Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4e14
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch... 101 9e-23
SPCC663.13c |||N-acetyltransferase |Schizosaccharomyces pombe|ch... 69 4e-13
SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subuni... 54 1e-08
SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subuni... 35 0.012
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 30 0.25
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 30 0.25
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 27 3.1
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 26 5.4
SPBC18E5.13 ||SPBC23G7.03|translation initiation factor |Schizos... 26 5.4
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo... 25 7.1
SPAC11E3.11c |||guanyl-nucleotide exchange factor |Schizosacchar... 25 7.1
SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein Rad4|Schizosac... 25 7.1
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 25 9.4
>SPBC13E7.02 |cwf24||GCN5-related N
acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 533
Score = 101 bits (242), Expect = 9e-23
Identities = 57/144 (39%), Positives = 83/144 (57%)
Frame = +1
Query: 127 AKIELGDVTPHNIKQLKKLNTVVFPVSYNDKFYKDVLEAGELAKLAYYNDIVVGAVCCRI 306
+K + ++T NI K+L VV SY+DKFY+ VL+ + A++A + D VGA+ +
Sbjct: 377 SKYFIREITESNIVHFKRLVRVVLEASYSDKFYRLVLKNPDYARIATFEDKFVGAISSLV 436
Query: 307 DTSENSRRLYIMTLGCLYPYRRLGIGSMMVKHVLNYVKQDGNFDSIFLHVQVNNEGAIDF 486
+NS LY+ L L PYR LGIGS+++ HV + N D I LHVQ NE I +
Sbjct: 437 -AEDNS--LYVTVLCVLAPYRCLGIGSLLIDHV-KKTAINNNIDRISLHVQTTNESVIKW 492
Query: 487 YKKFGFEIVETKERYYKRIEPADA 558
Y GF+IV+ +Y+R+E A
Sbjct: 493 YTAHGFKIVKQINDFYRRLENKSA 516
>SPCC663.13c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 144
Score = 69.3 bits (162), Expect = 4e-13
Identities = 33/93 (35%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Frame = +1
Query: 133 IELGDVTPHNIKQLKKLNTVVFP---VSYNDKFYKDVLEAGELAKLAYYNDIVVGAVCCR 303
IEL + P+N+K L+ +N F + + FYKD + G LA+ AY+N + VGAV C+
Sbjct: 2 IELDAINPNNLKILEVINEKCFDPEIIIFPTSFYKDTISVGPLAQYAYFNQVCVGAVRCK 61
Query: 304 IDTSENSRRLYIMTLGCLYPYRRLGIGSMMVKH 402
+T S ++ I++L L YR IG+ ++++
Sbjct: 62 KETHNKSHKIQILSLAVLPAYRNRSIGTKLLEY 94
>SPBC15D4.06 |||NatC N-acetyltransferase complex catalytic subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 150
Score = 54.4 bits (125), Expect = 1e-08
Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +1
Query: 247 ELAKLAYYNDIVVGAVCCRIDTSENSR-RLYIMTLGCLYPYRRLGIGSMMVKHVLNYVKQ 423
E + +A ND +GAV C+ D + R YI L + YR GI + + + L+ +K
Sbjct: 41 EFSFVALDNDRFIGAVICKQDVHRGTTLRGYIAMLAIVKEYRGQGIATKLTQASLDVMKN 100
Query: 424 DGNFDSIFLHVQVNNEGAIDFYKKFGFEIVETKERYYKRIEPADAHVL 567
G I L +V+NE A+ FY++ GF + RYY A ++L
Sbjct: 101 RGA-QEIVLETEVDNEAAMSFYERLGFCRYKRLYRYYLNGTDAFRYIL 147
>SPCC16C4.12 |||NatB N-acetyltransferase complex catalytic subunit
Nat3 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 180
Score = 34.7 bits (76), Expect = 0.012
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +1
Query: 367 RRLGIGSMMVKHVLNYVKQDGNFDSIF---LHVQVNNEGAIDFYKKFGFEIVETKERYY 534
RRLG+ M ++Y++ GN ++ F L V+ +N AIDFYK G+ + YY
Sbjct: 84 RRLGLARTM----MDYLETVGNSENAFFVDLFVRASNALAIDFYKGLGYSVYRRVIGYY 138
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 508 IVETKERYYKRIEPADAHVLQKTIRLPSTPLVNGSVSHTKTN 633
+VETK + KR++ + + +K RL +V G KTN
Sbjct: 1080 LVETKHPFIKRVDQLEEALNEKLARLVGEQMVEGDKEKDKTN 1121
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 30.3 bits (65), Expect = 0.25
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 508 IVETKERYYKRIEPADAHVLQKTIRLPSTPLVNGSVSHTKTN 633
+VETK + KR++ + + +K RL +V G KTN
Sbjct: 1080 LVETKHPFIKRVDQLEEALNEKLARLVGEQMVEGDKEKDKTN 1121
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -3
Query: 349 PVS*CKAAESSPMCLSCSTRLPPLCHYNKLILRVHQPPEHLC 224
P+ C + MC +C LP H++++ +R + +H C
Sbjct: 102 PIFLCGPNGAPRMCGTCKCWLPDRSHHSRVSMRCIRKFDHYC 143
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 355 LYPYRRLGIGSMMVKHVLNYVKQDGNFDSIF 447
+YPY +L I S+ H N+ Q+G S F
Sbjct: 513 VYPYSQLSINSVTANHGQNFGGQNGGNVSRF 543
>SPBC18E5.13 ||SPBC23G7.03|translation initiation factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 233
Score = 25.8 bits (54), Expect = 5.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -3
Query: 562 HERLLVLFSYSNVLLFQQFQSRISCKSLLHLHYSLVRVKKY 440
H +L + FSYS +F++ QSR S +KKY
Sbjct: 9 HRKLFIQFSYSLTSVFRKCQSRTFMNSQFASAKLSNSIKKY 49
>SPAC1805.15c |pub2||ubiquitin-protein ligase
Pub2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 671
Score = 25.4 bits (53), Expect = 7.1
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = -1
Query: 510 NFKAEFLVKVYCTFIIHLYV*KNTVKISILFHIIEHMLNHH 388
N + L +V+ F+ + K+++KI++ + +I+H+L H+
Sbjct: 188 NLTPKQLKEVFSQFLFNNQS-KSSLKINLEYKVIKHLLEHY 227
>SPAC11E3.11c |||guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 25.4 bits (53), Expect = 7.1
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2
Query: 380 IPSLLYGYKHPSVI 339
+PS++Y +KHP+V+
Sbjct: 661 LPSVIYNHKHPNVV 674
>SPAC23C4.18c |rad4|cut5, dre3|BRCT domain protein
Rad4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 648
Score = 25.4 bits (53), Expect = 7.1
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Frame = +1
Query: 529 YYKRIEPADAHVLQKTIRLPS-TPLVNGSVSH 621
YYK+I D H L K PS P NG H
Sbjct: 372 YYKKIFGIDEHALAKPFFRPSLVPYFNGLSIH 403
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 25.0 bits (52), Expect = 9.4
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 505 EIVETKERYYKRIEPADAHV--LQKTIRLPSTP 597
E+VE +RY + + ADA V ++K +TP
Sbjct: 297 EVVEASDRYANQADAADAEVDNIEKQFAAVTTP 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,743,020
Number of Sequences: 5004
Number of extensions: 57416
Number of successful extensions: 147
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 143
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 291768710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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