Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d08
         (744 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.64 
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   2.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   2.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.4  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   6.0  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 280 HCFTLMCYLY*SICSN 327
           HCF+++ Y+Y S C N
Sbjct: 159 HCFSMLNYVYSSKCEN 174


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 666 DPSSVYYKKYNELLGQD 716
           DP   Y KKY+ELL ++
Sbjct: 106 DPQGEYKKKYDELLKKE 122


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 666 DPSSVYYKKYNELLGQD 716
           DP   Y KKY+ELL ++
Sbjct: 106 DPQGEYKKKYDELLKKE 122


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = +3

Query: 6   EIMKPLSLDVISRYLTKNVIAEVFKLKTDSDEDIENIELTKAAPNGEGLLS 158
           EI   +S  V S  L+K    EV    +D D+D ENI +     +G   LS
Sbjct: 7   EIKSKISFSVES-LLSKKEDEEVEHRLSDRDDDDENITVDDDDTDGRESLS 56


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 78  KLKTDSDEDIENIELTKAAPNGE 146
           K   DSD D+ N+      P+GE
Sbjct: 214 KSDADSDSDVVNLSKPGTPPSGE 236


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 666 DPSSVYYKKYNELLGQD 716
           DP   Y +KYN+LL ++
Sbjct: 106 DPKGEYKQKYNKLLEKE 122


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = +3

Query: 540 DEFKRIA-DLIPE--AYYTEKNRDWYSKFQHKAVMIDQAI---LIEHEDPSSVYYKKYNE 701
           DE KR+  D +    A  +EK ++   K  H      Q +   L    DP  +Y++KY +
Sbjct: 56  DELKRVLPDALKSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYDPDGIYFEKYKD 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,678
Number of Sequences: 336
Number of extensions: 3419
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)