Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4e19
         (736 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    26   0.36 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.9  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   7.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.8  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   7.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.8  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    21   7.8  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.8  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 219 ASPTRTTLDCVICRSAFRTAIQGLKAGQTEEELSNVIS 332
           A  TR  L C+ C  +FR+  +     Q  +  +N+IS
Sbjct: 472 AEQTRQILKCMWCGQSFRSLAEMTSHMQQTQHYTNIIS 509


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 141 EDKSLLEDIIEILHRPEYVSENSIQYASPTRTTLDC 248
           E++   +DI EIL +   +++ S+  A   + TL+C
Sbjct: 32  ENEPRKQDIGEILQQIMNITDQSLDEAQARKHTLNC 67


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 56  HQY*NYHKEFHFGRSFTR 3
           HQ     KEFH+ R  TR
Sbjct: 243 HQILELEKEFHYNRYLTR 260


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 56  HQY*NYHKEFHFGRSFTR 3
           HQ     KEFH+ R  TR
Sbjct: 243 HQILELEKEFHYNRYLTR 260


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 56  HQY*NYHKEFHFGRSFTR 3
           HQ     KEFH+ R  TR
Sbjct: 243 HQILELEKEFHYNRYLTR 260


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 449 CFCCSLWFIFDNVTNYWYVK 390
           CF   L++I+    +YW  K
Sbjct: 8   CFLLLLYYIYSKHYSYWQSK 27


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 237 KEFHFNRYLTR 247


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 237 KEFHFNRYLTR 247


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 259 KEFHFNRYLTR 269


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 237 KEFHFNRYLTR 247


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 237 KEFHFNRYLTR 247


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 193 KEFHFNRYLTR 203


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 237 KEFHFNRYLTR 247


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
          protein.
          Length = 100

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35 KEFHFGRSFTR 3
          KEFHF R  TR
Sbjct: 25 KEFHFNRYLTR 35


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 261 KEFHFNRYLTR 271


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 35  KEFHFGRSFTR 3
           KEFHF R  TR
Sbjct: 237 KEFHFNRYLTR 247


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,298
Number of Sequences: 336
Number of extensions: 3344
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)