Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c22
(737 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061473-1|AAL29021.1| 495|Drosophila melanogaster LD44032p pro... 73 3e-13
AE014297-686|AAF54178.1| 495|Drosophila melanogaster CG10435-PA... 73 3e-13
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 31 2.2
AE014134-2111|AAF53131.1| 378|Drosophila melanogaster CG16960-P... 30 3.8
AE014134-444|AAO41162.1| 374|Drosophila melanogaster CG15396-PB... 30 3.8
BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p pro... 29 6.6
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 29 6.6
AY058379-1|AAL13608.1| 967|Drosophila melanogaster GH14389p pro... 29 6.6
AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-P... 29 6.6
AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-P... 29 6.6
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 29 6.6
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 29 8.7
AE014134-3383|AAN11114.1| 372|Drosophila melanogaster CG31622-P... 29 8.7
>AY061473-1|AAL29021.1| 495|Drosophila melanogaster LD44032p
protein.
Length = 495
Score = 73.3 bits (172), Expect = 3e-13
Identities = 73/240 (30%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Frame = +3
Query: 9 MDGVPVKISEKYKKPPSI-ELPYTLIE--CPIRAQNVVDN--VKYCSSFESNVLIKVKEL 173
M+ VPVKI E+YK PP++ LP + R D+ +Y E VL + +
Sbjct: 1 MEDVPVKIVERYKPPPAVYHLPQATLNRLSQFREGFYTDHPDYQYDCQLERAVLSQAQRW 60
Query: 174 RRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSD 353
R ++ ++ ER R +A +KE L V YPS D+++ D
Sbjct: 61 RHLRRQQREERASRQERRKEERQRALEA----RQKEML-----GAVDYPSADDLSS-DED 110
Query: 354 EKNEINCDSNIGDTKETAEVSITDINIIPATTANESQNILQPTLVKF-NYEGSLLDDPDP 530
EK + D ++ + P TA + +P + N+ L P
Sbjct: 111 EKERKKNEPEQRDEEQQQQPP-------PPITAESRDSSHEPKSISVCNFHNIL--QPTI 161
Query: 531 LETYKLNAKVSKIQYNHNIDTLTYRDFE-NDTSSPFDNVELKTINDMELLAQVL-QSQKE 704
L T + VS + +L Y DFE N S+PFDN+ELKTIND+++LAQVL Q+Q E
Sbjct: 162 LSTTPV---VSPQTLHKRNSSLNYADFEYNMNSTPFDNIELKTINDLDILAQVLHQTQLE 218
>AE014297-686|AAF54178.1| 495|Drosophila melanogaster CG10435-PA
protein.
Length = 495
Score = 73.3 bits (172), Expect = 3e-13
Identities = 73/240 (30%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Frame = +3
Query: 9 MDGVPVKISEKYKKPPSI-ELPYTLIE--CPIRAQNVVDN--VKYCSSFESNVLIKVKEL 173
M+ VPVKI E+YK PP++ LP + R D+ +Y E VL + +
Sbjct: 1 MEDVPVKIVERYKPPPAVYHLPQATLNRLSQFREGFYTDHPDYQYDCQLERAVLSQAQRW 60
Query: 174 RRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSD 353
R ++ ++ ER R +A +KE L V YPS D+++ D
Sbjct: 61 RHLRRQQREERASRQERRKEERQRALEA----RQKEML-----GAVDYPSADDLSS-DED 110
Query: 354 EKNEINCDSNIGDTKETAEVSITDINIIPATTANESQNILQPTLVKF-NYEGSLLDDPDP 530
EK + D ++ + P TA + +P + N+ L P
Sbjct: 111 EKERKKNEPEQRDEEQQQQPP-------PPITAESRDSSHEPKSISVCNFHNIL--QPTI 161
Query: 531 LETYKLNAKVSKIQYNHNIDTLTYRDFE-NDTSSPFDNVELKTINDMELLAQVL-QSQKE 704
L T + VS + +L Y DFE N S+PFDN+ELKTIND+++LAQVL Q+Q E
Sbjct: 162 LSTTPV---VSPQTLHKRNSSLNYADFEYNMNSTPFDNIELKTINDLDILAQVLHQTQLE 218
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 30.7 bits (66), Expect = 2.2
Identities = 35/144 (24%), Positives = 63/144 (43%)
Frame = +3
Query: 276 KERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIPATTAN 455
K++ K + S P+ + + ++ + C+ D +E + P TT+
Sbjct: 834 KDKPKPRTPNMTSNPAQKHLE-MFQEKLRKARCERKEQDPEEKKTNIRMGDDESPPTTSR 892
Query: 456 ESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTLTYRDFENDTSSPF 635
++ L+P ++ N P P++TY N + S ++ +LT R
Sbjct: 893 AARAFLKPRIIDDNI-------PTPMDTYS-NPQKSPSDFDSK--SLTQR---------V 933
Query: 636 DNVELKTINDMELLAQVLQSQKES 707
+N+E K N MELL + L+S KES
Sbjct: 934 ENIEKKIDNLMELLFKCLESTKES 957
>AE014134-2111|AAF53131.1| 378|Drosophila melanogaster CG16960-PA
protein.
