Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4d06
         (195 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   0.86 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   0.86 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   1.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        20   2.6  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    20   2.6  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    20   2.6  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    20   2.6  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    20   2.6  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    20   2.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    19   4.6  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    19   4.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    19   6.0  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    19   6.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    18   8.0  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 0.86
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 125 NLYVTAVLSEQWLSNKRVEVIE 60
           N Y+T VL E W S     ++E
Sbjct: 187 NNYLTIVLGETWTSLSVYHLVE 208


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 0.86
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 125 NLYVTAVLSEQWLSNKRVEVIE 60
           N Y+T VL E W S     ++E
Sbjct: 183 NNYLTIVLGETWTSLSVYHLVE 204


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 51  CCRFDNFHAFVRQPLFTENC 110
           CC  +NF+ F+RQ +FT  C
Sbjct: 162 CCD-NNFNVFLRQ-VFTCRC 179


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 116 VTAVLSEQWLSNKRVEVIEAATSVIT 39
           +T    + W SN+R  + +  TS  T
Sbjct: 259 LTEARIQVWFSNRRARLRKQITSAAT 284


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 100 VNNGCRTNAWKLSKR 56
           + +GC  N W  S+R
Sbjct: 216 LQSGCALNLWARSRR 230


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 100 VNNGCRTNAWKLSKR 56
           + +GC  N W  S+R
Sbjct: 216 LQSGCALNLWARSRR 230


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 100 VNNGCRTNAWKLSKR 56
           + +GC  N W  S+R
Sbjct: 216 LQSGCALNLWARSRR 230


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 100 VNNGCRTNAWKLSKR 56
           + +GC  N W  S+R
Sbjct: 216 LQSGCALNLWARSRR 230


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 100 VNNGCRTNAWKLSKR 56
           + +GC  N W  S+R
Sbjct: 215 LQSGCALNLWARSRR 229


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 76  RLFDSHCSLRTAVT*RLFVC 135
           +LF   C + TA+    +VC
Sbjct: 8   KLFKDPCDVYTAIHPLFYVC 27


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 19.0 bits (37), Expect = 4.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 76  RLFDSHCSLRTAVT*RLFVC 135
           +LF   C + TA+    +VC
Sbjct: 8   KLFKDPCDVYTAIHPLFYVC 27


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 18  PGTP*PLS 41
           PGTP PLS
Sbjct: 92  PGTPGPLS 99


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 18  PGTP*PLS 41
           PGTP PLS
Sbjct: 248 PGTPGPLS 255


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 18.2 bits (35), Expect = 8.0
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +3

Query: 57  RFDNFHAFVRQPLFTENCSHV 119
           R +N   +VR+    +NC  +
Sbjct: 346 RKNNIKLYVRRVFIMDNCEEL 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,257
Number of Sequences: 336
Number of extensions: 623
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2156020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)