKTDSECPSLEKRCANGY 461
G G+N +G +G R +S+C S + C++GY
Sbjct: 195 GSSGYNTYGSGNTYGSSNSRCTYNSDCGS-NRYCSSGY 231
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = -1
Query: 474 HTYWYSRLH-NVFPNLDTRYQSLYVFFRLRVVFRLS 370
H Y+Y R H ++ PN+ ++ + V R+R++F LS
Sbjct: 42 HIYYYIRFHEHIAPNI-AKWDNFNVTTRIRMMFALS 76
>U64858-7|AAB18285.2| 340|Caenorhabditis elegans Hypothetical
protein C16D9.6 protein.
Length = 340
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/46 (23%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -1
Query: 549 FTNYRQQNARFSFTSLVAPRPDE*YHTYWYSR--LHNVFPNLDTRY 418
FT+ R + R ++++ PD+ Y+ ++ SR H+++ N+ + +
Sbjct: 130 FTSERFNDTRIPYSTVFKGIPDDYYNLFFKSRYAFHHIYTNISSEF 175
>AL132902-7|CAB81993.1| 485|Caenorhabditis elegans Hypothetical
protein Y71A12B.8 protein.
Length = 485
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 148 REILSSTLHRHKLSGL*QPLYCIIDTFVVDSEF-NENQTV 32
RE+ +TLH+H L L L+ +D+ V S+ N NQ V
Sbjct: 83 RELKGTTLHKHDLKHLAVSLHSSLDSVKVGSKAENVNQEV 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,188,847
Number of Sequences: 27780
Number of extensions: 334806
Number of successful extensions: 1030
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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