Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4g08
(757 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomy... 29 0.54
SPBP35G2.12 |||nucleoside diphosphate-sugar hydrolase |Schizosac... 29 0.72
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 29 0.95
SPAC13G6.14 |aps1|SPAC24B11.03|diadenosine 5',5'''-p1,p6-hexapho... 28 1.3
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|... 28 1.7
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 28 1.7
SPAC1039.04 |||nicotinic acid plasma membrane transporter |Schiz... 27 2.2
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 26 6.7
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy... 26 6.7
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch... 26 6.7
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 26 6.7
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 26 6.7
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 6.7
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 8.8
>SPAC11H11.04 |mam2||pheromone p-factor receptor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 348
Score = 29.5 bits (63), Expect = 0.54
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = -1
Query: 469 LTNFFTRIHHTTWYSPLSSVT------PFYSYKL*YRFIIYTHSHISIVKSF 332
+TN +I + W +PLSS T P++ K+ + F I HS + K F
Sbjct: 179 ITNMCQQIQYLLWLTPLSSKTIVGYSWPYFIAKILFAFSIIFHSGVFSYKLF 230
>SPBP35G2.12 |||nucleoside diphosphate-sugar hydrolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 205
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 428 IPGGMVDPGEKVSETAIREFKEE 496
IP G+VD E + AIRE +EE
Sbjct: 87 IPAGLVDSKESCEDAAIRELREE 109
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 28.7 bits (61), Expect = 0.95
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 608 TDNSWIETIAYNFHDESGLTVGLLKLHA 691
TD + ++TIAYN+ ++ T+G K H+
Sbjct: 442 TDYAGLKTIAYNYQNDPKATLGFSKKHS 469
>SPAC13G6.14 |aps1|SPAC24B11.03|diadenosine
5',5'''-p1,p6-hexaphosphate hydrolase Aps1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 210
Score = 28.3 bits (60), Expect = 1.3
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 335 RLDNGNMAVGVNNKPILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAIREFKEE 496
RL G +A+ + + +L + K+ + W +P G + E V + A+RE EE
Sbjct: 42 RLAAGVVALSADKRKVLLVSSAKKHPS--WVVPKGGWEADESVQQAALREGWEE 93
>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 376
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 404 RGDTGEWAIPGGMVDPGEKVSETAIREFKEEA 499
R G +A G ++PGE + E +RE EE+
Sbjct: 248 RHPKGLYACLAGFLEPGESLEEAVVRETYEES 279
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 561 LKNSSISFSHCILSARLNELRASSLNSLIAVSLTFSPGS 445
L +++ S S LSA +N+L ++S + L+ S+ +PGS
Sbjct: 114 LPSTNASHSEVSLSAGVNDLNSNSEHDLLPKSVNKTPGS 152
>SPAC1039.04 |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 467 ETAIREFKEEALNSLSLADKIQWEKEIDEFFSEGE-VIYQGYVDD 598
E +I + ++NS DK +W++++ F EGE V + Y+ D
Sbjct: 2 EKSISSISKASMNSDEKLDKKEWDQQLPIDFGEGEDVTTEVYILD 46
>SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1369
Score = 25.8 bits (54), Expect = 6.7
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 741 KVRSNVNPNVPLQHHLPA*SFNKPTVKPLSSWKLYAMVSIQELSVF 604
K +V+P+ L + LP ++ KP K +S +L I L VF
Sbjct: 896 KKSKDVDPDDDLVNQLPLNAYTKPRYKSAASTRLNIYQRILYLKVF 941
>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 516
Score = 25.8 bits (54), Expect = 6.7
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 194 RVSYNGPYQIVNGF-PLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDNGNMAVGVN 370
RV+ G Y+ +GF + P+G T + ++ P + + ++ R K L AV N
Sbjct: 410 RVALLGRYE--HGFMSMIPVGATNV--GSIVINCDPTLSTNRLVLRKKSLGTFQEAVYKN 465
Query: 371 NKPILQFIAIKRGD 412
P+L + + RG+
Sbjct: 466 ASPVLDGMPVSRGE 479
>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1133
Score = 25.8 bits (54), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 743 LKSGVMSTPTYPYSIISXHEVLINQQLNHSH 651
LKS V+ T T P II+ + VL+++ SH
Sbjct: 611 LKSCVIDTSTAPLIIITSYGVLLSEFSQQSH 641
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 25.8 bits (54), Expect = 6.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 179 DGNISRVSYNGPYQIVNG 232
DGN+ R++Y+G + NG
Sbjct: 197 DGNVQRLTYDGTVDVFNG 214
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 6.7
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Frame = -2
Query: 507 ELRASSLNSLIAVSLTFSPGSTIPPGIA---HSPVS----PRFIAINC-----NIGLLFT 364
+L A++ + +AV+ P ST+PPG + +P S P IA N+ L+
Sbjct: 192 KLAAAAKKNKVAVT----PQSTLPPGFSPATPAPTSAANTPATIAATSIPPVPNVPLVGA 247
Query: 363 PTAIFPLSSLFQRLIIGSAA*LGPHRPKTPRPQIPVRPRG 244
TA+ PLS ++ +AA P P P +P+ P G
Sbjct: 248 TTAVPPLS--IPNVLPFTAAQHFPGMPAMPMMNVPMGPGG 285
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.8 bits (54), Expect = 6.7
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 561 LKNSSISFSHCILSARLNELRASSLNSLIAVSLTFSPGSTIPPGIAHSPVSPRFIAIN 388
L S+ S S S + +SSL+S I V +FS S + S VSP +I+
Sbjct: 3636 LSTSAFSSSSSEPSTLDYSVSSSSLSSSIGVGSSFSSNSKVTSNKVPSTVSPHSSSIS 3693
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.4 bits (53), Expect = 8.8
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 461 VSETAIREFKEEALNSLSLADKIQ-WEKEIDEFFSE 565
V E +R+F E L+ L+ DK++ W K+ + +
Sbjct: 3202 VREAFLRDFVETKLDLLTYVDKLRMWRKKFENILDQ 3237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,241,100
Number of Sequences: 5004
Number of extensions: 72434
Number of successful extensions: 200
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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