Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4e09
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    26   1.5  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    25   3.4  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     24   4.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.9  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 241 HSCRHGGYYCHLRSGRGCPDCWCPP 315
           + C++G  Y ++ SG GC  C C P
Sbjct: 921 NECKNG--YWNIVSGNGCESCNCDP 943


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 89  FQPFCLLNVGVFTGPKNCDDYLHTL 15
           F P+ +L +G+  G +    +LHTL
Sbjct: 750 FWPWSVLTIGILVGMEGLSAFLHTL 774


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 521 LTLKEANHIYQYDL**SVPDK*HK 592
           L +K  NH+  YDL  S+ D  H+
Sbjct: 487 LDIKNVNHVVNYDLPKSIDDYVHR 510


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = -3

Query: 304 SNQDSHDQTVDGNNTRHDDRNDRLHDQLRPHH 209
           + ++S  Q+   N+   ++ +   H Q +PHH
Sbjct: 325 NKKNSQRQSAQANSGSSNNSSSHSHSQAQPHH 356


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 612 ENCSFRHLCHLSG 574
           +N SFRH+ HL G
Sbjct: 468 DNASFRHMAHLYG 480


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 812,120
Number of Sequences: 2352
Number of extensions: 16065
Number of successful extensions: 67
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)