Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4e14
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    30   0.073
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   1.6  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   4.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.3  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 29.9 bits (64), Expect = 0.073
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = +1

Query: 334 YIMTLGCLYPYRRLGIGSMMVKHVLNYVKQDGNFDSIFLHVQVNNEGAIDFYKKFGF 504
           Y+ ++   Y YR  GIG+ +++ V  Y K   N +    H+ +  +G   FY K G+
Sbjct: 313 YVESVVVDYRYRGRGIGTHLMEEVEKYCKVMMNIN----HMYIATDGQEVFYAKLGY 365


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 22/78 (28%), Positives = 38/78 (48%)
 Frame = +1

Query: 190  VVFPVSYNDKFYKDVLEAGELAKLAYYNDIVVGAVCCRIDTSENSRRLYIMTLGCLYPYR 369
            V+  +S ++   + + EA  +A + + N + + AVC    TS+      +M LGCL  Y 
Sbjct: 868  VLMEMSGSESSKEFLEEAYIMASVEHPNLLKLLAVCM---TSQMMLITQLMPLGCLLDYV 924

Query: 370  RLGIGSMMVKHVLNYVKQ 423
            R     +  K +LN+  Q
Sbjct: 925  RNNKDKIGSKALLNWSTQ 942


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = +1

Query: 148 VTPHNIKQLKKLNTVVFPVSYNDKFYKDVLEAGELAKLAYYNDIVVGAVCCRIDTSENS 324
           V    + Q   L   ++ + YN+     + +   L  + + +DIV+ AV  RID  EN+
Sbjct: 605 VVTAGVPQGSVLGPTLWNLMYNEVLGLTLYDGASL--IGFADDIVLVAVGSRIDDLENT 661


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 205 SYNDKFYKDVLEAGELAKLAYYNDIVV 285
           S+N+ F+K++L  G+  +    + IV+
Sbjct: 225 SFNEDFFKELLAFGDFGEAVSASQIVI 251


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,340
Number of Sequences: 2352
Number of extensions: 14258
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)