BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4g02
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533485-1|CAG38516.1| 228|Homo sapiens DKFZP564I0422 protein. 47 8e-05
BC008358-1|AAH08358.1| 228|Homo sapiens THAP domain containing,... 47 8e-05
BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil do... 35 0.26
AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein. 35 0.26
AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein. 35 0.26
BC131722-1|AAI31723.1| 102|Homo sapiens THAP9 protein protein. 35 0.34
BC021721-1|AAH21721.1| 213|Homo sapiens THAP domain containing,... 34 0.60
AK223231-1|BAD96951.1| 213|Homo sapiens THAP domain containing,... 34 0.60
AK001339-1|BAA91635.1| 213|Homo sapiens protein ( Homo sapiens ... 34 0.60
CR457256-1|CAG33537.1| 213|Homo sapiens THAP1 protein. 33 0.79
BX538286-1|CAD98081.1| 724|Homo sapiens hypothetical protein pr... 33 0.79
BC112121-1|AAI12122.1| 478|Homo sapiens growth arrest-specific ... 33 0.79
BC104785-1|AAI04786.1| 478|Homo sapiens growth arrest-specific ... 33 0.79
AL139421-4|CAI22511.1| 720|Homo sapiens coiled-coil domain cont... 33 0.79
AF050079-1|AAC69519.1| 478|Homo sapiens growth arrest specific ... 33 0.79
AF050078-1|AAC69518.1| 478|Homo sapiens growth arrest specific ... 33 0.79
BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein. 33 1.0
AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2 ... 33 1.0
AF399571-1|AAK95056.1| 214|Homo sapiens olfactory receptor prot... 32 1.8
BC150248-1|AAI50249.1| 992|Homo sapiens ELKS/RAB6-interacting/C... 31 4.2
BC132784-1|AAI32785.1| 1116|Homo sapiens ELKS/RAB6-interacting/C... 31 4.2
BC132782-1|AAI32783.1| 1116|Homo sapiens ELKS/RAB6-interacting/C... 31 4.2
BC068006-1|AAH68006.1| 627|Homo sapiens ERC1 protein protein. 31 4.2
AY642382-1|AAV34207.1| 1135|Homo sapiens GPBP-interacting protei... 31 4.2
AF514868-1|AAQ08178.1| 1133|Homo sapiens GPBP-interacting protei... 31 4.2
AB053471-1|BAC54110.1| 1116|Homo sapiens ELKS epsilon protein. 31 4.2
AB053470-1|BAC54109.1| 1088|Homo sapiens ELKS delta protein. 31 4.2
AB053469-1|BAC54108.1| 720|Homo sapiens ELKS gamma protein. 31 4.2
AB053468-1|BAC54107.1| 992|Homo sapiens ELKS beta protein. 31 4.2
AB029004-1|BAA83033.2| 1003|Homo sapiens KIAA1081 protein protein. 31 4.2
AB015617-1|BAA88763.1| 948|Homo sapiens ELKS protein. 31 4.2
BC022989-1|AAH22989.1| 222|Homo sapiens THAP domain containing ... 30 9.8
AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350... 30 9.8
AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350... 30 9.8
AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350... 30 9.8
AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated p... 30 9.8
>CR533485-1|CAG38516.1| 228|Homo sapiens DKFZP564I0422 protein.
Length = 228
Score = 46.8 bits (106), Expect = 8e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +2
Query: 119 TSVNKTPDVTFHRCPYNSEMSNKWLRVLKQRCTAFDSVDSKICSKHFELKYFD---AQKK 289
T+ NK +++FHR P + + +W+R+++++ + +CSKHFE FD ++
Sbjct: 12 TTYNKHINISFHRFPLDPKRRKEWVRLVRRK-NFVPGKHTFLCSKHFEASCFDLTGQTRR 70
Query: 290 LKENAVPT 313
LK +AVPT
Sbjct: 71 LKMDAVPT 78
>BC008358-1|AAH08358.1| 228|Homo sapiens THAP domain containing,
apoptosis associated protein 2 protein.
Length = 228
Score = 46.8 bits (106), Expect = 8e-05
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +2
Query: 119 TSVNKTPDVTFHRCPYNSEMSNKWLRVLKQRCTAFDSVDSKICSKHFELKYFD---AQKK 289
T+ NK +++FHR P + + +W+R+++++ + +CSKHFE FD ++
Sbjct: 12 TTYNKHINISFHRFPLDPKRRKEWVRLVRRK-NFVPGKHTFLCSKHFEASCFDLTGQTRR 70
Query: 290 LKENAVPT 313
LK +AVPT
Sbjct: 71 LKMDAVPT 78
>BC146789-1|AAI46790.1| 1583|Homo sapiens GRIP and coiled-coil domain
containing 2 protein.
Length = 1583
Score = 35.1 bits (77), Expect = 0.26
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = +2
Query: 545 KKQEHLNT--RLMDLVVQTKKHVEILQKSMEESRLVKKEQEQ----NIESLKY--IVKCL 700
K +EH T L +L VQ +K + LQK+M+E LVKK+ +Q N+E Y ++K L
Sbjct: 1012 KIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKEL 1071
Query: 701 QEKQT 715
+K T
Sbjct: 1072 NQKLT 1076
>AC012487-1|AAX88838.1| 1583|Homo sapiens unknown protein.
Length = 1583
Score = 35.1 bits (77), Expect = 0.26
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = +2
Query: 545 KKQEHLNT--RLMDLVVQTKKHVEILQKSMEESRLVKKEQEQ----NIESLKY--IVKCL 700
K +EH T L +L VQ +K + LQK+M+E LVKK+ +Q N+E Y ++K L
Sbjct: 1012 KIKEHATTVNELEELQVQLQKQKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKEL 1071
Query: 701 QEKQT 715
+K T
Sbjct: 1072 NQKLT 1076
>AB002334-1|BAA20794.2| 1635|Homo sapiens KIAA0336 protein.
Length = 1635
Score = 35.1 bits (77), Expect = 0.26
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = +2
Query: 545 KKQEHLNT--RLMDLVVQTKKHVEILQKSMEESRLVKKEQEQ----NIESLKY--IVKCL 700
K +EH T L +L VQ +K + LQK+M+E LVKK+ +Q N+E Y ++K L
Sbjct: 1064 KIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIADYERLMKEL 1123
Query: 701 QEKQT 715
+K T
Sbjct: 1124 NQKLT 1128
>BC131722-1|AAI31723.1| 102|Homo sapiens THAP9 protein protein.
Length = 102
Score = 34.7 bits (76), Expect = 0.34
Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Frame = +2
Query: 119 TSVNKTPDVTFHRCPYNSEMSNKWLRVL-----KQRCTAFDSVDSKICSKHFELKYFDA- 280
T +++ ++FH+ P ++ +KW+R + + + + +CSKHF+ F++
Sbjct: 15 TVLSRERGLSFHQFPTDTIQRSKWIRAVNRVDPRSKKIWIPGPGAILCSKHFQESDFESY 74
Query: 281 --QKKLKENAVPT 313
++KLK+ AVP+
Sbjct: 75 GIRRKLKKGAVPS 87
>BC021721-1|AAH21721.1| 213|Homo sapiens THAP domain containing,
apoptosis associated protein 1 protein.
Length = 213
Score = 33.9 bits (74), Expect = 0.60
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 3/202 (1%)
Frame = +2
Query: 128 NKTPDVTFHRCPYNSEMSNKWLRVLKQRCTAFDSVDSKICSKHFELKYFDAQ---KKLKE 298
+K V+FH+ P K +R + S ICS+HF F + K LKE
Sbjct: 15 DKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKE 74
Query: 299 NAVPTXXXXXXXXXXXXXIGKSDSGKTKIEKILNRMTQADLTADIKLNLAHLKEPMHLDS 478
NAVPT + + + + ++Q D A I L + L+ P++L
Sbjct: 75 NAVPTIFLCTEPHDKKEDLLEPQE-QLPPPPLPPPVSQVD--AAIGLLMPPLQTPVNLSV 131
Query: 479 FVTDDLKCKSDAPNAANLWLMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQ 658
F C + ++ H R + Q ++ VE L+K ++ ++ + Q
Sbjct: 132 F------CDHN--------YTVEDTMHQRKR----IHQLEQQVEKLRKKLKTAQQRCRRQ 173
Query: 659 EQNIESLKYIVKCLQEKQTTLE 724
E+ +E LK +V +EK E
Sbjct: 174 ERQLEKLKEVVHFQKEKDDVSE 195
>AK223231-1|BAD96951.1| 213|Homo sapiens THAP domain containing,
apoptosis associated protein 1 isoform 1 variant
protein.
Length = 213
Score = 33.9 bits (74), Expect = 0.60
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 3/202 (1%)
Frame = +2
Query: 128 NKTPDVTFHRCPYNSEMSNKWLRVLKQRCTAFDSVDSKICSKHFELKYFDAQ---KKLKE 298
+K V+FH+ P K +R + S ICS+HF F + K LKE
Sbjct: 15 DKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKE 74
Query: 299 NAVPTXXXXXXXXXXXXXIGKSDSGKTKIEKILNRMTQADLTADIKLNLAHLKEPMHLDS 478
NAVPT + + + + ++Q D A I L + L+ P++L
Sbjct: 75 NAVPTIFLCTEPHDRKEDLLEPQE-QLPPPPLPPPVSQVD--AAIGLLMPPLQTPVNLSV 131
Query: 479 FVTDDLKCKSDAPNAANLWLMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQ 658
F C + ++ H R + Q ++ VE L+K ++ ++ + Q
Sbjct: 132 F------CDHN--------YTVEDTMHQRKR----IHQLEQQVEKLRKKLKTAQQRCRRQ 173
Query: 659 EQNIESLKYIVKCLQEKQTTLE 724
E+ +E LK +V +EK E
Sbjct: 174 ERQLEKLKEVVHFQKEKDDVSE 195
>AK001339-1|BAA91635.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ10477 fis, clone NT2RP2000097. ).
Length = 213
Score = 33.9 bits (74), Expect = 0.60
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 3/202 (1%)
Frame = +2
Query: 128 NKTPDVTFHRCPYNSEMSNKWLRVLKQRCTAFDSVDSKICSKHFELKYFDAQ---KKLKE 298
+K V+FH+ P K +R + S ICS+HF F + K LKE
Sbjct: 15 DKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKE 74
Query: 299 NAVPTXXXXXXXXXXXXXIGKSDSGKTKIEKILNRMTQADLTADIKLNLAHLKEPMHLDS 478
NAVPT + + + + ++Q D A I L + L+ P++L
Sbjct: 75 NAVPTIFLCTEPHDKKEDLLEPQE-QLPPPPLPPPVSQVD--AAIGLLMPPLQTPVNLSV 131
Query: 479 FVTDDLKCKSDAPNAANLWLMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQ 658
F C + ++ H R + Q ++ VE L+K ++ ++ + Q
Sbjct: 132 F------CDHN--------YTVEDTMHQRKR----IHQLEQQVEKLRKKLKTAQQRCRRQ 173
Query: 659 EQNIESLKYIVKCLQEKQTTLE 724
E+ +E LK +V +EK E
Sbjct: 174 ERQLEKLKEVVHFQKEKDDVSE 195
>CR457256-1|CAG33537.1| 213|Homo sapiens THAP1 protein.
Length = 213
Score = 33.5 bits (73), Expect = 0.79
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 128 NKTPDVTFHRCPYNSEMSNKWLRVLKQRCTAFDSVDSKICSKHFELKYFDAQ---KKLKE 298
+K V+FH+ P K +R + S ICS+HF F + K LKE
Sbjct: 15 DKDKPVSFHKFPLTRPSLCKEWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKE 74
Query: 299 NAVPT 313
NAVPT
Sbjct: 75 NAVPT 79
>BX538286-1|CAD98081.1| 724|Homo sapiens hypothetical protein
protein.
Length = 724
Score = 33.5 bits (73), Expect = 0.79
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Frame = +2
Query: 377 TKIEKILNRMTQADL-TADIKLNLAHLKEPMHLDSF-----VTDDLKCKSDAPNAANLWL 538
T IE++ ++ Q + +D+K+N+AH L ++ K +S+ + L
Sbjct: 243 TGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLL 302
Query: 539 MIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKK-----EQEQNIESLKYIVKCLQ 703
++KQ L +++ K+ E+ Q+ M E++L KK EQE+ + L+ + C Q
Sbjct: 303 TLEKQ--LEEKIVAYSSIAAKNAELEQELMLEAQLEKKDQQFKEQEKTMSMLQQDIICKQ 360
Query: 704 EKQTTLE 724
+L+
Sbjct: 361 HHLESLD 367
>BC112121-1|AAI12122.1| 478|Homo sapiens growth arrest-specific 8
protein.
Length = 478
Score = 33.5 bits (73), Expect = 0.79
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 539 MIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTT 718
M KK++HL + ++ Q K+ + LQK+ EE ++K Q N E K I+ C + +
Sbjct: 258 MRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK-QLANYERDKQILLCTKARLKV 316
Query: 719 LEE 727
E+
Sbjct: 317 REK 319
>BC104785-1|AAI04786.1| 478|Homo sapiens growth arrest-specific 8
protein.
Length = 478
Score = 33.5 bits (73), Expect = 0.79
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 539 MIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTT 718
M KK++HL + ++ Q K+ + LQK+ EE ++K Q N E K I+ C + +
Sbjct: 258 MRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK-QLANYERDKQILLCTKARLKV 316
Query: 719 LEE 727
E+
Sbjct: 317 REK 319
>AL139421-4|CAI22511.1| 720|Homo sapiens coiled-coil domain
containing 18 protein.
Length = 720
Score = 33.5 bits (73), Expect = 0.79
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Frame = +2
Query: 377 TKIEKILNRMTQADL-TADIKLNLAHLKEPMHLDSF-----VTDDLKCKSDAPNAANLWL 538
T IE++ ++ Q + +D+K+N+AH L ++ K +S+ + L
Sbjct: 242 TGIEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLL 301
Query: 539 MIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKK-----EQEQNIESLKYIVKCLQ 703
++KQ L +++ K+ E+ Q+ M E++L KK EQE+ + L+ + C Q
Sbjct: 302 TLEKQ--LEEKIVAYSSIAAKNAELEQELMLEAQLEKKDQQFKEQEKTMSMLQQDIICKQ 359
Query: 704 EKQTTLE 724
+L+
Sbjct: 360 HHLESLD 366
>AF050079-1|AAC69519.1| 478|Homo sapiens growth arrest specific 11
protein.
Length = 478
Score = 33.5 bits (73), Expect = 0.79
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 539 MIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTT 718
M KK++HL + ++ Q K+ + LQK+ EE ++K Q N E K I+ C + +
Sbjct: 258 MRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK-QLANYERDKQILLCTKARLKV 316
Query: 719 LEE 727
E+
Sbjct: 317 REK 319
>AF050078-1|AAC69518.1| 478|Homo sapiens growth arrest specific 11
protein.
Length = 478
Score = 33.5 bits (73), Expect = 0.79
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +2
Query: 539 MIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTT 718
M KK++HL + ++ Q K+ + LQK+ EE ++K Q N E K I+ C + +
Sbjct: 258 MRKKEDHLEREMAEVSGQNKRLADPLQKAREEMSEMQK-QLANYERDKQILLCTKARLKV 316
Query: 719 LEE 727
E+
Sbjct: 317 REK 319
>BC117174-1|AAI17175.1| 1291|Homo sapiens KIF15 protein protein.
Length = 1291
Score = 33.1 bits (72), Expect = 1.0
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 VTDDLKCKSDAPNAANLWLMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLV-KKEQ 658
++++L+ + +A L + ++EH N +L V + + H +Q+ R+ K+Q
Sbjct: 618 ISEELRTVQEQMSA--LQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELFSSERIDWTKQQ 675
Query: 659 EQNIESLKYIVKCLQEKQT 715
E+ + L + K LQE QT
Sbjct: 676 EELLSQLNVLEKQLQETQT 694
>AB035898-1|BAB03309.1| 1388|Homo sapiens kinesin-like protein 2
protein.
Length = 1388
Score = 33.1 bits (72), Expect = 1.0
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 482 VTDDLKCKSDAPNAANLWLMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLV-KKEQ 658
++++L+ + +A L + ++EH N +L V + + H +Q+ R+ K+Q
Sbjct: 715 ISEELRTVQEQMSA--LQAKLDEEEHKNLKLQQHVDKLEHHSTQMQELFSSERIDWTKQQ 772
Query: 659 EQNIESLKYIVKCLQEKQT 715
E+ + L + K LQE QT
Sbjct: 773 EELLSQLNVLEKQLQETQT 791
>AF399571-1|AAK95056.1| 214|Homo sapiens olfactory receptor
protein.
Length = 214
Score = 32.3 bits (70), Expect = 1.8
Identities = 29/109 (26%), Positives = 48/109 (44%)
Frame = -3
Query: 675 DSIFCSCSFLTSLDSSMLFCSISTCFLVCTTRSISLVLRCSCFLIISHKLAALGASDLHF 496
DS FC + L + + I F++ T+ I+LV C L+IS+ + +
Sbjct: 108 DSFFCDLPLVIKL--ACVDTYILGVFMISTSGMIALV--CFILLVISYTIILVTVRQRSS 163
Query: 495 KSSVTKLSKCIGSFK*AKFSLISAVRSACVILFNIFSIFVFPLSDFPID 349
S LS C A F++++ C I+V+P ++FPID
Sbjct: 164 GGSSKALSTCS-----AHFTVVTLFFGPCTF------IYVWPFTNFPID 201
>BC150248-1|AAI50249.1| 992|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 992
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 534 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 584
>BC132784-1|AAI32785.1| 1116|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 1116
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 562 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 612
>BC132782-1|AAI32783.1| 1116|Homo sapiens ELKS/RAB6-interacting/CAST
family member 1 protein.
Length = 1116
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 562 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 612
>BC068006-1|AAH68006.1| 627|Homo sapiens ERC1 protein protein.
Length = 627
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 534 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 584
>AY642382-1|AAV34207.1| 1135|Homo sapiens GPBP-interacting protein
130d protein.
Length = 1135
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +2
Query: 536 LMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQT 715
L++ ++ H T +++L + +KH E ++KS E L+++E E+ + + +K +EK+
Sbjct: 161 LLVAEKSHRQT-ILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQEIKSQEEKEQ 219
Query: 716 TLEE 727
E+
Sbjct: 220 EKEK 223
>AF514868-1|AAQ08178.1| 1133|Homo sapiens GPBP-interacting protein
130b protein.
