Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4g13
         (712 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79865-1|CAA56249.1|  198|Homo sapiens mitochondrial ribosomal p...    79   2e-14
BC007497-1|AAH07497.1|  198|Homo sapiens mitochondrial ribosomal...    79   2e-14
BC002344-1|AAH02344.1|  198|Homo sapiens mitochondrial ribosomal...    79   2e-14
AF105278-1|AAD16894.1|   99|Homo sapiens 5c5-2 protein protein.        79   2e-14
AF059736-1|AAG32154.1|  198|Homo sapiens mitoribosomal protein L...    79   2e-14
AB051337-1|BAB54927.1|   59|Homo sapiens mitochondrial ribosomal...    69   1e-11

>X79865-1|CAA56249.1|  198|Homo sapiens mitochondrial ribosomal
           protein L7L12 protein.
          Length = 198

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 417 TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA 596
           T FTV++T+     KV LIKE+K  ++G NLVQAKK VES+P  +KA+++K EAEK+K A
Sbjct: 128 THFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAA 187

Query: 597 LTKVGAIIEIE 629
           L  VG  + +E
Sbjct: 188 LEAVGGTVVLE 198


>BC007497-1|AAH07497.1|  198|Homo sapiens mitochondrial ribosomal
           protein L12 protein.
          Length = 198

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 417 TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA 596
           T FTV++T+     KV LIKE+K  ++G NLVQAKK VES+P  +KA+++K EAEK+K A
Sbjct: 128 THFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAA 187

Query: 597 LTKVGAIIEIE 629
           L  VG  + +E
Sbjct: 188 LEAVGGTVVLE 198


>BC002344-1|AAH02344.1|  198|Homo sapiens mitochondrial ribosomal
           protein L12 protein.
          Length = 198

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 417 TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA 596
           T FTV++T+     KV LIKE+K  ++G NLVQAKK VES+P  +KA+++K EAEK+K A
Sbjct: 128 THFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAA 187

Query: 597 LTKVGAIIEIE 629
           L  VG  + +E
Sbjct: 188 LEAVGGTVVLE 198


>AF105278-1|AAD16894.1|   99|Homo sapiens 5c5-2 protein protein.
          Length = 99

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 417 TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA 596
           T FTV++T+     KV LIKE+K  ++G NLVQAKK VES+P  +KA+++K EAEK+K A
Sbjct: 29  THFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAA 88

Query: 597 LTKVGAIIEIE 629
           L  VG  + +E
Sbjct: 89  LEAVGGTVVLE 99


>AF059736-1|AAG32154.1|  198|Homo sapiens mitoribosomal protein L12
           protein.
          Length = 198

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 417 TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEA 596
           T FTV++T+     KV LIKE+K  ++G NLVQAKK VES+P  +KA+++K EAEK+K A
Sbjct: 128 THFTVRLTEAKPVDKVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAA 187

Query: 597 LTKVGAIIEIE 629
           L  VG  + +E
Sbjct: 188 LEAVGGTVVLE 198


>AB051337-1|BAB54927.1|   59|Homo sapiens mitochondrial ribosomal
           protein L7/L12 protein.
          Length = 59

 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 32/57 (56%), Positives = 43/57 (75%)
 Frame = +3

Query: 459 KVALIKEVKGLLEGFNLVQAKKFVESVPTVVKADISKDEAEKLKEALTKVGAIIEIE 629
           KV LIKE+K  ++G NLVQAKK VES+P  +KA+++K EAEK+K AL  VG  + +E
Sbjct: 3   KVKLIKEIKNYIQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE 59


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,744,194
Number of Sequences: 237096
Number of extensions: 875087
Number of successful extensions: 1452
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)