Length = 378
Score = 29.9 bits (64), Expect = 3.8
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 702 LFDFVILELVT---PYHL*FSTQHYQKGWMYHFQNL-YTSRCLYCDCTEFC 562
L DF I +T P HL Y+K + F++L +TS CL+C FC
Sbjct: 34 LVDFTITSFITILFPVHLILGM--YKKPQIQVFRSLHFTSECLFCSYKFFC 82
>AE014134-444|AAO41162.1| 374|Drosophila melanogaster CG15396-PB,
isoform B protein.
Length = 374
Score = 29.9 bits (64), Expect = 3.8
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = -3
Query: 630 GWMYHFQNLYTSRCLYC---DCTEFCSL*HLICMF 535
GW+ F +++T +Y DCT CSL H++ F
Sbjct: 43 GWLTWFISMWTQSVIYAQTIDCTLDCSLRHILTFF 77
>BT021370-1|AAX33518.1| 884|Drosophila melanogaster LP07893p protein.
Length = 884
Score = 29.1 bits (62), Expect = 6.6
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 14/165 (8%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLIKVKELRRI---KETKKNERKHRXXXXXXXXXXXXDAI 260
P N++ N+ SS S++L+ I + + A
Sbjct: 512 PHIGSNIISNIDQSSSCSSSMLLSATSNSNIGGGSSSSSSSSSSTTLPACSSATTTTTAS 571
Query: 261 ALAEEKERLKQL---NVSEVSYPSTDEINPLT-SDEKNEINCDSNIGDTKETAEVSITDI 428
AL + +K + N + + ST+ S+ + +C + + TA + T
Sbjct: 572 ALTTSRGPVKNVTPNNSNSSGHTSTNSCRSSNNSNNSSNSSCQTIEMTSWATAATNTTST 631
Query: 429 NIIPATTANESQNILQ-------PTLVKFNYEGSLLDDPDPLETY 542
ATT + Q +++ P + K YE ++ P P E+Y
Sbjct: 632 TATTATTGTQCQMLVKTELKGENPQVTKMQYEAHVMPPPTPPESY 676
>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p protein.
Length = 2201
Score = 29.1 bits (62), Expect = 6.6
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 14/165 (8%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLIKVKELRRI---KETKKNERKHRXXXXXXXXXXXXDAI 260
P N++ N+ SS S++L+ I + + A
Sbjct: 1257 PHIGSNIISNIDQSSSCSSSMLLSATSNSNIGGGSSSSSSSSSSTTLPACSSATTTTTAS 1316
Query: 261 ALAEEKERLKQL---NVSEVSYPSTDEINPLT-SDEKNEINCDSNIGDTKETAEVSITDI 428
AL + +K + N + + ST+ S+ + +C + + TA + T
Sbjct: 1317 ALTTSRGPVKNVTPNNSNSSGHTSTNSCRSSNNSNNSSNSSCQTIEMTSWATAATNTTST 1376
Query: 429 NIIPATTANESQNILQ-------PTLVKFNYEGSLLDDPDPLETY 542
ATT + Q +++ P + K YE ++ P P E+Y
Sbjct: 1377 TATTATTGTQCQMLVKTELKGENPQVTKMQYEAHVMPPPTPPESY 1421
>AY058379-1|AAL13608.1| 967|Drosophila melanogaster GH14389p
protein.
Length = 967
Score = 29.1 bits (62), Expect = 6.6
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 14/165 (8%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLIKVKELRRI---KETKKNERKHRXXXXXXXXXXXXDAI 260
P N++ N+ SS S++L+ I + + A
Sbjct: 23 PHIGSNIISNIDQSSSCSSSMLLSATSNSNIGGGSSSSSSSSSSTTLPACSSATTTTTAS 82
Query: 261 ALAEEKERLKQL---NVSEVSYPSTDEINPLT-SDEKNEINCDSNIGDTKETAEVSITDI 428
AL + +K + N + + ST+ S+ + +C + + TA + T
Sbjct: 83 ALTTSRGPVKNVTPNNSNSSGHTSTNSCRSSNNSNNSSNSSCQTIEMTSWATAATNTTST 142
Query: 429 NIIPATTANESQNILQ-------PTLVKFNYEGSLLDDPDPLETY 542
ATT + Q +++ P + K YE ++ P P E+Y
Sbjct: 143 TATTATTGTQCQMLVKTELKGENPQVTKMQYEAHVMPPPTPPESY 187
>AE014298-2950|ABC67193.1| 1456|Drosophila melanogaster CG32529-PD,
isoform D protein.
Length = 1456
Score = 29.1 bits (62), Expect = 6.6
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 14/165 (8%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLIKVKELRRI---KETKKNERKHRXXXXXXXXXXXXDAI 260
P N++ N+ SS S++L+ I + + A
Sbjct: 512 PHIGSNIISNIDQSSSCSSSMLLSATSNSNIGGGSSSSSSSSSSTTLPACSSATTTTTAS 571
Query: 261 ALAEEKERLKQL---NVSEVSYPSTDEINPLT-SDEKNEINCDSNIGDTKETAEVSITDI 428
AL + +K + N + + ST+ S+ + +C + + TA + T
Sbjct: 572 ALTTSRGPVKNVTPNNSNSSGHTSTNSCRSSNNSNNSSNSSCQTIEMTSWATAATNTTST 631
Query: 429 NIIPATTANESQNILQ-------PTLVKFNYEGSLLDDPDPLETY 542
ATT + Q +++ P + K YE ++ P P E+Y
Sbjct: 632 TATTATTGTQCQMLVKTELKGENPQVTKMQYEAHVMPPPTPPESY 676
>AE014298-2949|AAF49024.2| 1280|Drosophila melanogaster CG32529-PC,
isoform C protein.
Length = 1280
Score = 29.1 bits (62), Expect = 6.6
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 14/165 (8%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLIKVKELRRI---KETKKNERKHRXXXXXXXXXXXXDAI 260
P N++ N+ SS S++L+ I + + A
Sbjct: 336 PHIGSNIISNIDQSSSCSSSMLLSATSNSNIGGGSSSSSSSSSSTTLPACSSATTTTTAS 395
Query: 261 ALAEEKERLKQL---NVSEVSYPSTDEINPLT-SDEKNEINCDSNIGDTKETAEVSITDI 428
AL + +K + N + + ST+ S+ + +C + + TA + T
Sbjct: 396 ALTTSRGPVKNVTPNNSNSSGHTSTNSCRSSNNSNNSSNSSCQTIEMTSWATAATNTTST 455
Query: 429 NIIPATTANESQNILQ-------PTLVKFNYEGSLLDDPDPLETY 542
ATT + Q +++ P + K YE ++ P P E+Y
Sbjct: 456 TATTATTGTQCQMLVKTELKGENPQVTKMQYEAHVMPPPTPPESY 500
>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
isoform A protein.
Length = 2529
Score = 29.1 bits (62), Expect = 6.6
Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 14/165 (8%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLIKVKELRRI---KETKKNERKHRXXXXXXXXXXXXDAI 260
P N++ N+ SS S++L+ I + + A
Sbjct: 1585 PHIGSNIISNIDQSSSCSSSMLLSATSNSNIGGGSSSSSSSSSSTTLPACSSATTTTTAS 1644
Query: 261 ALAEEKERLKQL---NVSEVSYPSTDEINPLT-SDEKNEINCDSNIGDTKETAEVSITDI 428
AL + +K + N + + ST+ S+ + +C + + TA + T
Sbjct: 1645 ALTTSRGPVKNVTPNNSNSSGHTSTNSCRSSNNSNNSSNSSCQTIEMTSWATAATNTTST 1704
Query: 429 NIIPATTANESQNILQ-------PTLVKFNYEGSLLDDPDPLETY 542
ATT + Q +++ P + K YE ++ P P E+Y
Sbjct: 1705 TATTATTGTQCQMLVKTELKGENPQVTKMQYEAHVMPPPTPPESY 1749
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 28.7 bits (61), Expect = 8.7
Identities = 18/68 (26%), Positives = 34/68 (50%)
Frame = +3
Query: 264 LAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIPA 443
L+ EK+R K+L+ E YP E P T+D ++ N + + E++ + D+
Sbjct: 960 LSAEKQR-KELSEMEAEYPIKSERIPSTADLESRFNSLTKQMSSSESSSKTPIDLKDEDR 1018
Query: 444 TTANESQN 467
+ + S+N
Sbjct: 1019 PSGSSSKN 1026
>AE014134-3383|AAN11114.1| 372|Drosophila melanogaster CG31622-PB,
isoform B protein.
Length = 372
Score = 28.7 bits (61), Expect = 8.7
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 588 DTLTYRDFENDTSSPFDNVELKTINDMELLAQV-LQSQKESXCQL 719
++L Y + ++ T + FDN + T + +LLA + L+SQ++S L
Sbjct: 61 ESLYYMETKSQTGNTFDNAVILTTSVTQLLANLWLRSQQKSQVNL 105
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,655,179
Number of Sequences: 53049
Number of extensions: 518766
Number of successful extensions: 1559
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -