Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4g08
         (757 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122264-1|AAM52776.1|  311|Drosophila melanogaster SD14666p pro...   248   5e-66
AE014296-2771|AAF49436.1|  307|Drosophila melanogaster CG4098-PA...   248   5e-66
AE014296-2769|AAF49438.4|  598|Drosophila melanogaster CG18217-P...   145   7e-35
BT022341-1|AAY54757.1|  158|Drosophila melanogaster IP04485p pro...    37   0.034
BT022318-1|AAY54734.1|  144|Drosophila melanogaster IP04585p pro...    37   0.034
BT022285-1|AAY54701.1|  142|Drosophila melanogaster IP04685p pro...    37   0.034
AY907540-1|AAX68972.1|  142|Drosophila melanogaster diadenosine ...    37   0.034
AY118969-1|AAM50829.1|  177|Drosophila melanogaster LD46602p pro...    36   0.060
AY070551-1|AAL48022.1|  340|Drosophila melanogaster LD28119p pro...    36   0.060
AJ863564-1|CAI10731.1|  177|Drosophila melanogaster hydrolase pr...    36   0.060
AJ863563-1|CAI10730.1|  177|Drosophila melanogaster hydrolase pr...    36   0.060
AJ863562-1|CAI10729.1|  177|Drosophila melanogaster hydrolase pr...    36   0.060
AJ863561-1|CAI10728.1|  177|Drosophila melanogaster hydrolase pr...    36   0.060
AE014297-1313|AAF54653.1|  340|Drosophila melanogaster CG10898-P...    36   0.060
AE014296-1864|AAN11889.1|  177|Drosophila melanogaster CG6391-PC...    36   0.060
AE014296-1863|AAF50123.1|  177|Drosophila melanogaster CG6391-PB...    36   0.060
AE014296-1862|AAN11888.1|  177|Drosophila melanogaster CG6391-PA...    36   0.060
AY047526-1|AAK77258.1|  330|Drosophila melanogaster GH03273p pro...    36   0.079
AE014298-2189|AAF48489.1|  330|Drosophila melanogaster CG8128-PA...    36   0.079
BT010262-1|AAQ23580.1|  239|Drosophila melanogaster RE28434p pro...    34   0.18 
AY094860-1|AAM11213.1|  439|Drosophila melanogaster RE19693p pro...    31   1.7  
AE014297-2413|AAF55472.3|  439|Drosophila melanogaster CG17802-P...    31   1.7  
AE013599-1502|AAF58503.1|  633|Drosophila melanogaster CG8550-PA...    31   1.7  
BT001897-1|AAN71686.1|  407|Drosophila melanogaster SD19533p pro...    29   6.8  
AY118879-1|AAM50739.1|  228|Drosophila melanogaster HL01025p pro...    29   6.8  
AF145668-1|AAD38643.1|  778|Drosophila melanogaster BcDNA.GH1167...    29   6.8  
AE014297-3753|AAF56434.2|  778|Drosophila melanogaster CG10506-P...    29   6.8  
AE013599-2542|AAF57807.1|  407|Drosophila melanogaster CG6410-PA...    29   6.8  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   9.1  

>AY122264-1|AAM52776.1|  311|Drosophila melanogaster SD14666p
           protein.
          Length = 311

 Score =  248 bits (608), Expect = 5e-66
 Identities = 118/217 (54%), Positives = 145/217 (66%), Gaps = 2/217 (0%)
 Frame = +2

Query: 47  DKVDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIV 226
           ++V WS  +  Y PP YT P + G+ +ADP +    F P WN +DG ++R S++G Y + 
Sbjct: 64  EQVFWSEPFPDYCPPAYTAPHIGGQVWADPPLPSDTFWPQWNQLDGQVNRESFHGAYNVQ 123

Query: 227 NGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDNGNMAVG-VNNKPILQFIAIK 403
           NG PLNP+GRTG+ GRG LGRWGPNHAADPI++RWKR D G +       K I+Q +AI+
Sbjct: 124 NGLPLNPIGRTGLTGRGSLGRWGPNHAADPIVTRWKRDDQGAIVANPTTGKNIIQMVAIQ 183

Query: 404 RGDTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWEKEIDEFFSEGEV-IY 580
           R D   WAIPGGMVDPGE VS T  REF EEALN     DK      ++ FF  G V +Y
Sbjct: 184 RSDNKLWAIPGGMVDPGENVSVTLKREFTEEALN---FTDKANM---VERFFQAGGVQVY 237

Query: 581 QGYVDDCRNTDNSWIETIAYNFHDESGLTVGLLKLHA 691
           QGYVDD RNTDN+W+ET A NFHDE G  VG L+L A
Sbjct: 238 QGYVDDFRNTDNAWMETTALNFHDEDGSQVGQLELMA 274


>AE014296-2771|AAF49436.1|  307|Drosophila melanogaster CG4098-PA
           protein.
          Length = 307

 Score =  248 bits (608), Expect = 5e-66
 Identities = 118/217 (54%), Positives = 145/217 (66%), Gaps = 2/217 (0%)
 Frame = +2

Query: 47  DKVDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIV 226
           ++V WS  +  Y PP YT P + G+ +ADP +    F P WN +DG ++R S++G Y + 
Sbjct: 60  EQVFWSEPFPDYCPPAYTAPHIGGQVWADPPLPSDTFWPQWNQLDGQVNRESFHGAYNVQ 119

Query: 227 NGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDNGNMAVG-VNNKPILQFIAIK 403
           NG PLNP+GRTG+ GRG LGRWGPNHAADPI++RWKR D G +       K I+Q +AI+
Sbjct: 120 NGLPLNPIGRTGLTGRGSLGRWGPNHAADPIVTRWKRDDQGAIVANPTTGKNIIQMVAIQ 179

Query: 404 RGDTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWEKEIDEFFSEGEV-IY 580
           R D   WAIPGGMVDPGE VS T  REF EEALN     DK      ++ FF  G V +Y
Sbjct: 180 RSDNKLWAIPGGMVDPGENVSVTLKREFTEEALN---FTDKANM---VERFFQAGGVQVY 233

Query: 581 QGYVDDCRNTDNSWIETIAYNFHDESGLTVGLLKLHA 691
           QGYVDD RNTDN+W+ET A NFHDE G  VG L+L A
Sbjct: 234 QGYVDDFRNTDNAWMETTALNFHDEDGSQVGQLELMA 270


>AE014296-2769|AAF49438.4|  598|Drosophila melanogaster CG18217-PA
           protein.
          Length = 598

 Score =  145 bits (351), Expect = 7e-35
 Identities = 76/134 (56%), Positives = 88/134 (65%), Gaps = 2/134 (1%)
 Frame = +2

Query: 296 PNHAADPIISRWKRLDNGNMAVG-VNNKPILQFIAIKRGDTGEWAIPGGMVDPGEKVSET 472
           PN AADPI++RWKR D G +       K I+Q +AI+R D   WAIPGGMVDPGE VS T
Sbjct: 434 PNPAADPIVTRWKRDDQGAIVANPTTGKNIIQMVAIQRSDNKLWAIPGGMVDPGENVSVT 493

Query: 473 AIREFKEEALNSLSLADKIQWEKEIDEFFSEGEV-IYQGYVDDCRNTDNSWIETIAYNFH 649
             REF EEALN     DK      ++ FF  G V +YQGYVDD RNTDN+W+ET A NFH
Sbjct: 494 LKREFTEEALN---FTDKANM---VERFFQAGGVQVYQGYVDDFRNTDNAWMETTALNFH 547

Query: 650 DESGLTVGLLKLHA 691
           DE G  VG L+L A
Sbjct: 548 DEDGSQVGQLELMA 561


>BT022341-1|AAY54757.1|  158|Drosophila melanogaster IP04485p
           protein.
          Length = 158

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 383 LQFIAIKRG-DTGEWAIPGGMVDPGEKVSETAIREFKEEA 499
           +Q++ +K    +  W+ P G VDPGE    TA+RE KEEA
Sbjct: 33  IQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALRETKEEA 72


>BT022318-1|AAY54734.1|  144|Drosophila melanogaster IP04585p
           protein.
          Length = 144

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 383 LQFIAIKRG-DTGEWAIPGGMVDPGEKVSETAIREFKEEA 499
           +Q++ +K    +  W+ P G VDPGE    TA+RE KEEA
Sbjct: 19  IQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALRETKEEA 58


>BT022285-1|AAY54701.1|  142|Drosophila melanogaster IP04685p
           protein.
          Length = 142

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 383 LQFIAIKRG-DTGEWAIPGGMVDPGEKVSETAIREFKEEA 499
           +Q++ +K    +  W+ P G VDPGE    TA+RE KEEA
Sbjct: 17  IQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALRETKEEA 56


