Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4e16
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    24   1.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    24   1.2  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.0  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.7  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   6.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.1  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 490 CDVLFCCWAGPISEY 446
           CDV + CW G  S Y
Sbjct: 108 CDVFWNCWNGEASRY 122


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 490 CDVLFCCWAGPISEY 446
           CDV + CW G  S Y
Sbjct: 108 CDVFWNCWNGEASRY 122


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 719 LVPNYSAIYCDCGLS 763
           ++ NY A+Y DCG +
Sbjct: 465 ILSNYDALYFDCGFA 479


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 719 NISIFILDNVDLFRVW 672
           N  +FI DNV LF +W
Sbjct: 147 NSDVFIFDNVWLFILW 162


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 541  IINT*MTHLQIIAHQWAQLEKTNLHHLQRLVEKATCWQ 654
            ++N        IAH  A +E+ N   L    E   CWQ
Sbjct: 2412 LVNDPQARAAFIAHVLAFIEEWNFDGLDLDWEYPKCWQ 2449



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +1

Query: 541  IINT*MTHLQIIAHQWAQLEKTNLHHLQRLVEKATCWQ 654
            ++N      + I H    LEK N   L    E   CWQ
Sbjct: 1489 LVNNPAARARFIKHVLQFLEKWNFDGLDLDWEYPKCWQ 1526


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 214 KAGGKEKNLMEKLVYFLLH 270
           K   K+K + +K+++FL H
Sbjct: 72  KCSEKQKEMTKKVIHFLSH 90


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 54  VSALKLRFILKNSTGLKMATQVQAL 128
           V  LK R+I+ N   +KM T+ Q++
Sbjct: 825 VLMLKNRYIILNGRLIKMETKAQSV 849


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 707 FILDNVDLFRVWYFYIKGCQQVAFSTNL*RWCKFVFSN 594
           FI+  V L  +   Y   C  + F+ +L   C F+F N
Sbjct: 153 FIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFN 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,984
Number of Sequences: 336
Number of extensions: 4002
Number of successful extensions: 18
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)