Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4e17
(759 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.) 196 1e-50
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 2e-28
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 3e-21
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 6e-17
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 61 1e-09
SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044) 50 2e-06
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17) 49 4e-06
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 34 0.14
SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72) 33 0.33
SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14) 31 1.3
SB_51854| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05) 29 4.1
SB_59648| Best HMM Match : Albicidin_res (HMM E-Value=0.63) 28 7.2
SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_29968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 196 bits (479), Expect = 1e-50
Identities = 89/175 (50%), Positives = 128/175 (73%)
Frame = +3
Query: 189 PLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYS 368
PLT L+E+E M++++ + A E+I PLV +M+ ++D GI + LF+ GLMGIE EY
Sbjct: 38 PLTQLSEEEEMMKQSVARFAKEKIQPLVSEMDQNSQMDPGIIKGLFEQGLMGIEIGSEYG 97
Query: 369 GSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYAG 548
G+ F LV+EEL++VDP+V+ D+ NTL+N+L M GT+EQK++YL +L G
Sbjct: 98 GTDSTFFAANLVIEELAKVDPSVSVMCDVQNTLINNLIMTYGTKEQKQEYLPQLAQHMVG 157
Query: 549 SFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSK 713
FCL+E SSGSDAFALKTVA ++ H++++GSKMWI+N++ AGVFLVM N +PS+
Sbjct: 158 GFCLSEESSGSDAFALKTVALEKDGHFVLNGSKMWITNAEYAGVFLVMANVNPSE 212
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 714 GYKGITCFIVERETP 758
GYKGIT FIV RETP
Sbjct: 259 GYKGITTFIVPRETP 273
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 123 bits (296), Expect = 2e-28
Identities = 66/195 (33%), Positives = 112/195 (57%), Gaps = 6/195 (3%)
Frame = +3
Query: 192 LTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQM---LFDNGLMGIETPVE 362
LT LT +++ +RE +++P +++ E+ +R+ L D G GI PV+
Sbjct: 38 LTGLTSEQIHLREVAYNFCQNELAPYADQIDKENNFPK-LREFWKKLGDLGFHGITVPVD 96
Query: 363 YSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-E 539
G G ++ ++V+EE+SRV ++A H+ L + + G +EQK+KYL KL + E
Sbjct: 97 DGGIGSGYMEHIIVLEEMSRVSGSIALSYGAHSNLCINQIARNGNKEQKRKYLPKLLSGE 156
Query: 540 YAGSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPS--K 713
+ G+ ++E ++GSD ++K A K+G+HY+++G KMWI+N A V +V +PS K
Sbjct: 157 HIGALAMSEANAGSDVVSMKLRADKDGDHYVLNGHKMWITNGPDADVLIVYAKTNPSSKK 216
Query: 714 GYKGITCFIVERETP 758
IT F+VE+ P
Sbjct: 217 PEHAITTFLVEKGMP 231
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 99 bits (238), Expect = 2e-21
Identities = 53/132 (40%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Frame = +3
Query: 369 GSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE-YA 545
G G L +V EELS + ++ N+L + G EEQKKKYL ++ E
Sbjct: 176 GIGLGVLDGCVVTEELSYACSGIQTAIEA-NSLAEMPVILAGNEEQKKKYLGRMIKEPIM 234
Query: 546 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPS-KGYK 722
++C+TEP++GSD +KT A+K+G+ Y+I+G KMWI+N VA + V+ D S K
Sbjct: 235 AAYCVTEPTAGSDVAGIKTRAEKKGDEYVINGQKMWITNGGVANWYFVLARTDSSASAGK 294
Query: 723 GITCFIVERETP 758
G T FIV+ +TP
Sbjct: 295 GFTGFIVDADTP 306
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 99.1 bits (236), Expect = 3e-21
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 1/190 (0%)
Frame = +3
Query: 192 LTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSG 371
