Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4e22
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p pro...    32   0.69 
AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-P...    32   0.69 
AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-P...    30   2.1  

>AY094699-1|AAM11052.1|   98|Drosophila melanogaster GH10517p
           protein.
          Length = 98

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 162 NEIPCMTYAGGVCRKVGNCPTGTEVTIKGLCPLQQLDDVECCRSVR 299
           N+  C+   GG+C    +C   T  + KGLCP    + VECC  +R
Sbjct: 47  NDRQCVM-VGGLCVAESDCIEPT--SNKGLCPTSAGEGVECCYELR 89


>AE013599-3232|AAM70922.1|   98|Drosophila melanogaster CG10433-PB,
           isoform B protein.
          Length = 98

 Score = 31.9 bits (69), Expect = 0.69
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 162 NEIPCMTYAGGVCRKVGNCPTGTEVTIKGLCPLQQLDDVECCRSVR 299
           N+  C+   GG+C    +C   T  + KGLCP    + VECC  +R
Sbjct: 47  NDRQCVM-VGGLCVAESDCIEPT--SNKGLCPTSAGEGVECCYELR 89


>AE013599-3231|AAF46736.1|  127|Drosophila melanogaster CG10433-PA,
           isoform A protein.
          Length = 127

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 162 NEIPCMTYAGGVCRKVGNCPTGTEVTIKGLCPLQQLDDVECC 287
           N+  C+   GG+C    +C   T  + KGLCP    + VECC
Sbjct: 47  NDRQCVM-VGGLCVAESDCIEPT--SNKGLCPTSAGEGVECC 85


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,772,664
Number of Sequences: 53049
Number of extensions: 496220
Number of successful extensions: 828
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)