Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d08
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.9  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   4.3  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   10.0 

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 90   DSDEDIENIELTKAAPNGEGLLSAVYRIKV 179
            D D+D+EN + T AA   E   +A    +V
Sbjct: 1126 DDDDDVENRQATNAASTSEAARTAAEESRV 1155


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +3

Query: 573  EAYYTEKNRDWYSKFQHKAVMIDQAILIEHED 668
            +A   EK  DW +  QH +   D+   + H+D
Sbjct: 943  DAAMVEKALDWLASKQHSSGRFDETGKVWHKD 974


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
            gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 10.0
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 140  IWCCFC*FNIFYVFIAVCLQFKNFRYNIFSKVS 42
            I  CF  FN FY          +FR  IFS  S
Sbjct: 942  ILSCFRLFNHFYYLFDFDSSLNSFRNRIFSSNS 974


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 724,039
Number of Sequences: 2352
Number of extensions: 14845
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)