Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d10
         (371 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;...    34   0.72 
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Trepone...    33   2.2  
UniRef50_Q8G7Y8 Cluster: Putative uncharacterized protein; n=2; ...    32   3.8  
UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2; ...    32   3.8  
UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep: D-...    31   5.0  
UniRef50_UPI0000499A59 Cluster: importin alpha; n=1; Entamoeba h...    31   6.7  
UniRef50_UPI00015B5F56 Cluster: PREDICTED: similar to dynein hea...    31   8.8  
UniRef50_Q6ALP6 Cluster: Putative uncharacterized protein; n=1; ...    31   8.8  
UniRef50_Q4CWK8 Cluster: Putative uncharacterized protein; n=2; ...    31   8.8  

>UniRef50_Q556F5 Cluster: C2H2 type Zn finger-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
           finger-containing protein - Dictyostelium discoideum AX4
          Length = 774

 Score = 34.3 bits (75), Expect = 0.72
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 298 NKIIFPLHYVLLLSSPIRALSSVRWGNLPFLPPS-KEKCSDRHNRH 164
           NK + P  Y  + SSP+   S+   GNL FL  S  ++  D HN H
Sbjct: 689 NKSVLPSIYSSMQSSPLSTSSTTSKGNLSFLVSSNNDEDDDHHNHH 734


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 33.1 bits (72), Expect = 1.7
 Identities = 15/35 (42%), Positives = 23/35 (65%)
 Frame = -2

Query: 310 YYFANKIIFPLHYVLLLSSPIRALSSVRWGNLPFL 206
           Y FANK +F ++Y+L+ S  I  L SV +G + F+
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAYGAIAFM 108


>UniRef50_Q73R85 Cluster: Surface antigen, putative; n=1; Treponema
           denticola|Rep: Surface antigen, putative - Treponema
           denticola
          Length = 618

 Score = 32.7 bits (71), Expect = 2.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 101 SSQNGNLFVATKNDNDCDGTLCTVQIENETK 9
           S +NG  +V  + +N  D  +CT+Q  N+ K
Sbjct: 571 SEENGRFYVVDRRENSTDNNICTIQQVNDAK 601


>UniRef50_Q8G7Y8 Cluster: Putative uncharacterized protein; n=2;
           Bifidobacterium longum|Rep: Putative uncharacterized
           protein - Bifidobacterium longum
          Length = 567

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = -3

Query: 252 RFAP*APCGGGTFLSCHQVKRNVPTATTAIAPSAKALAADV 130
           RFAP A     +F + HQ ++++ TA   +AP+A A AA +
Sbjct: 251 RFAPAAVAHDESFDALHQAEQSLFTAPAPVAPAAPAAAAPI 291


>UniRef50_Q4P5A1 Cluster: Putative uncharacterized protein; n=2;
           Dikarya|Rep: Putative uncharacterized protein - Ustilago
           maydis (Smut fungus)
          Length = 353

 Score = 31.9 bits (69), Expect = 3.8
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +1

Query: 163 DGGCGGRNISLYLVARKEGSPTARSSRRESAKIVAEHSAAEK*FCSQNNTYVYT 324
           D GCG  ++SLYL  R   S     S   + KI  +  AAE+ F   NN  V+T
Sbjct: 125 DLGCGWGSLSLYLAERYPNSRIYALSNSRTQKIYIDSIAAERGF---NNLEVHT 175


>UniRef50_Q1D8F1 Cluster: D-aminopeptidase; n=5; Bacteria|Rep:
           D-aminopeptidase - Myxococcus xanthus (strain DK 1622)
          Length = 419

 Score = 31.5 bits (68), Expect = 5.0
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 228 GGGTFLSCHQVKRNVPTATTAIAPSAKALAADVLLPC 118
           GGGT + CH  K  + TA+  +  S       VLL C
Sbjct: 198 GGGTGMVCHSFKAGIGTASRKLPESEGGYTVGVLLQC 234


>UniRef50_UPI0000499A59 Cluster: importin alpha; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: importin alpha - Entamoeba
           histolytica HM-1:IMSS
          Length = 478

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 19  FSICTVQSVPSQSLSFFVAT--NKLPFCDDQE 108
           FSICT QS+PSQ L   + +  N   FCDD +
Sbjct: 400 FSICTEQSLPSQLLIITLKSIRNVCRFCDDNK 431


>UniRef50_UPI00015B5F56 Cluster: PREDICTED: similar to dynein heavy
            chain; n=1; Nasonia vitripennis|Rep: PREDICTED: similar
            to dynein heavy chain - Nasonia vitripennis
          Length = 3934

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +2

Query: 2    KLVLSRFQ-SV-PCKVFHHNHCRFSLPQINCHFAMT 103
            KL+ S F  S+ PC  F HNHC  SL   + H  M+
Sbjct: 1692 KLIYSLFDWSIDPCLEFIHNHCTVSLAVTDMHLVMS 1727


>UniRef50_Q6ALP6 Cluster: Putative uncharacterized protein; n=1;
           Desulfotalea psychrophila|Rep: Putative uncharacterized
           protein - Desulfotalea psychrophila
          Length = 225

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 13/31 (41%), Positives = 22/31 (70%)
 Frame = -1

Query: 257 FADSRLELRAVGEPSFLATK*REMFRPPQPP 165
           F ++  +L+AVG+P+FL T  +++F  P PP
Sbjct: 100 FRNNLPDLQAVGDPAFLITDDKKIFILPPPP 130


>UniRef50_Q4CWK8 Cluster: Putative uncharacterized protein; n=2;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 508

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 165 WRLWRSEHFSLLGGKK 212
           W+ WR +HFSL GG++
Sbjct: 150 WKCWRDKHFSLFGGRE 165


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 370,570,627
Number of Sequences: 1657284
Number of extensions: 6775164
Number of successful extensions: 17347
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17347
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)