Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d11
         (547 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011343-1|AAR96135.1|  271|Drosophila melanogaster RH38183p pro...    31   0.77 
AY118796-1|AAM50656.1|  491|Drosophila melanogaster GH17672p pro...    31   0.77 
AE014297-375|AAN14329.1|  491|Drosophila melanogaster CG1213-PC,...    31   0.77 
AE014297-374|AAF51942.1|  491|Drosophila melanogaster CG1213-PB,...    31   0.77 
AE014297-373|AAF51941.1|  491|Drosophila melanogaster CG1213-PA,...    31   0.77 
AE014298-2878|AAF48975.1|  743|Drosophila melanogaster CG14204-P...    28   9.5  

>BT011343-1|AAR96135.1|  271|Drosophila melanogaster RH38183p
           protein.
          Length = 271

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = +3

Query: 51  LWLPTNALLFVAWTEATGRGGLPYS*YYKDQMERAKLSMNLTVINFISKYCYT-KFI--Y 221
           +W+P  AL+       TG G LP++     +M  A +       + ++  C+T  F+  +
Sbjct: 164 VWMPVPALIIYNIVYCTGFGPLPWA--VLGEMFPANIKS--VASSVVASTCWTLGFLVTF 219

Query: 222 YYLKIDKL*RYSNFWLF 272
           +Y  +D L  Y  FWLF
Sbjct: 220 FYPSLDALGSYYAFWLF 236


>AY118796-1|AAM50656.1|  491|Drosophila melanogaster GH17672p
           protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = +3

Query: 51  LWLPTNALLFVAWTEATGRGGLPYS*YYKDQMERAKLSMNLTVINFISKYCYT-KFI--Y 221
           +W+P  AL+       TG G LP++     +M  A +       + ++  C+T  F+  +
Sbjct: 384 VWMPVPALIIYNIVYCTGFGPLPWA--VLGEMFPANIKS--VASSVVASTCWTLGFLVTF 439

Query: 222 YYLKIDKL*RYSNFWLF 272
           +Y  +D L  Y  FWLF
Sbjct: 440 FYPSLDALGSYYAFWLF 456


>AE014297-375|AAN14329.1|  491|Drosophila melanogaster CG1213-PC,
           isoform C protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = +3

Query: 51  LWLPTNALLFVAWTEATGRGGLPYS*YYKDQMERAKLSMNLTVINFISKYCYT-KFI--Y 221
           +W+P  AL+       TG G LP++     +M  A +       + ++  C+T  F+  +
Sbjct: 384 VWMPVPALIIYNIVYCTGFGPLPWA--VLGEMFPANIKS--VASSVVASTCWTLGFLVTF 439

Query: 222 YYLKIDKL*RYSNFWLF 272
           +Y  +D L  Y  FWLF
Sbjct: 440 FYPSLDALGSYYAFWLF 456


>AE014297-374|AAF51942.1|  491|Drosophila melanogaster CG1213-PB,
           isoform B protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = +3

Query: 51  LWLPTNALLFVAWTEATGRGGLPYS*YYKDQMERAKLSMNLTVINFISKYCYT-KFI--Y 221
           +W+P  AL+       TG G LP++     +M  A +       + ++  C+T  F+  +
Sbjct: 384 VWMPVPALIIYNIVYCTGFGPLPWA--VLGEMFPANIKS--VASSVVASTCWTLGFLVTF 439

Query: 222 YYLKIDKL*RYSNFWLF 272
           +Y  +D L  Y  FWLF
Sbjct: 440 FYPSLDALGSYYAFWLF 456


>AE014297-373|AAF51941.1|  491|Drosophila melanogaster CG1213-PA,
           isoform A protein.
          Length = 491

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = +3

Query: 51  LWLPTNALLFVAWTEATGRGGLPYS*YYKDQMERAKLSMNLTVINFISKYCYT-KFI--Y 221
           +W+P  AL+       TG G LP++     +M  A +       + ++  C+T  F+  +
Sbjct: 384 VWMPVPALIIYNIVYCTGFGPLPWA--VLGEMFPANIKS--VASSVVASTCWTLGFLVTF 439

Query: 222 YYLKIDKL*RYSNFWLF 272
           +Y  +D L  Y  FWLF
Sbjct: 440 FYPSLDALGSYYAFWLF 456


>AE014298-2878|AAF48975.1|  743|Drosophila melanogaster CG14204-PA
           protein.
          Length = 743

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 25  CLQINFNIIYGYQLMPYSLSLGRRLQVEEGYLIHNTIKIKW 147
           CL   F  I+   L PYS  LG+   V +G L +  ++I W
Sbjct: 542 CLAPLFTSIFA--LYPYSKLLGKSPSVLQGALYYTLVRIAW 580


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,874,722
Number of Sequences: 53049
Number of extensions: 323848
Number of successful extensions: 450
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)