L L E +R+T R A +++P+ K + EHR +ML + GL+G+E P G
Sbjct: 38 LAKLPETHEMLRKTCRDFADNELTPVAGKFDKEHRYPQEKVKMLGELGLLGVEVPESLGG 97
Query: 372 SGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCT-EYAG 548
+G + + +EE+SR ++ + ++N GT+ QK++++ + G
Sbjct: 98 TGLDAFAYAIAMEEISRGCASLGCIMSVNN---------YGTDAQKEEWIKPFLNGDRVG 148
Query: 549 SFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKGI 728
F L+EP +GSDA A KT A +G+HY+++G+K WI TN S+ GI
Sbjct: 149 CFALSEPDNGSDAGAAKTTAVLDGDHYVLNGTKAWI------------TNGYESEAAVGI 196
Query: 729 TCFIVERETP 758
+ F+V + TP
Sbjct: 197 SAFLVPKPTP 206
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 85.0 bits (201), Expect = 6e-17
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 3/173 (1%)
Frame = +3
Query: 195 TMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDN-GLMGIETPVEYSG 371
++ T+D + +RE + K ++I+P V + E F G G+ PV+Y G
Sbjct: 256 SIFTDDHVQLRENLNKFIEKEINPFVDEWEKAKMFPAHELFKKFGKAGYFGVNKPVKYGG 315
Query: 372 SGCNFLTMMLVVEELSRVD-PAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTK-LCTEYA 545
G ++ + + EEL + V + + + ++ G+EE K+++L + ++
Sbjct: 316 MGLDYSFSVAMAEELGSIKCGGVPMAIGVQADMATPALVRFGSEELKQQFLVPTIAGDFV 375
Query: 546 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNAD 704
++E +GSD ++KT A K+G+ Y+I+G KMW +N A ++ N D
Sbjct: 376 TCLGVSETGAGSDVASIKTTAVKDGDDYVINGGKMWTTNGIQADWMCLLANTD 428
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/71 (39%), Positives = 41/71 (57%)
Frame = +3
Query: 546 GSFCLTEPSSGSDAFALKTVAKKEGEHYIISGSKMWISNSDVAGVFLVMTNADPSKGYKG 725
G ++E +GSD LKT AKK+G+ Y+I+GSKMWI+NS A ++ N K +
Sbjct: 3 GCIGVSEVGAGSDVAGLKTTAKKDGDDYVINGSKMWITNSPSADFICLLANTSDDKPHVN 62
Query: 726 ITCFIVERETP 758
+ +V TP
Sbjct: 63 KSLIMVPMNTP 73
>SB_7379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 413
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Frame = +3
Query: 492 GTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWISNS 665
G+ EQKKK+L L E +FC+TEP + SDA ++ + G+HY+I+G K W S +
Sbjct: 138 GSPEQKKKWLDPLLNGEMRSAFCMTEPGVASSDATNMECKITRHGDHYVINGRKWWSSGA 197
>SB_10343| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=0.00044)
Length = 156
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Frame = +3
Query: 492 GTEEQKKKYLTKLCT-EYAGSFCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWIS 659
G+ EQKKK+L L + +FC+TEP + SDA ++ + G+HY+I+G K W S
Sbjct: 98 GSPEQKKKWLDPLLNGDIRSAFCMTEPGVASSDATNMECKITRHGDHYVINGRKWWSS 155
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 49.6 bits (113), Expect = 3e-06
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Frame = +3
Query: 183 PRPLTMLTEDEL-AMRETIRKLATEQISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPV 359
P LT E+EL A E + K E P K ++ +++ + + L + G G++ P
Sbjct: 17 PEVLTQDQEEELRAFVEPVSKFFEEVNDPA--KNDELETVEEHVMESLKEMGAFGLQVPA 74
Query: 360 EYSGSGCNFLTMMLVVEELSRVDPAVAAYVDIHNTLVNSLFMKLGTEEQKKKYLTKLCTE 539
+ G G +VE + D AV + H ++ + G + K +
Sbjct: 75 DLGGVGLTNTQYARMVEIVGAHDLAVGIVLGAHQSIGFKGILLFGNKVATGK-------K 127
Query: 540 YAGSFCLTEPSSGSDA 587
YA +FCLTEPSSGSDA
Sbjct: 128 YA-AFCLTEPSSGSDA 142
>SB_47347| Best HMM Match : Acyl-CoA_dh_1 (HMM E-Value=1e-17)
Length = 551
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Frame = +3
Query: 369 GSGCNFLTMMLVVEELSRVDPAVAAY-VDIHNTLVNSLFMKLGTEEQKKKYLTKLCTEYA 545
G G + + EE+ R P+ + +T + ++ G++ QK+K+L L
Sbjct: 280 GPGLTNVEYAFICEEMGRCFPSSEVFNCSPPDTGNMEVLIRYGSDAQKEKWLEPLLDGRI 339
Query: 546 GS-FCLTEPS-SGSDAFALKTVAKKEGEHYIISGSKMWIS 659
S F +TEP + SDA +++ + +G+HY+++G K WIS
Sbjct: 340 RSCFAMTEPQVASSDAANIESSIRVDGDHYVLNGRKWWIS 379
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/99 (21%), Positives = 48/99 (48%)
Frame = +3
Query: 78 LRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQ 257
+RRV+G+ E + + A KT+M+ + P+ LT+ T+R++ E+
Sbjct: 891 VRRVIGDIEEEPQATTSVAYALMKTKMEQHFVSAFPKRAKTLTKST-----TLRRIQEER 945
Query: 258 ISPLVKKMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGS 374
+ +++K ++R+ +R+ + + TP ++ S
Sbjct: 946 AASIIQKCYRQYRLQRELRRYRIERSHESVHTPNDHRRS 984
>SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72)
Length = 298
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 174 EVTPRPLTMLTEDELAMRETIRKLATEQISPLVKKMEDEHRIDDG 308
E+T R + ++ RK TEQ S L+K+M+DE +D G
Sbjct: 56 ELTGRKAVSMQPSSDLLKPRPRKTETEQTSDLIKQMKDECAVDSG 100
>SB_37794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 750
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 93 GNKILE-QWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIR-KLATEQISP 266
G K+L QW ++ Q KAY TPR +T+ + D + + + R + +
Sbjct: 625 GEKVLALQWSRESRQTERGIHQAKAYIEMKTPRQITLPSADFIKRQRSEREQCQRSNLKG 684
Query: 267 LVK-KMEDEHRIDDGIRQM 320
V+ K+ D + ID +QM
Sbjct: 685 QVRIKLNDRNNIDTSSKQM 703
>SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14)
Length = 490
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Frame = +3
Query: 450 DIHNTLVNSLFMKLGTEEQKKKYLTKL-CTEYAGSFCLTEPSSGSDAFALKTVA--KKEG 620
D+H + +GT+EQ++K+L + G+F TE G+ L+T A K+
Sbjct: 136 DLHRVMFMPTIKLMGTKEQQEKWLPLAEMHQILGTFAQTELGHGTFVRGLETTATYDKQT 195
Query: 621 EHYI-----ISGSKMWISN 662
+ ++ ++ SK W N
Sbjct: 196 QQFVLHSPSLTASKWWPGN 214
>SB_51854| Best HMM Match : 7tm_1 (HMM E-Value=1.3e-05)
Length = 447
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 3 VLIEIASAEAARFHSANANRIKMFPLRRVVGNKILEQWRSQATAAVGAKTQMKAYSTEVT 182
+++ + E R S+ A+++ P R++ LE+ +QAT + TQ KA+ E+T
Sbjct: 64 LIVNVRDFEQRRTGSSEADKLSTVP-RKLPRKPTLEEL-NQATNVITKATQAKAFEVEMT 121
>SB_59648| Best HMM Match : Albicidin_res (HMM E-Value=0.63)
Length = 139
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 333 GLMGIETPVEYSGSG----CNFLTMMLVVEELSRVDP 431
G G+E P EY G C++L LV+EE DP
Sbjct: 90 GGYGLEIPCEYIFEGDSFSCSWLKRKLVIEEFDATDP 126
>SB_38620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 155 DESIQHRSYPTTFDHADRR*TRHEGNNTETSDRTNKSACEENG 283
+ S+QH S T +HA++R T G++T + + E G
Sbjct: 314 EPSVQHVSSTGTMEHAEQRVTSDAGSDTSIRIMSREMEAREGG 356
>SB_49130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 27.9 bits (59), Expect = 9.5
Identities = 30/148 (20%), Positives = 60/148 (40%)
Frame = +3
Query: 96 NKILEQWRSQATAAVGAKTQMKAYSTEVTPRPLTMLTEDELAMRETIRKLATEQISPLVK 275
+K+LE W A AV A + + L DE+ +R EQ+ ++
Sbjct: 68 DKVLEDWAEDAQRAVDAMKLEVRDAADFLFGSLDGAARDEVRLRSRDEWETPEQLFAVLT 127
Query: 276 KMEDEHRIDDGIRQMLFDNGLMGIETPVEYSGSGCNFLTMMLVVEELSRVDPAVAAYVDI 455
+ E + Q + E+ ++S S +M++++++ + P A D
Sbjct: 128 ETFGEKLTATQLLQRFYGRRQRERESIQDFSHS------LMVLMDKIQKCHPGTIANPDK 181
Query: 456 HNTLVNSLFMKLGTEEQKKKYLTKLCTE 539
TL F++ ++Q ++ L K+ E
Sbjct: 182 DRTL-RDTFVENLQDQQLRRDLKKMIRE 208
>SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 389 DNDVGGGRTVSSGPSRGRLRRHSQHLSQLSVHEARYRRT 505
D VG +SS R LR H + S + H YR T
Sbjct: 77 DTYVGTFAVISSADGRKSLRTHKERTSYMKEHLKNYRST 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,582,566
Number of Sequences: 59808
Number of extensions: 500276
Number of successful extensions: 1560
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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