Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d22
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   1.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   3.2  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    22   4.2  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +3

Query: 261 DVFLSWFPFYYXVKIVLVLWLLSPATKGSSI 353
           DV +   P YY + +V + W     TK SSI
Sbjct: 203 DVLVETEPIYYNLTMVKLNWPKKRVTKMSSI 233


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 212 DVLDSFRFVHVHGNIH*CIPIMVSVLLRXED 304
           DVL+  R++H  G +H  + +  +VLL  E+
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLK-NVLLDIEN 734


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +2

Query: 212 DVLDSFRFVHVHGNIH*CIPIMVSVLLRXED 304
           DVL+  R++H  G +H  + +  +VLL  E+
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLK-NVLLDIEN 772


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 520 TCRVPNRAWMGGLGRRSKPV 579
           T R P RAW G    R +P+
Sbjct: 912 TPRSPGRAWPGDSDIRQRPI 931


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 275 MVSVLLRXEDCFSAVAFVASNERILHTLQKICT 373
           ++ VLL  ED  S    +   ++ +  L+K+C+
Sbjct: 12  LLLVLLAIEDTMSKKMTIEEAKKTIKNLRKVCS 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,036
Number of Sequences: 438
Number of extensions: 3786
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)