Length = 1133
Score = 31.1 bits (67), Expect = 4.2
Identities = 17/64 (26%), Positives = 38/64 (59%)
Frame = +2
Query: 536 LMIKKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQT 715
L++ ++ H T +++L + +KH E ++KS E L+++E E+ + + +K +EK+
Sbjct: 161 LLVAEKSHRQT-ILELEEEKRKHKEYMEKSDEFICLLEQECERLKKLIDQEIKSQEEKEQ 219
Query: 716 TLEE 727
E+
Sbjct: 220 EKEK 223
>AB053471-1|BAC54110.1| 1116|Homo sapiens ELKS epsilon protein.
Length = 1116
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 562 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 612
>AB053470-1|BAC54109.1| 1088|Homo sapiens ELKS delta protein.
Length = 1088
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 534 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 584
>AB053469-1|BAC54108.1| 720|Homo sapiens ELKS gamma protein.
Length = 720
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 262 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 312
>AB053468-1|BAC54107.1| 992|Homo sapiens ELKS beta protein.
Length = 992
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 534 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 584
>AB029004-1|BAA83033.2| 1003|Homo sapiens KIAA1081 protein protein.
Length = 1003
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 545 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 595
>AB015617-1|BAA88763.1| 948|Homo sapiens ELKS protein.
Length = 948
Score = 31.1 bits (67), Expect = 4.2
Identities = 16/51 (31%), Positives = 29/51 (56%)
Frame = +2
Query: 572 LMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEKQTTLE 724
L D++ ++ V +LQK +E + +++E+ + SLK VK LQ T +
Sbjct: 534 LKDMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTD 584
>BC022989-1|AAH22989.1| 222|Homo sapiens THAP domain containing 6
protein.
Length = 222
Score = 29.9 bits (64), Expect = 9.8
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Frame = +2
Query: 128 NKTPDVTFHRCPYNSEMSNKWLRVLKQ-RCTAFDSVDSK----ICSKHFELKYFDAQK-- 286
+K +TFH P + + KW+ +K+ A + K +CS+HF+ FD
Sbjct: 18 SKLKGLTFHVFPTDENIKRKWVLAMKRLDVNAAGIWEPKKGDVLCSRHFKKTDFDRSAPN 77
Query: 287 -KLKENAVPT 313
KLK +P+
Sbjct: 78 IKLKPGVIPS 87
>AL645487-1|CAH72345.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 545 KKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEK 709
KKQ L RL + K+ E + + +E +L+ K+QE+ IE ++ LQEK
Sbjct: 1741 KKQRGLLLRLQQEKAEIKRLQEANKAARKERQLILKQQEE-IEKIRQTTIKLQEK 1794
>AL590632-2|CAI15177.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 545 KKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEK 709
KKQ L RL + K+ E + + +E +L+ K+QE+ IE ++ LQEK
Sbjct: 1741 KKQRGLLLRLQQEKAEIKRLQEANKAARKERQLILKQQEE-IEKIRQTTIKLQEK 1794
>AL390718-1|CAI14833.1| 3117|Homo sapiens centrosomal protein 350kDa
protein.
Length = 3117
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 545 KKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEK 709
KKQ L RL + K+ E + + +E +L+ K+QE+ IE ++ LQEK
Sbjct: 1741 KKQRGLLLRLQQEKAEIKRLQEANKAARKERQLILKQQEE-IEKIRQTTIKLQEK 1794
>AF287356-1|AAL55733.1| 3117|Homo sapiens centrosome-associated
protein 350 protein.
Length = 3117
Score = 29.9 bits (64), Expect = 9.8
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 545 KKQEHLNTRLMDLVVQTKKHVEILQKSMEESRLVKKEQEQNIESLKYIVKCLQEK 709
KKQ L RL + K+ E + + +E +L+ K+QE+ IE ++ LQEK
Sbjct: 1741 KKQRGLLLRLQQEKAEIKRLQEANKAARKERQLILKQQEE-IEKIRQTTIKLQEK 1794
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,501,254
Number of Sequences: 237096
Number of extensions: 1679807
Number of successful extensions: 4127
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 3876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4125
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -