Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4e15
(743 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 29 0.15
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 1.9
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 25 3.3
AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein. 25 3.3
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 4.3
AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding pr... 24 5.7
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 10.0
CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein. 23 10.0
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 10.0
AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical prot... 23 10.0
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 29.1 bits (62), Expect = 0.15
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = -1
Query: 698 RDRTRHEVNQKAEPEDTHHELDYSRQE--RQQNGLLDH 591
+DR E+N+KA+ E+ + +++ + E ++Q L+DH
Sbjct: 414 QDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDH 451
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 91 RPRATAACPADTGNIAPIGPSLLDDQPP 174
+P AA PA ++AP+ PS + PP
Sbjct: 76 QPTVLAASPAPQPSLAPVVPSSVVTAPP 103
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 24.6 bits (51), Expect = 3.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 73 PATRVIRPRATAACPADTGNIAP 141
PAT + P T P T +AP
Sbjct: 31 PATTTVAPTTTTVAPTTTTTVAP 53
Score = 23.0 bits (47), Expect = 10.0
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -2
Query: 598 STTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQP 494
+T PAT V V P T P+T T P
Sbjct: 27 TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAP 61
>AF046924-1|AAC08530.1| 122|Anopheles gambiae mucin protein.
Length = 122
Score = 24.6 bits (51), Expect = 3.3
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 73 PATRVIRPRATAACPADTGNIAP 141
PAT + P T P T +AP
Sbjct: 31 PATTTVAPTTTTVAPTTTTTVAP 53
Score = 23.0 bits (47), Expect = 10.0
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -2
Query: 598 STTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQP 494
+T PAT V V P T P+T T P
Sbjct: 27 TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAP 61
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 173 QNDSKTQTQRILGLPAASRRQERQQ 247
+ D++ ++R GL A RR+ERQ+
Sbjct: 920 KEDTRVHSRRGTGLNCAIRREERQR 944
>AY146746-1|AAO12061.1| 333|Anopheles gambiae odorant-binding
protein AgamOBP43 protein.
Length = 333
Score = 23.8 bits (49), Expect = 5.7
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = -3
Query: 360 AAATPSPGRACAASCGSTDAAAQRIAARTTFPPTGCSHCWRSCRREAAGSPR--MRCVCV 187
A ATP P A + + DAA Q + P + A +RC+ V
Sbjct: 26 AYATPPPTTANCTTVSTFDAALQECVVQLGIAPERLDQEYNLLLYPADRDTMCLVRCIGV 85
Query: 186 LESFW 172
L FW
Sbjct: 86 LLRFW 90
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.0 bits (47), Expect = 10.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 607 MAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPKNEPY 479
M+ S T T +A A GT + P+T QP PY
Sbjct: 1 MSVSKTITETVSATGKA-ASAVIGTTQSTPATAAAPQPVQRPY 42
>CR954256-2|CAJ14143.1| 295|Anopheles gambiae cyclin protein.
Length = 295
Score = 23.0 bits (47), Expect = 10.0
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -2
Query: 607 MAFSTTPPATCQVKSEAMAVGPAGTARHPPSTMYTKQPKNEPY 479
M+ S T T +A A GT + P+T QP PY
Sbjct: 1 MSVSKTITETVSATGKA-ASAVIGTTQSTPATAAAPQPVQRPY 42
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 23.0 bits (47), Expect = 10.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 632 YSRQERQQNGLLDHTAGDLPS 570
YS ER G+L TA LP+
Sbjct: 438 YSSSERSSTGILGGTAAYLPA 458
>AJ438610-11|CAD27483.1| 765|Anopheles gambiae hypothetical protein
protein.
Length = 765
Score = 23.0 bits (47), Expect = 10.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 632 YSRQERQQNGLLDHTAGDLPS 570
YS ER G+L TA LP+
Sbjct: 439 YSSSERSSTGILGGTAAYLPA 459
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 661,869
Number of Sequences: 2352
Number of extensions: 13986
Number of successful extensions: 50
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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