>AY907540-1|AAX68972.1|  142|Drosophila melanogaster diadenosine
           tetraphosphate hydrolaseprotein.
          Length = 142

 Score = 36.7 bits (81), Expect = 0.034
 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 383 LQFIAIKRG-DTGEWAIPGGMVDPGEKVSETAIREFKEEA 499
           +Q++ +K    +  W+ P G VDPGE    TA+RE KEEA
Sbjct: 17  IQYLLLKASYGSFHWSSPKGHVDPGEDDFTTALRETKEEA 56


>AY118969-1|AAM50829.1|  177|Drosophila melanogaster LD46602p
           protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AY070551-1|AAL48022.1|  340|Drosophila melanogaster LD28119p
           protein.
          Length = 340

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 380 ILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAIRE-FKEEALNS 508
           +L     K+   G+W +P G ++ GE ++E A RE F+E  LN+
Sbjct: 72  LLMIEEAKQSCAGKWYLPAGRMERGESITEAAAREVFEETGLNA 115


>AJ863564-1|CAI10731.1|  177|Drosophila melanogaster hydrolase
           protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AJ863563-1|CAI10730.1|  177|Drosophila melanogaster hydrolase
           protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AJ863562-1|CAI10729.1|  177|Drosophila melanogaster hydrolase
           protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AJ863561-1|CAI10728.1|  177|Drosophila melanogaster hydrolase
           protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AE014297-1313|AAF54653.1|  340|Drosophila melanogaster CG10898-PA
           protein.
          Length = 340

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 380 ILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAIRE-FKEEALNS 508
           +L     K+   G+W +P G ++ GE ++E A RE F+E  LN+
Sbjct: 72  LLMIEEAKQSCAGKWYLPAGRMERGESITEAAAREVFEETGLNA 115


>AE014296-1864|AAN11889.1|  177|Drosophila melanogaster CG6391-PC,
           isoform C protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AE014296-1863|AAF50123.1|  177|Drosophila melanogaster CG6391-PB,
           isoform B protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AE014296-1862|AAN11888.1|  177|Drosophila melanogaster CG6391-PA,
           isoform A protein.
          Length = 177

 Score = 35.9 bits (79), Expect = 0.060
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = +2

Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
           W +PGG V+P E+ S TA+RE  EEA
Sbjct: 46  WIVPGGGVEPEEESSVTAVREVLEEA 71


>AY047526-1|AAK77258.1|  330|Drosophila melanogaster GH03273p
           protein.
          Length = 330

 Score = 35.5 bits (78), Expect = 0.079
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
 Frame = +2

Query: 212 PYQIVNGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDN-GNMAVGVNNKPIL- 385
           P    NGF  +   +TG+    V+ RW P H +  + +    L   G + +   ++ ++ 
Sbjct: 123 PILAENGFDFHH-AKTGVV---VMYRWLPEHESSNLPTYAHTLMGVGGLVINEQDEVLVV 178

Query: 386 --QFIAIKRGDTGEWAIPGGMVDPGEKVSETAIREFKEE 496
             +F  I       W +PGG V+P E + + AIRE  EE
Sbjct: 179 SDRFAMIPNS----WKLPGGYVEPRENLIDAAIREVAEE 213


>AE014298-2189|AAF48489.1|  330|Drosophila melanogaster CG8128-PA
           protein.
          Length = 330

 Score = 35.5 bits (78), Expect = 0.079
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
 Frame = +2

Query: 212 PYQIVNGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDN-GNMAVGVNNKPIL- 385
           P    NGF  +   +TG+    V+ RW P H +  + +    L   G + +   ++ ++ 
Sbjct: 123 PILAENGFDFHH-AKTGVV---VMYRWLPEHESSNLPTYAHTLMGVGGLVINEQDEVLVV 178

Query: 386 --QFIAIKRGDTGEWAIPGGMVDPGEKVSETAIREFKEE 496
             +F  I       W +PGG V+P E + + AIRE  EE
Sbjct: 179 SDRFAMIPNS----WKLPGGYVEPRENLIDAAIREVAEE 213


>BT010262-1|AAQ23580.1|  239|Drosophila melanogaster RE28434p
           protein.
          Length = 239

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 6/55 (10%)
 Frame = +2

Query: 296 PNHAADPIISRWKRLDNGNMAVGVNNKPILQFIAIKRGDTG------EWAIPGGM 442
           PN AADPI++RWKR D G +          +++      T       EW+IP  M
Sbjct: 172 PNPAADPIVTRWKRDDQGAIVANPTTGISYRWLPYSGPTTSCGPFPVEWSIPARM 226


>AY094860-1|AAM11213.1|  439|Drosophila melanogaster RE19693p
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +2

Query: 359 VGVNNKPILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWE 538
           +  NN+  +Q  +++  D G WA P      G K+++    E ++E L  +S AD    E
Sbjct: 68  IKTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDA---EVEQEVLYEVSYADNEGLE 124

Query: 539 KEIDEFFSEGE 571
           ++ D +  E E
Sbjct: 125 EDHDLYKKEEE 135


>AE014297-2413|AAF55472.3|  439|Drosophila melanogaster CG17802-PA
           protein.
          Length = 439

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +2

Query: 359 VGVNNKPILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWE 538
           +  NN+  +Q  +++  D G WA P      G K+++    E ++E L  +S AD    E
Sbjct: 68  IKTNNRLTIQRRSVEAKDDGCWADPLSDAHEGLKINDA---EVEQEVLYEVSYADNEGLE 124

Query: 539 KEIDEFFSEGE 571
           ++ D +  E E
Sbjct: 125 EDHDLYKKEEE 135


>AE013599-1502|AAF58503.1|  633|Drosophila melanogaster CG8550-PA
           protein.
          Length = 633

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/98 (20%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
 Frame = +2

Query: 299 NHAADPIISRWKRLDNGNMAVGVNNKPILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAI 478
           N   + ++++W       +  G+N   I + + +   D+  W I   M DP ++ S+  +
Sbjct: 114 NPRPEELVNQWILHPKKFLVYGLNGVFIDERVDVAANDSMRWVIQLRMPDPADRYSDRRV 173

Query: 479 REFK---EEALNSLSLADKIQWEKEI-DEFFSEGEVIY 580
            +     EEA  S+ +   ++   ++ D++ +E  V+Y
Sbjct: 174 LQLMRLYEEAWYSMGVVKLVEKMHQLQDKYRAEYPVVY 211


>BT001897-1|AAN71686.1|  407|Drosophila melanogaster SD19533p
           protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 SHCILSARLNELRASSLNSLIAVSLTFSPGSTIPP 433
           S C L    +  R +  NS+ A  +T S GS +PP
Sbjct: 181 SECSLGYSQSSSRHTGSNSMFASQMTLSSGSVVPP 215


>AY118879-1|AAM50739.1|  228|Drosophila melanogaster HL01025p
           protein.
          Length = 228

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 SHCILSARLNELRASSLNSLIAVSLTFSPGSTIPP 433
           S C L    +  R +  NS+ A  +T S GS +PP
Sbjct: 2   SECSLGYSQSSSRHTGSNSMFASQMTLSSGSVVPP 36


>AF145668-1|AAD38643.1|  778|Drosophila melanogaster BcDNA.GH11673
           protein.
          Length = 778

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 428 IPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWEK 541
           +PGG +    + S + +  F + ALN   + DK Q+E+
Sbjct: 711 VPGGFLSDISEQSMSVVVAFADRALNQAKVYDKFQFER 748


>AE014297-3753|AAF56434.2|  778|Drosophila melanogaster CG10506-PA
           protein.
          Length = 778

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 428 IPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWEK 541
           +PGG +    + S + +  F + ALN   + DK Q+E+
Sbjct: 711 VPGGFLSDISEQSMSVVVAFADRALNQAKVYDKFQFER 748


>AE013599-2542|AAF57807.1|  407|Drosophila melanogaster CG6410-PA
           protein.
          Length = 407

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -2

Query: 537 SHCILSARLNELRASSLNSLIAVSLTFSPGSTIPP 433
           S C L    +  R +  NS+ A  +T S GS +PP
Sbjct: 181 SECSLGYSQSSSRHTGSNSMFASQMTLSSGSVVPP 215


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
            protein.
          Length = 2284

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +2

Query: 2    TARVCVTP*KKNCYYDKVDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPNFEP 163
            TAR  +   +  CY    D   +   Y PP    P    KP   P   DP+ +P
Sbjct: 2025 TARTTIPTVRPRCYPGSNDPDCQPSTYTPPVTKTPITTPKPRCYPGSSDPSCQP 2078


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,102,744
Number of Sequences: 53049
Number of extensions: 775204
Number of successful extensions: 2095
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2083
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)