Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c22
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 29 0.13
Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical p... 30 2.0
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 29 2.6
AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical ... 29 2.6
Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical... 29 3.4
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 3.4
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical p... 28 6.0
U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical pr... 28 6.0
U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical pr... 28 7.9
U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical p... 28 7.9
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 29.5 bits (63), Expect(2) = 0.13
Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 192 KKNERKHRXXXXXXXXXXXXDAIAL-AEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEI 368
+K +KH+ D L E+KE+ K+ + ++ P + D+++++
Sbjct: 794 RKKHKKHKKEKKSKKEKRDEDEDDLDTEKKEKKKERKYQDDKDEDSNRKEPRSLDDEDKV 853
Query: 369 NCDSNIGDTKE 401
D N D KE
Sbjct: 854 ELDKNFADKKE 864
Score = 23.0 bits (47), Expect(2) = 0.13
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +3
Query: 165 KELRRIKETKKNERKHR 215
K++++ K++KKN++ HR
Sbjct: 765 KKMKKHKKSKKNKKHHR 781
>Z81557-1|CAB04535.1| 343|Caenorhabditis elegans Hypothetical
protein F59A1.3 protein.
Length = 343
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 497 IKLN-KCWLKNVLRLICSCCRYYINICYANFSGFFCITYVTITVNFIFLIRSQWIYL 330
I LN C+ +L L+ Y+ +C N S F YVTI + + ++W+ L
Sbjct: 91 IALNCTCYSMIMLLLVFHFLYRYLAVCKPNMSKLFSFPYVTILILIFVFVSAEWLVL 147
>Z19152-11|CAA79540.2| 1003|Caenorhabditis elegans Hypothetical
protein B0464.5a protein.
Length = 1003
Score = 29.9 bits (64), Expect = 2.0
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Frame = +3
Query: 276 KERLKQLN-VSEVSYPSTDEINPLTSDEKNEIN-----CDSNIG-----DTKETAEV--S 416
K+R K+ N +E S+ EIN T +E+ E+N + N G D + V +
Sbjct: 85 KQRNKKENSTNEEEEISSQEINTSTQNEETEVNLVFASAEDNGGVASNFDISDALMVTSN 144
Query: 417 ITDINIIPATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTL 596
I++++ +P T E + + Q ++V N + S DD L++ ++ S N +
Sbjct: 145 ISEVSKLPETLCEEGETVQQKSVVNEN-DHSNEDDEQSLQSQD-GSRCSDEDMNSCVSAS 202
Query: 597 TYRDFENDTSS 629
D E+ S
Sbjct: 203 DEEDVESQDDS 213
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical protein
F29G6.3b protein.
Length = 1785
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = +3
Query: 318 PSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIPATTANESQNILQPTLVKFN 497
PS + +TS+ ++ N I ET ++ T N +P T ++SQN+ + TL K N
Sbjct: 1459 PSVRKTTGITSEIEHRHNFVEKIPSKHETPKLPETH-NYVP--TVHKSQNLDRSTLEKHN 1515
Query: 498 Y 500
Y
Sbjct: 1516 Y 1516
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 375 DSNIGDTKETAEVSITDINIIPATTANESQNILQPTLVKFNYEGSLLD 518
D+ K+ A +S ++I+P AN + ++L P+++ + EGS LD
Sbjct: 339 DAEAMSDKKIALLSPQFMSILPDEVANNTISLLSPSILSLHGEGSDLD 386
>AC006749-1|AAV28322.1| 1372|Caenorhabditis elegans Hypothetical
protein Y39D8B.1 protein.
Length = 1372
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/47 (31%), Positives = 30/47 (63%)
Frame = +3
Query: 378 SNIGDTKETAEVSITDINIIPATTANESQNILQPTLVKFNYEGSLLD 518
S IGD K+ A +S ++I+P AN++ ++ P+++ + EG+ L+
Sbjct: 432 SEIGD-KKVALLSPQFMSILPDEVANDTVSLFSPSILSLHGEGTDLE 477
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 390 DTKETAEVSITDINIIPATTANESQNILQPTLVKFNYEGSLLD 518
D ++ A +S ++++P AN++ N+L P++ + GS LD
Sbjct: 1149 DDRKIALMSPQFMSVLPDEQANDTVNLLSPSVFALHESGSELD 1191
>Z92789-5|CAB07217.1| 397|Caenorhabditis elegans Hypothetical
protein H02I12.3 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 37 KNTKNLQVLSYRTP**NAQSELKMLWTTLNI 129
KN+K SY T N S+LK++WTTL I
Sbjct: 265 KNSKTPASRSYSTRSTNVYSKLKLVWTTLLI 295
>AF067608-13|AAK95862.1| 1634|Caenorhabditis elegans Hypothetical
protein B0511.12 protein.
Length = 1634
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 345 TSDEKNEINCDSNIGDTKET-AEVSITDINIIPATTANESQNILQP 479
T DEK E D + G T A + + + ++P+T+ +++Q + P
Sbjct: 5 TEDEKGEKTSDEDDGKQPSTSAAAAASSVTVLPSTSNSQTQTVQLP 50
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 90 PIRAQNVVDNVKYCSSFESNVLI 158
P +D +KYC SF++NVL+
Sbjct: 1177 PAEPHTALDIIKYCESFKTNVLV 1199
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/83 (24%), Positives = 31/83 (37%)
Frame = +3
Query: 165 KELRRIKETKKNERKHRXXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPL 344
KE + +E KK E K EEK++L E D+ +
Sbjct: 70 KEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERKDKKDER 129
Query: 345 TSDEKNEINCDSNIGDTKETAEV 413
D+K E N + + + K+ EV
Sbjct: 130 KEDDKKEENKEKSKDEEKKKDEV 152
>U41107-11|AAC71161.1| 454|Caenorhabditis elegans Hypothetical
protein F55C12.1a protein.
Length = 454
Score = 28.3 bits (60), Expect = 6.0
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 1/157 (0%)
Frame = +3
Query: 252 DAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNI-GDTKETAEVSITDI 428
D AL + ++ QLN Y +E N SDE+ + ++++ + E +TD
Sbjct: 42 DQDALNDFSSQMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD- 100
Query: 429 NIIPATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTLTYRD 608
+ + +L + S L LET N K ++ I +
Sbjct: 101 ------NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKYQMLE-KDLISVKKDAE 153
Query: 609 FENDTSSPFDNVELKTINDMELLAQVLQSQKESXCQL 719
N+ + N KT N +E +++ +E QL
Sbjct: 154 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQL 190
>U41107-9|AAK73877.1| 471|Caenorhabditis elegans Hypothetical
protein F55C12.1b protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.0
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 1/157 (0%)
Frame = +3
Query: 252 DAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNI-GDTKETAEVSITDI 428
D AL + ++ QLN Y +E N SDE+ + ++++ + E +TD
Sbjct: 59 DQDALNDFSSQMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD- 117
Query: 429 NIIPATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTLTYRD 608
+ + +L + S L LET N K ++ I +
Sbjct: 118 ------NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKYQMLE-KDLISVKKDAE 170
Query: 609 FENDTSSPFDNVELKTINDMELLAQVLQSQKESXCQL 719
N+ + N KT N +E +++ +E QL
Sbjct: 171 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQL 207
>U41107-8|AAN39670.1| 468|Caenorhabditis elegans Hypothetical
protein F55C12.1d protein.
Length = 468
Score = 28.3 bits (60), Expect = 6.0
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 1/157 (0%)
Frame = +3
Query: 252 DAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNI-GDTKETAEVSITDI 428
D AL + ++ QLN Y +E N SDE+ + ++++ + E +TD
Sbjct: 56 DQDALNDFSSQMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD- 114
Query: 429 NIIPATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTLTYRD 608
+ + +L + S L LET N K ++ I +
Sbjct: 115 ------NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKYQMLE-KDLISVKKDAE 167
Query: 609 FENDTSSPFDNVELKTINDMELLAQVLQSQKESXCQL 719
N+ + N KT N +E +++ +E QL
Sbjct: 168 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQL 204
>U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical
protein F55C12.5c protein.
Length = 543
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/102 (19%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 264 LAEEKERLKQLNVSEVS-YPSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIP 440
++ K+ + S+VS +PS ++ ++ E+ + S+ G + + + + D
Sbjct: 119 VSSRKKNHSECGTSDVSPHPSMRSLDSISKSEERIASRRSSGGSSDQLKQSKVPD----- 173
Query: 441 ATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSK 566
+ +ES IL+ + K +L+D DP + + + + + K
Sbjct: 174 -NSNDESVEILEEIVAKRTANQNLIDPADPSDPFLVQSFIHK 214
>U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical
protein F55C12.5a protein.
Length = 876
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/102 (19%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 264 LAEEKERLKQLNVSEVS-YPSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIP 440
++ K+ + S+VS +PS ++ ++ E+ + S+ G + + + + D
Sbjct: 70 VSSRKKNHSECGTSDVSPHPSMRSLDSISKSEERIASRRSSGGSSDQLKQSKVPD----- 124
Query: 441 ATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSK 566
+ +ES IL+ + K +L+D DP + + + + + K
Sbjct: 125 -NSNDESVEILEEIVAKRTANQNLIDPADPSDPFLVQSFIHK 165
>U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical
protein F55C12.5b protein.
Length = 925
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/102 (19%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Frame = +3
Query: 264 LAEEKERLKQLNVSEVS-YPSTDEINPLTSDEKNEINCDSNIGDTKETAEVSITDINIIP 440
++ K+ + S+VS +PS ++ ++ E+ + S+ G + + + + D
Sbjct: 119 VSSRKKNHSECGTSDVSPHPSMRSLDSISKSEERIASRRSSGGSSDQLKQSKVPD----- 173
Query: 441 ATTANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSK 566
+ +ES IL+ + K +L+D DP + + + + + K
Sbjct: 174 -NSNDESVEILEEIVAKRTANQNLIDPADPSDPFLVQSFIHK 214
>Z81453-4|CAB03794.1| 283|Caenorhabditis elegans Hypothetical
protein B0250.6 protein.
Length = 283
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/118 (19%), Positives = 50/118 (42%), Gaps = 3/118 (2%)
Frame = -1
Query: 506 SFIIKLNKCWLKNV---LRLICSCCRYYINICYANFSGFFCITYVTITVNFIFLIRSQWI 336
+F++ ++ W K + L ++ + CR+ +++ Y I Y+ ++ F+I++ +
Sbjct: 23 NFLLLISIFWRKRIPVNLHMMLTYCRFGVDLVYTIVLLILKIYYMLTRISNDFIIKNLYF 82
Query: 335 YLVCTRVRHFRHIQLFQPFFFLCQSYGIXXXXXXXXXXX*SMFPFVFLRLLNPSQLFN 162
LV +I+ F + + FVFL ++ S+LFN
Sbjct: 83 LLVFP-AASIGNIRSVLTFLIALERVIAIYFPIFFHIYRQKLPNFVFLLIILSSELFN 139
>U41107-10|AAN39669.1| 416|Caenorhabditis elegans Hypothetical
protein F55C12.1c protein.
Length = 416
Score = 27.9 bits (59), Expect = 7.9
Identities = 32/151 (21%), Positives = 56/151 (37%), Gaps = 1/151 (0%)
Frame = +3
Query: 270 EEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNI-GDTKETAEVSITDINIIPAT 446
E K + QLN Y +E N SDE+ + ++++ + E +TD
Sbjct: 10 ESKYAMNQLNSFTKRYSELEERNMSLSDERTRLKTENSVLKERMHNLEEQLTD------- 62
Query: 447 TANESQNILQPTLVKFNYEGSLLDDPDPLETYKLNAKVSKIQYNHNIDTLTYRDFENDTS 626
+ + +L + S L LET N K ++ I + N+ +
Sbjct: 63 NEDRFKQLLSDEKARGTESMSRLKREKELETESWNLKYQMLE-KDLISVKKDAERSNEET 121
Query: 627 SPFDNVELKTINDMELLAQVLQSQKESXCQL 719
N KT N +E +++ +E QL
Sbjct: 122 KRIRNELEKTENKLEEAQLLVEGMEEERIQL 152
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 27.9 bits (59), Expect = 7.9
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 1/126 (0%)
Frame = +3
Query: 39 KYKKPPSIELPYTLIECPIR-AQNVVDNVKYCSSFESNVLIKVKELRRIKETKKNERKHR 215
K KK + P ++ + P++ A + + + + + V KV+E KE KK E K
Sbjct: 24 KGKKKNTSAAPVSIRKPPMKPACSTIQPTDFPPASAAPVAPKVEEK---KEEKKEEEKKA 80
Query: 216 XXXXXXXXXXXXDAIALAEEKERLKQLNVSEVSYPSTDEINPLTSDEKNEINCDSNIGDT 395
EEK+++ E D+ + DEK E + + + +
Sbjct: 81 DDEKKKTEEKDDKKSKKTEEKDKISVKKTQETKSERKDKKDEKKEDEKKEESKEKSKDEE 140
Query: 396 KETAEV 413
K+ EV
Sbjct: 141 KKKDEV 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,780,457
Number of Sequences: 27780
Number of extensions: 289289
Number of successful extensions: 1046
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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