Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d22
         (621 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.5  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    24   4.5  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    24   4.5  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    24   4.5  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 277  HDRNTSVNVSVHVNKAKTIQYIIHFTY 197
            +D+   +  S+H    +T+  +IHFTY
Sbjct: 1941 YDKQGILRFSLHKEHNETLDRVIHFTY 1967


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 450 AQYGSPDL*LSLCTHLFPVPACTKPDVQIFC 358
           A+YG  DL L L   + P   CT+P+  +FC
Sbjct: 2   AEYGLKDL-LPLKLDI-PDEGCTRPNKSMFC 30


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +3

Query: 429 DQGYHTVLNLGTKGVNYATTVIMQTAIKNFNLPSPEQGVD---GRAR 560
           DQ +H ++NL   GV +          K +   SP+   D   GRA+
Sbjct: 322 DQEFHFIINLAVGGVAFFPDAATNPGGKPWKNNSPQAATDFWNGRAQ 368


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +3

Query: 429 DQGYHTVLNLGTKGVNYATTVIMQTAIKNFNLPSPEQGVD---GRAR 560
           DQ +H ++NL   GV +          K +   SP+   D   GRA+
Sbjct: 322 DQEFHFIINLAVGGVAFFPDAATNPGGKPWKNNSPQAATDFWNGRAQ 368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,096
Number of Sequences: 2352
Number of extensions: 12939
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60214320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)