Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4d20
(668 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 306 2e-83
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 306 2e-83
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 290 1e-78
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 267 1e-71
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 235 5e-62
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 161 8e-40
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 28 10.0
AY010554-1|AAG32586.1| 266|Drosophila melanogaster ACP32 protein. 28 10.0
AY010547-1|AAG32579.1| 266|Drosophila melanogaster ACP32 protein. 28 10.0
AY010544-1|AAG32576.1| 266|Drosophila melanogaster ACP32 protein. 28 10.0
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 28 10.0
AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-P... 28 10.0
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 306 bits (751), Expect = 2e-83
Identities = 144/193 (74%), Positives = 164/193 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDI
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDI 200
Query: 625 EKACHGIYPLRDV 663
EK+C IYPL DV
Sbjct: 201 EKSCQRIYPLHDV 213
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 306 bits (751), Expect = 2e-83
Identities = 144/193 (74%), Positives = 164/193 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L+++VNKL DSIAKDI
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDI 200
Query: 625 EKACHGIYPLRDV 663
EK+C IYPL DV
Sbjct: 201 EKSCQRIYPLHDV 213
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 290 bits (712), Expect = 1e-78
Identities = 140/195 (71%), Positives = 160/195 (82%), Gaps = 2/195 (1%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTD 261
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDID 80
Query: 262 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 441
E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LR
Sbjct: 81 PEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLR 140
Query: 442 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCEIITRDVTNSELREVVNKLIPDSIAK 618
VFCIGFT KD SQRKTCYA +QVR IR +M +IIT +V+ ++L+++VNKL DSIAK
Sbjct: 141 VFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTDIITNEVSGADLKQLVNKLALDSIAK 200
Query: 619 DIEKACHGIYPLRDV 663
DIEK+C IYPL DV
Sbjct: 201 DIEKSCQRIYPLHDV 215
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 267 bits (654), Expect = 1e-71
Identities = 124/168 (73%), Positives = 144/168 (85%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDP 80
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTLIEA ++ KT DGY+LRV
Sbjct: 81 ERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRV 140
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVV 588
FCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++L++++
Sbjct: 141 FCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLL 188
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 235 bits (574), Expect = 5e-62
Identities = 112/150 (74%), Positives = 126/150 (84%)
Frame = +1
Query: 214 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 393
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 394 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 573
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 574 LREVVNKLIPDSIAKDIEKACHGIYPLRDV 663
L+++VNKL DSIAKDIEK+C IYPL DV
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDV 163
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 161 bits (391), Expect = 8e-40
Identities = 75/108 (69%), Positives = 89/108 (82%)
Frame = +1
Query: 340 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 519
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 520 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDV 663
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDV 108
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 215 PFNP-SEAIFVPWVRLTSVVPTCLLLNIDGALTS 117
PF P + +FVPW R+ + P + L+ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AY010554-1|AAG32586.1| 266|Drosophila melanogaster ACP32 protein.
Length = 266
Score = 28.3 bits (60), Expect = 10.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 263 RKGLSANSD*SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSK 400
R+G +A +D C DV + T+T W P++ G ++G L K
Sbjct: 21 REGRTARAD---QRCSDVADADTATHWLPGPVALGQLPEHGALGQK 63
>AY010547-1|AAG32579.1| 266|Drosophila melanogaster ACP32 protein.
Length = 266
Score = 28.3 bits (60), Expect = 10.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 263 RKGLSANSD*SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSK 400
R+G +A +D C DV + T+T W P++ G ++G L K
Sbjct: 21 REGRTARAD---QRCSDVADADTATHWLPGPVALGQLPEHGALGQK 63
>AY010544-1|AAG32576.1| 266|Drosophila melanogaster ACP32 protein.
Length = 266
Score = 28.3 bits (60), Expect = 10.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 263 RKGLSANSD*SPNMCKDVMCSATSTAWTSQPISSGGWLKNGRLSSK 400
R+G +A +D C DV + T+T W P++ G ++G L K
Sbjct: 21 REGRTARAD---QRCSDVADADTATHWLPGPVALGQLPEHGALGQK 63
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 28.3 bits (60), Expect = 10.0
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 215 PFNP-SEAIFVPWVRLTSVVPTCLLLNIDGALTS 117
PF P + +FVPW R+ + P + L+ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AE013599-2921|AAF57537.1| 632|Drosophila melanogaster CG15904-PA
protein.
Length = 632
Score = 28.3 bits (60), Expect = 10.0
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -3
Query: 666 ANIAQRVDAMAGLLDVLGNGVRNQLVHHLPEFRVSDVACNDFTHFLSDC 520
AN+ M LLD++ GV L+H E V + ++DC
Sbjct: 266 ANVTADYLNMTNLLDLVSQGVYETLIHSFTEITTKFVVSYSYPIGINDC 314
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,974,275
Number of Sequences: 53049
Number of extensions: 671519
Number of successful extensions: 2090
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2088
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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