Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4e15
(743 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4412| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 9e-32
SB_980| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 38 0.007
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 38 0.007
SB_42484| Best HMM Match : Sulfate_transp (HMM E-Value=0.00024) 32 0.43
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 32 0.43
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 31 0.75
SB_7319| Best HMM Match : SRCR (HMM E-Value=0) 30 1.7
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22) 29 5.3
SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7) 28 7.0
SB_2930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 28 9.2
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 28 9.2
SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11) 28 9.2
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 28 9.2
SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44) 28 9.2
SB_9526| Best HMM Match : Big_1 (HMM E-Value=1.8) 28 9.2
>SB_4412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 134 bits (323), Expect = 9e-32
Identities = 62/122 (50%), Positives = 84/122 (68%), Gaps = 1/122 (0%)
Frame = +3
Query: 318 KTLHKRVPVTAWLPQYNAEKAIGDLIAGITVGLTVIPQSLAYSNIAGLPPQHGLYGSFLG 497
K KR P+ WL +YN DLIAG+TVGL V+PQ LAY+ +AGLPPQ+GLY +F+G
Sbjct: 378 KYTKKRFPIAKWLSKYNLHFLQCDLIAGLTVGLMVVPQGLAYALVAGLPPQYGLYSAFMG 437
Query: 498 CFVYIVLGGCRAVPAGPTAIASLLTWQVAGGVVEKAIL-LTLLAGIVELMMGVLGLGFLI 674
CFVY V G + + GPTAI SL+ + ++ LTLL+G+++L+MG+L LGFL+
Sbjct: 438 CFVYCVFGTSKDITLGPTAIMSLIVSAYGKSEIPAFVMVLTLLSGVIQLLMGILKLGFLV 497
Query: 675 NF 680
NF
Sbjct: 498 NF 499
Score = 112 bits (269), Expect = 3e-25
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Frame = +3
Query: 318 KTLHKRVPVTAWLPQYNAEKAIGDLIAGITVGLTVIPQSLAYSNIAGLPPQHGLYGSFLG 497
K + + +P+T WLP Y+ D+I G+TVGL VIPQ LAY+ IAGLP +GLY +F+G
Sbjct: 33 KHIGRYLPITKWLPHYSFNNLQCDMIGGLTVGLMVIPQGLAYATIAGLPTVYGLYSAFMG 92
Query: 498 CFVYIVLGGCRAVPAGPTAIASLLTWQVAGGVVEK-----AILLTLLAGIVELMMGVLGL 662
CF+Y + G + V GPTAI SL+ Q E AI L +G+++ MG
Sbjct: 93 CFIYCIFGTSKDVSLGPTAIMSLIVNQYCHYSEEDEDTRFAIALAFFSGLIQFAMGFFRF 152
Query: 663 GFLINF 680
GFL+ F
Sbjct: 153 GFLVRF 158
>SB_980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 761
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +3
Query: 318 KTLHKRVPVTAWLPQYNAEKA-IGDLIAGITVGLTVIPQSLAYSNIAGLPPQHGLYGSFL 494
+TL K P+ WLP+YN K + DL G+TVG+ IPQ GLY + +
Sbjct: 67 ETLEKLFPIVQWLPKYNFRKEFVADLTGGMTVGVMHIPQ--------------GLYTALI 112
Query: 495 GCFVYIVLGGCRAVPAGPTAIASLLTWQVA 584
+Y+++G + + G A+ L+ QV+
Sbjct: 113 PVMIYMLMGTSKYLSQGSFAVICLMVAQVS 142
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 670 KKPSP-RTPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQP 494
K SP +T ++ T ++ + +TT T V VG A T+ HPP T TK+P
Sbjct: 1881 KGASPAKTTRVTKTTETKNGDATSKTTTVKKTTSVAGVTKTVGEAKTSAHPPKTTITKRP 1940
Query: 493 KN-EPYRPCCGGRPAMLEYASDCGMTVRPTVMP 398
+ + +P G+PA + + G + RPT P
Sbjct: 1941 MDAKDGKP---GKPATMATKTKPG-SARPTSPP 1969
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = -2
Query: 670 KKPSP-RTPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQP 494
K SP +T ++ T ++ + +TT T V VG A T+ HPP T TK+P
Sbjct: 739 KGASPAKTTRVTKTTETKNGDATSKTTTVKKTTSVAGVTKTVGEAKTSAHPPKTTITKRP 798
Query: 493 KN-EPYRPCCGGRPAMLEYASDCGMTVRPTVMP 398
+ + +P G+PA + + G + RPT P
Sbjct: 799 MDAKDGKP---GKPATMATKTKPG-SARPTSPP 827
>SB_42484| Best HMM Match : Sulfate_transp (HMM E-Value=0.00024)
Length = 349
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 594 VEKAILLTLLAGIVELMMGVLGLGFL 671
+E A+ L LL GIV+ +MG+L LGF+
Sbjct: 107 MEIAVTLALLVGIVQFLMGLLKLGFV 132
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -2
Query: 667 KPSPRTPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPKN 488
+P+P P + A++ S A T PA K PA ++R P TK PK
Sbjct: 561 RPAPFRPAQVKKVHAKTASVHAKVKTRPAKYYSKPVKSHDKPAKSSRKPAKVYKTKAPKR 620
Query: 487 EPYRP 473
Y P
Sbjct: 621 LNYHP 625
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 31.5 bits (68), Expect = 0.75
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -2
Query: 661 SPRTPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPKNEP 482
+P TP ++T PA + +TTPPAT PA T P+T T P
Sbjct: 46 TPTTPT-TTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTT-TPPATTTP 103
Query: 481 YRPCCGGRPA 452
+P PA
Sbjct: 104 TKPTTTTPPA 113
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/94 (26%), Positives = 31/94 (32%), Gaps = 2/94 (2%)
Frame = -2
Query: 664 PSPRTPIMSSTI--PARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPK 491
P+ TP +T PA + +TTPP T PA T P+T T
Sbjct: 98 PATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTT-TPPAT 156
Query: 490 NEPYRPCCGGRPAMLEYASDCGMTVRPTVMPAIR 389
P +P PA T T P R
Sbjct: 157 TTPTKPTTTTPPATTTPTKSTTTTPPATTTPTTR 190
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = -2
Query: 664 PSPRTPIMSSTI--PARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPK 491
P+ TP +T PA + +TTPPAT PA T P+T T
Sbjct: 70 PATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPTKPTTT-TPPGT 128
Query: 490 NEPYRPCCGGRPA 452
P +P PA
Sbjct: 129 TTPTKPTTTTPPA 141
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -2
Query: 664 PSPRTPIM--SSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPK 491
P+ TP ++T PA + +TTPPAT + PA T P+T T
Sbjct: 56 PATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTT-TPPAT 114
Query: 490 NEPYRP 473
P +P
Sbjct: 115 TTPTKP 120
>SB_7319| Best HMM Match : SRCR (HMM E-Value=0)
Length = 957
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 577 CQVKSEAMAVGPAGTARHPPSTMYTKQPKNEPYRPCCGGRPAMLEYASDCGMTV 416
CQ+ P G A PP T + RPCCG ++ A +CG+++
Sbjct: 144 CQISENRGDQCPLGPALDPPMTWRSAMADG---RPCCGIPVSLDIVAEECGVSI 194
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -2
Query: 667 KPSPRTPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVG 545
K +PR PI SST+ + S A S+T P T ++++ AVG
Sbjct: 1339 KEAPR-PITSSTVTSSMSSSDAGSSTTPLTSLAENKSKAVG 1378
>SB_25976| Best HMM Match : RVT_1 (HMM E-Value=5.3e-22)
Length = 1421
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -3
Query: 327 AASCGSTDAAAQRIAARTTFPPTGCSHCWRSCRREAAGSPRMRCVCVL 184
A C D A + F TG H CR G P C C L
Sbjct: 931 ACQCRLIDTGLPHTACQCRFMDTGLPHTACQCRLMDTGLPHTACQCRL 978
>SB_28106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1206
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -3
Query: 351 TPSPGRACAASCGSTDAAAQRIAARTTFPPTGCSHCWRSCRREA 220
+P GR A + G+ A A T T C H WR C A
Sbjct: 631 SPRCGRLMALAVGALHIARHVNTAGTASADTRCQHEWRVCHPRA 674
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/80 (25%), Positives = 28/80 (35%)
Frame = -2
Query: 661 SPRTPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPKNEP 482
+P TP +T S M + + P+T S T PST T P
Sbjct: 819 TPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPS-TPSTPSTPSTPKTP 877
Query: 481 YRPCCGGRPAMLEYASDCGM 422
PC P+ ++ GM
Sbjct: 878 STPCTPNTPSTNRKSTSLGM 897
>SB_14335| Best HMM Match : DUF1315 (HMM E-Value=2.7)
Length = 1223
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 169 PPK*FQDANTTHPRAPCRLPTTRTPAMTTSCRRERRA-SGYALRCGVG 309
PP FQD PRA +PT R TS ++ RRA GY + +G
Sbjct: 1029 PPPEFQDGPAPTPRARRPVPTPR-----TSIKQTRRALKGYTMSFEIG 1071
>SB_2930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 588
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/52 (30%), Positives = 19/52 (36%)
Frame = +3
Query: 78 DPRNPTPCNRGMXXXXXXXXXXXPISSGRPAPKMIPRRKHNASSGSLPPPDD 233
D N N+G +S G PK +RK N S S PDD
Sbjct: 104 DITNEALGNKGPEPSPAFDVDRGKVSDGEKKPKCATKRKKNKSDDSFTMPDD 155
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 27.9 bits (59), Expect = 9.2
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +1
Query: 52 RTSLSRRPATRVIRPRATAACPADTGNIAPIGPSLLDDQPPK*FQDANTTHPRAPCRLPT 231
+T+L+ P T V + T ACP + ++P GPS++ P + TH P PT
Sbjct: 604 QTTLTLPPQTAV---QCTLACPRVSRVLSPSGPSVVVTLP---LPPTDHTHTPPP---PT 654
Query: 232 TRTP 243
R+P
Sbjct: 655 DRSP 658
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 40 PLC--IRTSLSRRPATRVIRPRATAACPADTGNIAPIGPS 153
P C + TSLS AT ++RP T PA T +P P+
Sbjct: 102 PSCRALETSLSSCLATLLVRPLETIPAPAPTTPTSPATPA 141
>SB_23967| Best HMM Match : SRCR (HMM E-Value=5.4e-11)
Length = 3369
Score = 27.9 bits (59), Expect = 9.2
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Frame = -2
Query: 652 TPIMSSTIPARSVSRMAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPK--NEPY 479
TP ST P + +T PP C+ E + G PP ++PK N +
Sbjct: 3166 TPFTGSTTPFTGSTTPPPTTRPPCECK-DGETGVLAEDGKCDCPPKCDDGRKPKFVNNRW 3224
Query: 478 R---PCCGGRPAMLEYASDCGMTVRPTVMP 398
+ P CG PA + G + +P V P
Sbjct: 3225 KCPPPECGEHPACVTGRKGEGCS-QPDVTP 3253
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 104 PRHVQLTPETSLPSAHLFWTTSPQND---SKTQTQRI-LGLPAASRRQERQQ*LHPVGGN 271
PR + ++P+ LP HL T P + +Q RI LGL S ++Q L G N
Sbjct: 820 PRSMNVSPQPLLPQVHLMNATYPLGTPALNNSQLARIRLGLAILS---QQQMMLGGYGQN 876
Query: 272 VVRAAMRCAAASVE 313
++ + AA +E
Sbjct: 877 TGQSVVENAAIGIE 890
>SB_13543| Best HMM Match : DUF1020 (HMM E-Value=0.44)
Length = 850
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/45 (33%), Positives = 18/45 (40%)
Frame = -3
Query: 339 GRACAASCGSTDAAAQRIAARTTFPPTGCSHCWRSCRREAAGSPR 205
GR A + G+ A A T T C H W R+AA R
Sbjct: 350 GRLMALAVGALHVARHVNTAGTASADTRCQHEWHDSARKAAAGGR 394
>SB_9526| Best HMM Match : Big_1 (HMM E-Value=1.8)
Length = 649
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +2
Query: 104 PRHVQLTPETSLPSAHLFWTTSPQND---SKTQTQRI-LGLPAASRRQERQQ*LHPVGGN 271
PR + ++P+ LP HL T P + +Q RI LGL S ++Q L G N
Sbjct: 39 PRSMNVSPQPLLPQVHLMNATYPLGTPALNNSQLARIRLGLAILS---QQQMMLGGYGQN 95
Query: 272 VVRAAMRCAAASVE 313
++ + AA +E
Sbjct: 96 TGQSVVENAAIGIE 109
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,517,338
Number of Sequences: 59808
Number of extensions: 436336
Number of successful extensions: 1720
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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