Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c23
(724 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0457 - 23800451-23800576,23801259-23801312,23801390-238015... 219 1e-57
12_02_0452 - 19188601-19188726,19189364-19189417,19189493-191896... 164 7e-41
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 36 0.033
01_05_0314 - 20779862-20780286,20780734-20781286 33 0.17
06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210... 32 0.53
05_07_0323 + 29260608-29260836,29262242-29262513,29263349-292634... 32 0.53
06_01_0817 - 6185881-6187074 31 1.2
12_01_0090 + 717524-719080 30 1.6
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 30 2.1
04_03_0266 + 13648287-13649099,13649186-13649524 29 2.8
03_06_0421 - 33797836-33797992,33798450-33798549,33798646-337987... 29 2.8
09_04_0198 + 15528576-15528645,15528746-15528893,15529182-155293... 29 3.7
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 29 3.7
11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371 29 4.9
08_02_1063 + 24024030-24024506,24024803-24024856,24024965-240251... 29 4.9
10_08_0933 + 21661209-21662813 28 6.5
09_02_0456 - 9525067-9525422,9525679-9528226 28 6.5
07_01_0880 + 7301042-7301548 28 6.5
05_02_0028 - 5764980-5766374 28 6.5
02_02_0109 + 6830802-6833412,6833491-6833861 28 6.5
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 28 6.5
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 28 6.5
12_01_0836 - 7801155-7801454,7801850-7801914,7802237-7802562,780... 28 8.6
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 28 8.6
08_02_0657 - 19749835-19751942,19753123-19753561 28 8.6
04_03_0145 - 11799689-11800108 28 8.6
04_03_0036 - 9950353-9950379,9950753-9950791,9951021-9951194,995... 28 8.6
03_05_0056 - 20349217-20349484,20349563-20350032,20350049-203504... 28 8.6
>11_06_0457 -
23800451-23800576,23801259-23801312,23801390-23801539,
23801919-23802012,23802460-23802567,23802661-23802793,
23802903-23803139,23803488-23803586,23804968-23804983
Length = 338
Score = 219 bits (536), Expect = 1e-57
Identities = 109/203 (53%), Positives = 141/203 (69%), Gaps = 2/203 (0%)
Frame = +2
Query: 119 PQQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEAL 298
P + V E + AD VCFDVDSTV DEGIDELA FCG G V TA+AM G + F+EAL
Sbjct: 115 PSKGVLETWCNADAVCFDVDSTVCLDEGIDELADFCGAGKAVAEWTAKAMTGTVPFEEAL 174
Query: 299 KKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAER 478
RL +I+P + Q+ + + K P R++PGI +L+K+L V+LVSGGFR +I+PVA
Sbjct: 175 AARLSLIKPYLSQVDDCLVKRPPRISPGIADLIKKLKANNTDVFLVSGGFRQMIKPVASE 234
Query: 479 LNIPTINIFANRLKFYFNGEYAGFDENEPTSRSGGKGLVVRRLKELHGYQRLVIVGDGAT 658
L IP NI AN+L F +GEYAGFD EPTSRSGGK L V+++++ HGY+ LV++GDGAT
Sbjct: 235 LGIPPENIIANQLLFGTSGEYAGFDPTEPTSRSGGKALAVQQIRQNHGYKTLVMIGDGAT 294
Query: 659 DAEASPP--ADGFIGFGGNVVRD 721
D EA P AD FI + G +R+
Sbjct: 295 DLEARQPGGADLFICYAGVQMRE 317
>12_02_0452 -
19188601-19188726,19189364-19189417,19189493-19189642,
19189994-19190087,19190607-19190710
Length = 175
Score = 164 bits (398), Expect = 7e-41
Identities = 81/154 (52%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = +2
Query: 266 MGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGG 445
M G++ F++AL RL + +P++GQ+ + +EK P R++PGI ELVK L + V VYLVSGG
Sbjct: 1 MTGSVPFEKALAARLSLFKPSLGQVEDCMEKRPPRISPGIAELVKMLKAKNVDVYLVSGG 60
Query: 446 FRSLIEPVAERLNIPTINIFANRLKFYFNGEYAGFDENEPTSRSGGKGLVVRRLKELHGY 625
FR +I+PVA +L IP NIFAN+L F +GEY GFD +EPTSRSGGK + V+ +++ GY
Sbjct: 61 FRQMIKPVAMQLGIPPENIFANQLLFGTSGEYVGFDPSEPTSRSGGKAVAVQNIRQKCGY 120
Query: 626 QRLVIVGDGATDAEASPP--ADGFIGFGGNVVRD 721
+ L +VGDGATD EA P AD FI + G +R+
Sbjct: 121 RTLFMVGDGATDLEARQPNGADLFICYAGVQMRE 154
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 35.9 bits (79), Expect = 0.033
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 47 YSLKSNLQYATLKTLSLVSISVMSPQ-QTVQELFRTADCVCFDVDSTVIQDEGIDELAKF 223
Y L N Q T LV +SP Q +++ R AD + +T++QDE + +K
Sbjct: 531 YCLVHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLMQDEIWENGSKV 590
Query: 224 CGKGDEVKRLTAEAMGGNMTFQE 292
K V L A GN T QE
Sbjct: 591 IEKASGVHALLRIAEAGNSTSQE 613
>01_05_0314 - 20779862-20780286,20780734-20781286
Length = 325
Score = 33.5 bits (73), Expect = 0.17
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = -1
Query: 325 RPDDVQSLLQGFLECHIAAHCFRRQSFNLVSFPAELGQFIDAFILYDGRVYIEANAVRCP 146
+P D++ L + +L H+ A +R S N++ +++D F+ R E
Sbjct: 166 KPKDLKELKEQYLLAHLVAGHWRMAS-NIL-------EYVDNFLFQSLREKDEEEVRIAM 217
Query: 145 EQLLDSLLGRHHADRHQ*ERLQRRVLQVA 59
++L D L +HH +H R+ +L +A
Sbjct: 218 QRLQDDLQKKHHGSQHSVRRIAHELLGIA 246
>06_03_0706 +
23719392-23719641,23720337-23720383,23720988-23721060,
23721323-23721540,23721868-23722170,23722322-23722399,
23723064-23723549,23723875-23724312
Length = 630
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 282 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA-VLNNS 136
V+ PP +S + + SSP +N + SMPSS T ES S T +A VL+ S
Sbjct: 486 VLAPPSSS--NAVESSPKIENSGTKSMPSSQHTSESDSATTSAAQVLDKS 533
>05_07_0323 +
29260608-29260836,29262242-29262513,29263349-29263487,
29263581-29263714,29263847-29263970,29264364-29264773
Length = 435
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 216 ASSSMPSSCMTVESTSKQTQSAVLNNSWTVCWGDITLIDTSESV 85
A S+P+ ES+S++T++A ++S CWG + L+ +S +
Sbjct: 3 AGRSVPARGRDSESSSRKTKAAASSSSTAGCWGRLPLLISSGGI 46
>06_01_0817 - 6185881-6187074
Length = 397
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 618 CNSFSRLTTKPLPPDLDVGSFSSKPAYSPLK 526
C S TT P+PP S S PAY P++
Sbjct: 31 CRSCGAPTTTPVPPPWSASSDSPPPAYRPIR 61
>12_01_0090 + 717524-719080
Length = 518
Score = 30.3 bits (65), Expect = 1.6
Identities = 28/79 (35%), Positives = 41/79 (51%)
Frame = -2
Query: 381 PGVSLTGNFSMNSLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSM 202
P S G +++L+ LGL+ S F A + LPP SA+SLL +P P L S S+
Sbjct: 13 PRRSAAGGHQLHALL-AKLGLLHRSEFLSALLSR-LPPSPSALSLLLEAP-PAVL-SPSL 68
Query: 201 PSSCMTVESTSKQTQSAVL 145
+ S+S+ SA+L
Sbjct: 69 VCPVIVAFSSSQAPSSALL 87
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 29.9 bits (64), Expect = 2.1
Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 1/175 (0%)
Frame = -2
Query: 702 PKPMKPSAGGLASASVAPSPTITRRWYPCNSFSRLTTKPLPPDLDVGSFSSKPAYSPLK* 523
P P+ P L + AP+P++ R P + + PP +GS + P Y P +
Sbjct: 152 PAPVLPGTPALLPSVQAPAPSVARN--PNLPIVQPPSVNNPPSRPIGSGNGVPPYPPPQR 209
Query: 522 NLSRLAKMLI-VGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMN 346
+L + V S+ + ++ + + P S +S NSV P + T N
Sbjct: 210 SLPAIPPSTSGVPRESVKPPVAPPIIAQAPRQQALAPSSDHSNGNSVPP--ANTSPPHKN 267
Query: 345 SLI*PTLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTV 181
S I L SS + PPI S +P PQN ++P + +V
Sbjct: 268 SHIPRALPPKESS---SQTGTAHKPPIRG--SAPAETPLPQNTNMPAVPKNGSSV 317
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -1
Query: 721 VTHHVTPEANEAVSRWASLGIGSPVPDDHQALV 623
V H V P A E + W + G P PD H+ +V
Sbjct: 2 VAHGVLP-AKEIIGWWPAFGEAFPTPDTHEVVV 33
>03_06_0421 -
33797836-33797992,33798450-33798549,33798646-33798700,
33798965-33799085,33799759-33799856,33800004-33800105,
33800196-33800360,33800441-33800522,33800960-33801117,
33801214-33801339,33801533-33801616,33802011-33802100,
33802188-33802258,33803420-33803513,33803585-33803671,
33804258-33804306,33805450-33805538,33805691-33805756,
33806009-33806071,33806174-33806282,33806376-33806446,
33807212-33807298,33807390-33807535,33808848-33808953,
33809429-33809494,33809672-33809741,33810839-33811206
Length = 959
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +2
Query: 89 LSLVSISVMSPQQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKR 250
+ ++S+ + +P+ T+QEL F T++ ++GI E K G+G V R
Sbjct: 268 VDVLSVMIENPEATLQELLECMPGPDFPTGGTIVGNQGILEAYK-TGRGRVVMR 320
>09_04_0198 +
15528576-15528645,15528746-15528893,15529182-15529377,
15529512-15529604,15530403-15530462,15530563-15530637,
15531072-15531152,15531262-15531603,15531967-15531999
Length = 365
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -1
Query: 658 GSPVPD--DHQALVPVQFLQSSHH*TFATRSRCWLVFIEASVFTIEIKLESISEDVDSWD 485
G+ +P+ + + V+ + S H ++ S CW+ + S++ + + + ++V SWD
Sbjct: 206 GAAIPNWLEVDGALAVESIHFSEH-FISSLSDCWMHVKKQSLYASADEFQDLVKEVLSWD 264
Query: 484 V*SLRDR 464
+ SL R
Sbjct: 265 IRSLSQR 271
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -2
Query: 273 PPIASAVSLLTSSPFPQ-NLASSSMPSSCMTV-ESTSKQTQSAVLNNSWTVCW 121
PPI+S++SL+ S+P P +A P + S+S + S+ + S + W
Sbjct: 4 PPISSSLSLMASNPIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSSTSCSAAW 56
>11_04_0045 + 12731603-12732487,12732572-12732647,12744290-12745371
Length = 680
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 721 VTHHVTPEANEAVSRWASLGIGSPVPDDHQALV 623
V H V P A E + R A+ G P PD H+ +V
Sbjct: 26 VAHGVLP-AKEIIGRRAACGEAFPTPDTHEVVV 57
>08_02_1063 +
24024030-24024506,24024803-24024856,24024965-24025118,
24025314-24025388,24025511-24025788,24026023-24026253,
24026522-24026620,24026740-24026889,24027830-24027976,
24028525-24028575,24028647-24028819,24029018-24029147,
24029361-24029458,24029655-24029892,24030634-24030837,
24031003-24031083,24031296-24031535
Length = 959
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 605 LKELHGYQRLV-IVGDGATDAEASPPADGFIGFGGNV 712
+ EL +LV +VGDG DA A AD I GG V
Sbjct: 799 ISELQKEHKLVAMVGDGINDAAALASADVGIAMGGGV 835
>10_08_0933 + 21661209-21662813
Length = 534
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 702 PKPMKPSAGGLASASVA--PSPTITRRWYPCNSFSRLTTKPLPPDLDVGSFSSKPA 541
P P+ P+A A+A+ A P+ T R + N RL +P P L + + + PA
Sbjct: 15 PSPLNPNARAAAAAAAAAPPNAVSTTRTHLAN-LDRLLVRPPPLPLPLQNKGAPPA 69
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -2
Query: 537 SPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGV 373
SPL NL LA + ++ + + S TGSI T LS N+ T + P +
Sbjct: 192 SPLPDNLGDLAALRVLFLANCSLTGSIPPSVGKLTNLVDLDLSSNNLTGEIPPSI 246
>07_01_0880 + 7301042-7301548
Length = 168
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 696 PMKPSAGGLASASVAPSPTITRRWYPCNS 610
P + GG A ++P P+ + +W CNS
Sbjct: 48 PASAADGGYAMPPISPPPSYSYQWSSCNS 76
>05_02_0028 - 5764980-5766374
Length = 464
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 709 VTPEANEAVSRWASLGIGSPVPDDHQAL 626
++P+A A+ R A G+GSPV D H +L
Sbjct: 314 LSPDAAGALRRGAWAGVGSPVNDVHVSL 341
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 407 HERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 517
H++ +YL + GF IEP LN+ I++ +N L
Sbjct: 266 HKKLQNLYLYANGFTGEIEPNVSALNLVEIDVSSNEL 302
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -2
Query: 315 MSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 151
+SS F S L ++S +L +PF ++A S+ PSS T ST QT S+
Sbjct: 182 ISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPT-GSTPTQTPSS 235
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 377 PGITELVKELHERGVIVYLVSGGFRSLIE 463
PG+ LVK LH GV + L S R I+
Sbjct: 93 PGVERLVKHLHRNGVPLALASNSVRRNID 121
>12_01_0836 -
7801155-7801454,7801850-7801914,7802237-7802562,
7805936-7806372
Length = 375
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +2
Query: 500 IFANRLKFYFNGEYAGFDENEPTSRSGGKGLVVRRLKELHGYQRLVIVGDGATDAEASPP 679
+ N+L +F G AG + GG G +R + H + R V A+A PP
Sbjct: 194 VITNKLLQFFRGFDAGAGVDVLVDVGGGVGATLRMITARHPHLRGVNYDLPHVIAQA-PP 252
Query: 680 ADGFIGFGGNV 712
+G GG++
Sbjct: 253 VEGVEHIGGSM 263
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = -2
Query: 330 TLGLMMSSLFFKASWNVILPPIASAVSLLTSSPFPQNLASSSMPSS-----CMTVESTSK 166
+LG +M+SL K S +LPP+ S + ++PF NL S+ + ++ C T+ S
Sbjct: 319 SLGELMNSL--KVS---VLPPLGSMIITSIAAPFADNLISNGVDTTKVRKICQTIAFLSP 373
Query: 165 QT 160
T
Sbjct: 374 AT 375
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 27.9 bits (59), Expect = 8.6
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +2
Query: 221 FCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVK 400
FC +GD VKR E + G + + + +R + QIRE +E P+R P + + +
Sbjct: 194 FCDEGDPVKREDEERLDG-PGYDD-----VGGVRKQLAQIRELVE-LPLR-HPKLFQTLG 245
Query: 401 ELHERGVIVYLVSGGFRSLI 460
+G+++Y G ++L+
Sbjct: 246 VRPPKGILLYGPPGTGKTLL 265
>04_03_0145 - 11799689-11800108
Length = 139
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = -2
Query: 696 PMKPSAGGLASASVAPSPTITRRWYPCNSFSRLTTKPLPPDLDVGSFSSKPAYSP 532
PM P GG +A+ A PT W+ +S S + T D + S++P +P
Sbjct: 14 PMAPGCGGWCTAATAAGPT-NHPWFSSDSKSLVFTS------DYAAVSAEPVSNP 61
>04_03_0036 -
9950353-9950379,9950753-9950791,9951021-9951194,
9951287-9951415,9951782-9952012,9952655-9952732,
9953035-9953055,9953790-9953855,9953935-9954015,
9954148-9954920,9955461-9955654,9956723-9956817,
9958190-9958219,9958334-9958453,9959185-9959262,
9959428-9959505,9960459-9960488,9960614-9960739,
9961239-9961379,9963416-9963532,9963619-9963670,
9963759-9963890,9964668-9964720,9964816-9964911,
9965255-9965260,9965416-9965561,9966494-9966629,
9966885-9967038,9968017-9968154,9968268-9968614
Length = 1295
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = -1
Query: 355 LNEFSDLTDVRPDDVQSLLQGFLECHIAAHCFRRQSFNLVSFPAELGQFIDAFILYDGRV 176
LN FS D P+ +S Q L+ A S ++V F + G+ + ++YDGRV
Sbjct: 349 LNNFSSHPDGSPEISKSNFQVELDAAKATWL----SNDIVMFSTKAGEMLLLTVVYDGRV 404
Query: 175 YIEANAVRCPEQLLDS 128
+ ++ +L S
Sbjct: 405 VQRLDLMKSKASVLSS 420
>03_05_0056 -
20349217-20349484,20349563-20350032,20350049-20350424,
20350546-20350568
Length = 378
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +2
Query: 578 GGKGLVVRRLKELHGYQRL-VIVGDGATDAEASPPA 682
GG G RR K HG+ L + D +ASPPA
Sbjct: 230 GGSGKKRRRCKRCHGFGHLQKTCNEPVYDPDASPPA 265
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,915,297
Number of Sequences: 37544
Number of extensions: 441948
Number of successful extensions: 1910
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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