Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d21
         (286 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128490-1|AAM75083.1|  372|Drosophila melanogaster RH23394p pro...    26   6.5  
AE014135-115|AAF59326.3|  669|Drosophila melanogaster CG9935-PA,...    26   6.5  
AE014135-114|ABI29182.1|  899|Drosophila melanogaster CG9935-PB,...    26   6.5  
AE014135-113|ABI29183.1|  871|Drosophila melanogaster CG9935-PC,...    26   6.5  
AY070807-1|AAL48429.1|  147|Drosophila melanogaster AT19802p pro...    26   8.6  
AE014134-3254|AAN11079.1|  147|Drosophila melanogaster CG31680-P...    26   8.6  

>AY128490-1|AAM75083.1|  372|Drosophila melanogaster RH23394p
           protein.
          Length = 372

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 61  RSYT*NYNDYGFCVACMYIIFLKANSNYVMLIIEEEK 171
           +++T N   YGFCV  +  I  +   +Y++ ++ + K
Sbjct: 125 KNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 161


>AE014135-115|AAF59326.3|  669|Drosophila melanogaster CG9935-PA,
           isoform A protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 61  RSYT*NYNDYGFCVACMYIIFLKANSNYVMLIIEEEK 171
           +++T N   YGFCV  +  I  +   +Y++ ++ + K
Sbjct: 422 KNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 458


>AE014135-114|ABI29182.1|  899|Drosophila melanogaster CG9935-PB,
           isoform B protein.
          Length = 899

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 61  RSYT*NYNDYGFCVACMYIIFLKANSNYVMLIIEEEK 171
           +++T N   YGFCV  +  I  +   +Y++ ++ + K
Sbjct: 422 KNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 458


>AE014135-113|ABI29183.1|  871|Drosophila melanogaster CG9935-PC,
           isoform C protein.
          Length = 871

 Score = 26.2 bits (55), Expect = 6.5
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +1

Query: 61  RSYT*NYNDYGFCVACMYIIFLKANSNYVMLIIEEEK 171
           +++T N   YGFCV  +  I  +   +Y++ ++ + K
Sbjct: 422 KNFTGNERFYGFCVDILETISREVGFDYILDLVPDRK 458


>AY070807-1|AAL48429.1|  147|Drosophila melanogaster AT19802p
           protein.
          Length = 147

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 124 EKLCTYRLHKNHNRYNFMCRSEQSFKQ 44
           ++L T+RLH   N+Y ++      F Q
Sbjct: 24  DRLATWRLHNISNKYKYLSTGNPEFYQ 50


>AE014134-3254|AAN11079.1|  147|Drosophila melanogaster CG31680-PA
           protein.
          Length = 147

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 124 EKLCTYRLHKNHNRYNFMCRSEQSFKQ 44
           ++L T+RLH   N+Y ++      F Q
Sbjct: 24  DRLATWRLHNISNKYKYLSTGNPEFYQ 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,177,585
Number of Sequences: 53049
Number of extensions: 162630
Number of successful extensions: 259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)