Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4g08
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family pr... 225 2e-59
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 44 2e-04
U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family pr... 40 0.003
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 36 0.023
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 35 0.072
AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical ... 35 0.072
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 34 0.095
AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family ... 32 0.38
Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.67
AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical ... 31 0.67
Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z48582-2|CAA88466.2| 228|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 4.7
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 28 6.2
Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical pr... 28 8.2
AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical... 28 8.2
AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical ... 28 8.2
>U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family
protein 6 protein.
Length = 260
Score = 225 bits (551), Expect = 2e-59
Identities = 110/206 (53%), Positives = 142/206 (68%), Gaps = 2/206 (0%)
Frame = +2
Query: 53 VDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQI--V 226
V WS E+ YNPP +T P + G +ADPEI + F+P WN+IDG I+RVSY Y V
Sbjct: 30 VKWSQEWSGYNPPAHTDPKVDGAVWADPEIDEKTFQPSWNAIDGKINRVSYVCQYSFDPV 89
Query: 227 NGFPLNPLGRTGICGRGVLGRWGPNHAADPIISRWKRLDNGNMAVGVNNKPILQFIAIKR 406
PLNP+GRTG+ GRG+LGRWGPNHAADPI+SR DNG+ L+F+A++R
Sbjct: 90 TLRPLNPIGRTGLSGRGLLGRWGPNHAADPIVSRTN--DNGD----------LEFVAVQR 137
Query: 407 GDTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLADKIQWEKEIDEFFSEGEVIYQG 586
D GEWAIPGGMVD GE VS+T REF EEA++ + D + +DE ++ G+ +Y+G
Sbjct: 138 HDNGEWAIPGGMVDAGEHVSQTLRREFAEEAMH--GIVD----SENLDELWNNGKELYRG 191
Query: 587 YVDDCRNTDNSWIETIAYNFHDESGL 664
YVDD RNTDN+W+ET+ +NFHD GL
Sbjct: 192 YVDDPRNTDNAWMETVVFNFHDSKGL 217
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 59 WSTEYKQYNPPNYTFPG----LHGKPYAD--PEIGDPNFEPLWNSIDGNISRVSYNGPYQ 220
W+ +YNPP Y P + Y D E + +W S N S + ++
Sbjct: 1181 WTVLVPRYNPPFYCKPAEDFPSDVQKYVDIATEQNVGELKRIWRSRQANDVTSSNDKCWK 1240
Query: 221 I-VNGFPLNPLGRTGICGRGVLGRWGPN 301
+ GFPLNP GRTG+ GRG R+G N
Sbjct: 1241 LSAAGFPLNPNGRTGMAGRGNHPRFGAN 1268
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = +2
Query: 59 WSTEYKQYNPPNYTFPG----LHGKPYAD--PEIGDPNFEPLWNSIDGNISRVSYNGPYQ 220
W+ +YNPP Y P + Y D E + +W S N S + ++
Sbjct: 790 WTVLVPRYNPPFYCKPAEDFPSDVQKYVDIATEQNVGELKRIWRSRQANDVTSSNDKCWK 849
Query: 221 I-VNGFPLNPLGRTGICGRGVLGRWGPN 301
+ GFPLNP GRTG+ GRG R+G N
Sbjct: 850 LSAAGFPLNPNGRTGMAGRGNHPRFGAN 877
>U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family
protein 3 protein.
Length = 188
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 404 RGDTGEWAIPGGMVDPGEKVSETAIRE-FKEEALNSLSL 517
R GE PGG +DPGE +ETA+RE F+E +N+ S+
Sbjct: 26 RSHRGEVCFPGGRMDPGETTTETALRETFEEIGVNAESV 64
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 401 KRGDTGEWAIPGGMVDPGEKVSETAIREFKEE 496
K+ G+W +P G V+ GE + E +RE KEE
Sbjct: 97 KKSCRGKWYMPAGRVEAGETIEEAVVREVKEE 128
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +2
Query: 101 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 280
FPGLHG+P + G+ F N IDG+ +G Y G P P G TG G
Sbjct: 520 FPGLHGEPGMRGQQGEVGF----NGIDGDCGEPGLDG-YPGAPGAPGAP-GETGFGFPGQ 573
Query: 281 LGRWGPN 301
+G GPN
Sbjct: 574 VGYPGPN 580
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +2
Query: 101 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 280
FPGLHG+P + G+ F N IDG+ +G Y G P P G TG G
Sbjct: 777 FPGLHGEPGMRGQQGEVGF----NGIDGDCGEPGLDG-YPGAPGAPGAP-GETGFGFPGQ 830
Query: 281 LGRWGPN 301
+G GPN
Sbjct: 831 VGYPGPN 837
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2
Query: 422 WAIPGGMVDPGEKVSETAIREFKEEA 499
W P G VDPGE + AIRE KEEA
Sbjct: 32 WTPPKGHVDPGEDEWQAAIRETKEEA 57
>AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical
protein Y92H12BL.5 protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 410 DTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLADKI 529
D G+W +PGG ++ E E A RE EEA ++ KI
Sbjct: 49 DGGKWVVPGGGIEKDECAEEAAHRELMEEAGVRATILKKI 88
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 34.3 bits (75), Expect = 0.095
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = +2
Query: 101 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 280
FPGLHG+P + G+ F N IDG+ +G Y G P P G TG G
Sbjct: 776 FPGLHGEPGMRGQQGEVGF----NGIDGDCGEPGLDG-YPGAPGAPGAP-GETGFGFPGQ 829
Query: 281 LGRWGPN 301
G GPN
Sbjct: 830 DGYPGPN 836
>AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family
protein 2 protein.
Length = 223
Score = 32.3 bits (70), Expect = 0.38
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 428 IPGGMVDPGEKVSETAIREFKEE 496
+P G++D GE + AIRE KEE
Sbjct: 108 LPAGLIDAGETAQQAAIRELKEE 130
>Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 294 PHRPKTPRPQIPVRPRG 244
PHRP+ PRP P PRG
Sbjct: 52 PHRPRPPRPSRPTTPRG 68
>AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 294 PHRPKTPRPQIPVRPRG 244
PHRP+ PRP P PRG
Sbjct: 52 PHRPRPPRPSRPTTPRG 68
>Z74026-4|CAA98416.5| 774|Caenorhabditis elegans Hypothetical
protein B0240.2 protein.
Length = 774
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -1
Query: 610 SIPTVIHITLIYYFTFTKEFIYFFLPLYLI 521
SI T+IH+ LI+ F K YF + ++++
Sbjct: 112 SISTIIHVFLIFTLIFPKMMTYFMISIHVM 141
>Z48582-2|CAA88466.2| 228|Caenorhabditis elegans Hypothetical
protein F27E5.4 protein.
Length = 228
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -2
Query: 540 FSHCILSARLNELRASSLNSLIAVSLTFSPGSTIPP 433
FS+C +AR ++L + ++L+ V L +PG T+ P
Sbjct: 154 FSNCTCTARDDQLCTNLKDNLLGVCLKNTPGVTLSP 189
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.7
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 507 ELRASSLNSLIAVSLTFSPGSTIPPGIAHSP-VSPRFIAINCNIGLLFTPTAIFPLSSLF 331
E + +AV T SPGS++ AHSP SP A + G+ P PL F
Sbjct: 36 ERMVGKFDGKVAVEKTSSPGSSVGTSNAHSPGTSPSTSASGAS-GIPQPP----PLPYWF 90
Query: 330 QRLIIGSAA*LGPHRP 283
R S +GP P
Sbjct: 91 NRECKSSLMMIGPQPP 106
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 489 LNSLIAVSLTFSPGSTIPPGIAHSPVSPRFIAINCNIGLLFTPTAIFPLSSLFQRLI 319
L S + S+ GS +PPG+A P+ +C LF+ + ++LFQ I
Sbjct: 9 LRSAVRASVQACNGSGLPPGLA--DFKPKLFGFSC--ARLFSKIYVLKATNLFQLFI 61
>Z81053-4|CAB02879.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 452 GEKVSETAIREFKEEALNSLSLADKIQWEKEIDEFFSEGEVIYQGYVDDCRNT 610
G V + I +N + +A + + E+ E G IYQ + +CRNT
Sbjct: 171 GYAVGKAPIHRTTTAIINGMGMASRKLFHVELHE----GRTIYQDFYAECRNT 219
>Z78063-7|CAB01506.1| 418|Caenorhabditis elegans Hypothetical
protein E02A10.1 protein.
Length = 418
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 452 GEKVSETAIREFKEEALNSLSLADKIQWEKEIDEFFSEGEVIYQGYVDDCRNT 610
G V + I +N + +A + + E+ E G IYQ + +CRNT
Sbjct: 171 GYAVGKAPIHRTTTAIINGMGMASRKLFHVELHE----GRTIYQDFYAECRNT 219
>AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical
protein Y18D10A.12 protein.
Length = 228
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 294 PHRPKTPRPQIPVRPR 247
PH P+ PRPQ PV+PR
Sbjct: 49 PHSPRPPRPQ-PVQPR 63
>AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical
protein C03H5.5 protein.
Length = 558
Score = 27.9 bits (59), Expect = 8.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +2
Query: 32 KNCYYDKVDWSTEYKQYNPPNYTFP 106
+NCYYD+++ T KQ PP++T+P
Sbjct: 118 QNCYYDRLE--TVQKQL-PPSFTWP 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,704,427
Number of Sequences: 27780
Number of extensions: 411803
Number of successful extensions: 1179
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1174
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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