Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4e16
(763 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4655| Best HMM Match : Spectrin (HMM E-Value=0) 48 8e-06
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 48 8e-06
SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 46 3e-05
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 46 4e-05
SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 44 2e-04
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 42 5e-04
SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20) 41 0.001
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 40 0.002
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 39 0.005
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 38 0.012
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038) 37 0.016
SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_11165| Best HMM Match : SH3_1 (HMM E-Value=1.3e-08) 36 0.027
SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0) 36 0.027
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 36 0.027
SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19) 36 0.027
SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.036
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.047
SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25) 35 0.083
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12) 33 0.19
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 31 1.4
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_56252| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.2
SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055) 28 9.5
SB_44475| Best HMM Match : DUF1447 (HMM E-Value=8.7) 28 9.5
>SB_4655| Best HMM Match : Spectrin (HMM E-Value=0)
Length = 934
Score = 48.0 bits (109), Expect = 8e-06
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = +3
Query: 117 VQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPEE 296
V ALYD+ E E+S+ G++LTLLN+ + WW+ ++N G PAAYV+++ +
Sbjct: 853 VVALYDYQ-EKTAREVSMKKGDILTLLNST-NKDWWK-VETNDRQGFVPAAYVKRIDSHK 909
Query: 297 SIQTKAAPPAPRYDQAA 347
+ Q A AP D A
Sbjct: 910 ASQELLA-QAPEVDSVA 925
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 48.0 bits (109), Expect = 8e-06
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +3
Query: 108 ATQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLT 287
+T+V ALY FTGE E+++ G+ + LL + + W +G NG TG+FP++YV +LT
Sbjct: 186 STEVIALYSFTGE-SEDELTMWAGDTIQLLEI-VNDDWLKGSL-NGNTGIFPSSYV-ELT 241
Query: 288 P 290
P
Sbjct: 242 P 242
>SB_10210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 793
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/56 (46%), Positives = 31/56 (55%)
Frame = +3
Query: 126 LYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPE 293
LY F E+SIT E L LL + GEGW +G+ G+ G FP AYV K T E
Sbjct: 439 LYSFEATT-EDELSITEHEELELLEID-GEGWCKGRNKAGKVGFFPEAYVEKRTKE 492
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/60 (41%), Positives = 33/60 (55%)
Frame = +3
Query: 105 MATQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKL 284
+A V ALYD+ E+S GE++T L+ +GW G + N TGLFPA YV L
Sbjct: 242 LAVPVLALYDYEAAEDD-ELSFKAGEIVTKLSERDDQGWCRG-RINHRTGLFPAEYVEAL 299
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Frame = +3
Query: 84 KNSTGLKMATQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFP 263
K+ + QV +Y + E++IT G+V+T+L + E WW G+ ++G G FP
Sbjct: 301 KSKQAAQPKKQVLVMYPYEANRAD-ELTITPGDVITVLYQD-NENWWMGELADGRQGYFP 358
Query: 264 AAYV---RKLTPEESIQTKAAPPA 326
+ Y+ +L E ++ PPA
Sbjct: 359 SNYIMEKEELDSEADLKETQLPPA 382
>SB_42788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/57 (33%), Positives = 37/57 (64%)
Frame = +3
Query: 114 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKL 284
Q +A+YD+ + E++I G+++T+ + GWW+G +N + G+FPA+YV ++
Sbjct: 564 QCKAIYDYQATQ-SDELTIHPGDIITV-TARLDNGWWQGDLNN-QQGIFPASYVEEI 617
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 114 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGE-GWWEGKKSNGETGLFPAAYVRKLTP 290
+V LY F P + E++ GEVL ++ G+ WW KK +G GL P YV+ ++
Sbjct: 270 KVITLYQFQS-PNSEELNFEKGEVLDVIKQPDGDPDWWFAKKQDGSKGLVPKNYVKPVSD 328
Query: 291 EE 296
E+
Sbjct: 329 EQ 330
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 159 EMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVR-KLTPEESI 302
E+ +T G+++ +L E G+GWW+G + G FP+ Y ++T ES+
Sbjct: 220 ELQLTKGDLIHVLEKE-GDGWWKGFIGTRQ-GWFPSNYAEDQITELESV 266
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +3
Query: 126 LYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPEESIQ 305
L+D+ E E+S+ G + ++ E+ +GWWEG +G G+FP+ +V KL P +
Sbjct: 11 LFDYEAE-NADELSLVTGIEINVIR-EVEDGWWEG-TVDGRKGVFPSNFV-KLKPIDETP 66
Query: 306 TKA------APPAPRYDQ 341
TK PPA DQ
Sbjct: 67 TKTKRQPEKQPPAEEPDQ 84
Score = 41.9 bits (94), Expect = 5e-04
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 12/89 (13%)
Frame = +3
Query: 102 KMATQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGE--GWWEGKKSNGETGLFPAAYV 275
K + + YD+ + E+ + G+++T++ E+ + GW EG+ +G+TGLFP +V
Sbjct: 214 KRVLRAKVTYDYE-QQNEDELELKVGDIITIVKKEVFDTPGWMEGEL-DGKTGLFPDNFV 271
Query: 276 RKLTPE----------ESIQTKAAPPAPR 332
L E E KA PPAP+
Sbjct: 272 EILPEETDKPEKPEKMEEKSEKAVPPAPK 300
>SB_4468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1513
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Frame = +3
Query: 114 QVQALYDFTGEP----GTTEMSITCGEVLTLLNTE-IGEGWWEGKKS-NGETGLFPAAYV 275
Q+ A Y++ P G EMS+T GE L + T + WWE K+ +GE PA+Y+
Sbjct: 752 QLLAKYNYKANPNRPGGFDEMSLTAGEKLEFIATHSVNPYWWEAKREESGEVAFVPASYI 811
Query: 276 RKLTPEESIQT 308
L E ++T
Sbjct: 812 MVL--ESKLET 820
>SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20)
Length = 300
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/57 (36%), Positives = 37/57 (64%)
Frame = +3
Query: 114 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKL 284
QV A++ +T + G E++ G V +++ + GE WW+G+ NG+ G+FP+ YV+ L
Sbjct: 236 QVLAMFPYTAQKGD-ELTFYKGSVFNVMSKD-GE-WWKGEL-NGQVGMFPSNYVQSL 288
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 111 TQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTP 290
T +ALY F E+S G + ++ ++ W+EG G+TGLFP +YVR + P
Sbjct: 205 TFAEALYGFEAR-NKDELSFPMGAEI-VVTKDVDNDWYEGT-FEGDTGLFPKSYVRIMDP 261
Query: 291 --EESIQTKAAPPAPR--YDQAADDWGEQHYSAGD 383
E+S+ P R Y A++ E + G+
Sbjct: 262 PVEQSMSDDNKRPYARSIYPFVAENDSELTFKEGE 296
Score = 34.7 bits (76), Expect = 0.083
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 114 QVQALYDFTG-EPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKL 284
+ +ALY F+ G E+S G+V+T+L + + W EG+ +G +G P AY+ L
Sbjct: 358 KARALYHFSALHSGDLELSE--GDVITVLKI-VDDNWLEGRLQSGVSGTCPIAYLEPL 412
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 120 QALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYV 275
+++Y F E +E++ GE++ L G W G+ G+TG FPA++V
Sbjct: 277 RSIYPFVAE-NDSELTFKEGEIIQL-RERAGSQWLIGELG-GKTGRFPASFV 325
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +3
Query: 120 QALYDFTGEP-GTTEMSITCGEVLTLL--NTEIGEGWWEGKKSNGETGLFPAAYVRKLTP 290
+ LY F EP E+ + +++T+ N GW GK +G+TGLFPA Y K++
Sbjct: 17 RVLYAF--EPRNPDEIEVNEDDIVTVDHDNCTAPPGWLRGK-CHGKTGLFPANYAEKISE 73
Query: 291 EESIQTKAAPPAP 329
EE+ Q ++ P
Sbjct: 74 EEAKQAQSPDTTP 86
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 177 GEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPE 293
G+V+ + E GE WWEG+ GLFPA YV+K E
Sbjct: 201 GDVIGITKDE-GE-WWEGRLRENY-GLFPANYVKKKEAE 236
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 123 ALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLT 287
ALY + G+ +S +++ + + + WW G+ NG+ G FP YV KLT
Sbjct: 140 ALYPYRGKKDDM-LSFNKNDIIAIKEQQ--DTWWSGEL-NGKKGWFPKTYV-KLT 189
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 37.5 bits (83), Expect = 0.012
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +3
Query: 78 ILKNSTGLKMATQVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGL 257
+ K+S K+ +A +D+ + E+S T G+++TL E W+EG +G+ G+
Sbjct: 294 LAKSSDSDKLKPSCKAKFDYKAKK-EGELSFTEGQIITLSGKRDDE-WYEGTL-DGKFGI 350
Query: 258 FPAAYVRKLT 287
FP+A V+ LT
Sbjct: 351 FPSALVQILT 360
>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
Length = 274
Score = 37.1 bits (82), Expect = 0.016
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 216 GWWEGKKSNGETGLFPAAYVRKLTPEESIQTKAAPPAP 329
GWWEG NG+ G FP+ YV++++ I P P
Sbjct: 5 GWWEGTL-NGKNGWFPSNYVKEISASPEIPVTPTTPIP 41
>SB_31091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 36.7 bits (81), Expect = 0.021
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Frame = +3
Query: 558 DTSSNYSSSVGTVRK--NKFAPSSKISGESYLLATL--NVEVPDSEKVYII----QDEDG 713
DT S+ + GTVRK N+F+ K GE+Y+L T +++VP E V +I +
Sbjct: 96 DTGSSIHRT-GTVRKSMNRFSVFVKSGGEAYVLGTAEESLQVPPEETVRVITRSGEGAAS 154
Query: 714 YIWSPITQPYIVTV 755
+W P + P+ +V
Sbjct: 155 IVWEPSSAPFTCSV 168
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 114 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGE 215
+V+ LYDF G+ T E+ ++ EVLT+ T I E
Sbjct: 5 KVRVLYDFDGDTATGELIVSVDEVLTVTRTVISE 38
>SB_11165| Best HMM Match : SH3_1 (HMM E-Value=1.3e-08)
Length = 135
Score = 36.3 bits (80), Expect = 0.027
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +3
Query: 114 QVQALYDFTGEPGT-TEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLF-PAAYVRKLT 287
+V+ALY F+ G +++ GE LLN + WW+ K+ NGE ++ PA YVR++
Sbjct: 8 EVEALYPFSYTAGDGRKIAFDTGERFALLNKSNND-WWQVKR-NGEKPMYVPANYVREVV 65
Query: 288 PE 293
+
Sbjct: 66 ED 67
>SB_58222| Best HMM Match : HS1_rep (HMM E-Value=0)
Length = 727
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 150 GTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRK 281
G E++ +++T + +I +GWW G NG+ GLFPA YV +
Sbjct: 684 GEDEITFDPDDIITDIE-KIDDGWWMGT-CNGQRGLFPANYVEE 725
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 114 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRK 281
+ LYDF ++S+T G+V+ +LN + + WW GE G P +Y+ K
Sbjct: 310 KAMVLYDFEA-CAEDDVSVTKGDVVNVLNRDDDDWWWVTTPRGGE-GFVPCSYLSK 363
>SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19)
Length = 152
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 159 EMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPEESIQTKAAPPAP 329
E+S G+ + ++ +I W EG+ NG G+FP YV E+ + APP+P
Sbjct: 2 ELSFKKGDYI-IVKRQIDRNWIEGEV-NGRIGIFPTNYVELRPIEDEDEPDDAPPSP 56
>SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 35.9 bits (79), Expect = 0.036
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 123 ALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPEE 296
A++DF G ++SI GE L +L W EG+ +G+ G P++Y++ + E
Sbjct: 43 AIHDFQSG-GENQLSIRHGEELIVLRYNDTREWCEGQSLSGQLGWVPSSYIKPVNSLE 99
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 35.5 bits (78), Expect = 0.047
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Frame = +3
Query: 102 KMATQVQALYDF-TGEPGTTEMSITCGEVLTLLNT-EIGEGWWEGKKSNGETGLFPAAYV 275
K A V+A+YD+ T EP +S G+V+ +++ +I EGW G ++ G FPA YV
Sbjct: 1511 KEAKYVRAMYDYVTQEPNL--LSFKKGDVIQIIDKPDIEEGWLFGVFASNN-GYFPAEYV 1567
Query: 276 RKL-----TPEESIQTKAAPPAPRYDQAADDWGEQHYSAGDN 386
+ T + KAA + ++AD+ + +S D+
Sbjct: 1568 THIKEDPGTVRKGNLMKAASLGNLFTESADESPKGTHSRRDS 1609
>SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25)
Length = 389
Score = 34.7 bits (76), Expect = 0.083
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 114 QVQALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPE 293
+V A Y + P T E+S G+V + N + W + + E GL PAA V P+
Sbjct: 155 RVVAKYTYNKTPDTDELSFCKGDVFIVDNVFDNDWLWVAAQKSKERGLVPAALVDDADPK 214
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 33.9 bits (74), Expect = 0.14
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +3
Query: 117 VQALYDFTGEPGTTEMSITCGEVLTLLNTE----IGEGWWEGKKSNGETGLFPAAYVRKL 284
V A DFT + +MS GEV+T+++++ + + W G+K++G G F Y K
Sbjct: 160 VTATADFTAQL-PIQMSFKKGEVITVMSSQPRKFMPDDMWFGQKADGVFGFFNKRYTDKA 218
Query: 285 TPEESIQ 305
+ +E+ Q
Sbjct: 219 SIDETDQ 225
>SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12)
Length = 132
Score = 33.5 bits (73), Expect = 0.19
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 177 GEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVR 278
G++LT+++ E + WW+ + S G G+ P YV+
Sbjct: 58 GDILTVISKE-EDNWWKARDSAGREGMIPKPYVQ 90
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 123 ALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGK-KSNGETGLFPAAYVRKLTPEES 299
ALYD+ ++S GEVL + ++ WW K + G G P YV + E+
Sbjct: 75 ALYDYDART-QEDLSFKKGEVLEVNPDDLANDWWRAKSRDTGAEGYIPMNYVAPMETLEA 133
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = +3
Query: 123 ALYDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPEESI 302
A D+ E G MS + GE L + GWW + +G+ PA ++ +PE +
Sbjct: 586 AKMDYVHE-GEDAMSFSEGEEFEFLE-DSHSGWWLVRTLSGQENWAPANFLEMKSPEYAK 643
Query: 303 QTKAA 317
Q K A
Sbjct: 644 QDKPA 648
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 210 GEGWWEGKKSNGETGLFPAAYVRKLTPE 293
GE W G+K +G+ GLF ++ L PE
Sbjct: 274 GEDLWFGEKEDGQLGLFDSSMATILNPE 301
>SB_41888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1419
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 285 TP-EESIQTKAAP--PAPRYDQAADDWGEQHYSAGDNNYQRGVS 407
TP +E +Q AAP APR + A D W E+ S+ + + VS
Sbjct: 1255 TPVKEQVQVAAAPRAEAPRVEAAVDGWTEEDRSSPWPKFDKAVS 1298
>SB_56252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 74
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 264 AAYVRKLTPEESIQTKAAPPAPRYDQAADDW 356
A V K T +ES + +A+ AP YD DW
Sbjct: 37 AECVAKSTEQESCELEASASAPAYDSKPPDW 67
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 159 EMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKLTPEESIQTKAAPPAPRYD 338
E+ I G+V+ +L+ E W ++ G G PA Y L PE T+ P P+
Sbjct: 5339 ELGIREGDVIDVLDDNDTETWLVASETTGAVGWVPAFY---LEPE----TRGKEPIPKGK 5391
Query: 339 QAADD 353
+A +
Sbjct: 5392 EALQE 5396
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/52 (25%), Positives = 20/52 (38%)
Frame = +3
Query: 129 YDFTGEPGTTEMSITCGEVLTLLNTEIGEGWWEGKKSNGETGLFPAAYVRKL 284
Y + ++ GEVL + W+ + G GL P YV+ L
Sbjct: 140 YQIMAHQKSRDLPFKKGEVLVIERDTRDPNWYRARNKTGVIGLIPVNYVQVL 191
>SB_5034| Best HMM Match : Extensin_2 (HMM E-Value=0.0055)
Length = 695
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +3
Query: 240 NGETGLFPAAYVRKLTPEES---IQTKAAPPAPRYDQAADDWGEQHYSAGDNNYQRGV 404
+ TGL P A +P+ AAPPAP D E AGD+ +R V
Sbjct: 185 SANTGLLPFAVANIPSPKPRPPRASKIAAPPAPSLQAVCIDLPEPPLKAGDSPLKRSV 242
>SB_44475| Best HMM Match : DUF1447 (HMM E-Value=8.7)
Length = 141
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 197 EQCEHLSTSYGHLCGARLTSEVIQSLHLGRHFK-TRT 90
E CEH+ S H +L S V ++ GR FK TRT
Sbjct: 50 ENCEHIEISGDHSGALKLPSLVEKTNPTGRRFKGTRT 86
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,438,496
Number of Sequences: 59808
Number of extensions: 463523
Number of successful extensions: 1580
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -