Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4e17
         (759 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   4.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   4.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    22   4.6  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   4.6  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    22   4.6  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   4.6  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   4.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/43 (23%), Positives = 16/43 (37%)
 Frame = -1

Query: 405 PPTSLSGNCSRNRCILPEFRCPSTHYQTTSVGYHHRCGVHLPF 277
           PPT   G C           C + +   + + YH  C  ++ F
Sbjct: 552 PPTKPYGTCRSEGIFSDPKNCAAYYVCRSGLSYHLSCAENMMF 594


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +3

Query: 402 VVEELSRV---DPAVAAYVDIHNTLVNSL 479
           ++E   RV   DP VA  V+ +NT VN++
Sbjct: 186 IIEAEKRVECNDPLVALVVNENNTTVNNI 214


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 183 PRPLTMLTEDELAMRETIRKLATEQISPLVKK 278
           P+P   +T+ ELA+   ++      IS LV K
Sbjct: 329 PKPFKPITDFELAVPNFLKLQRGSDISKLVAK 360


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 183 PRPLTMLTEDELAMRETIRKLATEQISPLVKK 278
           P+P   +T+ ELA+   ++      IS LV K
Sbjct: 329 PKPFKPITDFELAVPSFLKLQRGSDISKLVAK 360


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 183 PRPLTMLTEDELAMRETIRKLATEQISPLVKK 278
           P+P   +T+ ELA+   ++      IS LV K
Sbjct: 329 PKPFKPITDFELAVPNFLKLQRGSDISKLVAK 360


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 183 PRPLTMLTEDELAMRETIRKLATEQISPLVKK 278
           P+P   +T+ ELA+   ++      IS LV K
Sbjct: 329 PKPFKPITDFELAVPSFLKLQRGSDISKLVAK 360


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 183 PRPLTMLTEDELAMRETIRKLATEQISPLVKK 278
           P+P   +T+ ELA+   ++      IS LV K
Sbjct: 328 PKPFKPITDFELAVPNFLKLQRGSDISKLVAK 359


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 756 GFHVQR*SR*CPCNPWKDQHWSSLER 679
           G+H+   +  CP +P  D+   SLER
Sbjct: 86  GYHLGSYAANCPPSPKDDEKCLSLER 111


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/49 (22%), Positives = 19/49 (38%)
 Frame = -1

Query: 369 RCILPEFRCPSTHYQTTSVGYHHRCGVHLPFSSQADLFVRSLVSVLFPS 223
           +C+  +   PS    TT +     CGV++P        +     +  PS
Sbjct: 379 KCVWCKQSFPSLAAMTTHMKEAKHCGVNVPVPPMQSQIINPQPQITSPS 427


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 375 RNRCILPEFRCPSTH 331
           RNR   P+F  P+TH
Sbjct: 11  RNRGTPPKFELPTTH 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,432
Number of Sequences: 336
Number of extensions: 4018
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)