Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c17
(385 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC127707-1|AAI27708.1| 344|Homo sapiens transmembrane protein 8... 30 2.2
BC127706-1|AAI27707.1| 343|Homo sapiens transmembrane protein 8... 30 2.2
AL450998-2|CAH70850.1| 343|Homo sapiens novel protein protein. 30 2.2
AK056235-1|BAB71125.1| 760|Homo sapiens protein ( Homo sapiens ... 30 2.9
EF125210-1|ABL84748.1| 648|Homo sapiens MORC family CW-type zin... 29 3.9
EF125209-1|ABL84747.1| 900|Homo sapiens MORC family CW-type zin... 29 3.9
AL158821-2|CAI43049.1| 937|Homo sapiens MORC family CW-type zin... 29 3.9
U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein. 29 5.1
BC035913-1|AAH35913.1| 737|Homo sapiens PCNT protein protein. 29 5.1
AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein. 29 5.1
AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein. 29 5.1
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 28 8.9
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 28 8.9
AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome assoc... 28 8.9
>BC127707-1|AAI27708.1| 344|Homo sapiens transmembrane protein 82
protein.
Length = 344
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 284 ASLLGRPASSPHRYPCTFYCLHRSSRNC 201
A+LLG A HR+ C Y LH S R C
Sbjct: 160 ATLLGLGARRLHRHVCRLYELHSSQRYC 187
>BC127706-1|AAI27707.1| 343|Homo sapiens transmembrane protein 82
protein.
Length = 343
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 284 ASLLGRPASSPHRYPCTFYCLHRSSRNC 201
A+LLG A HR+ C Y LH S R C
Sbjct: 160 ATLLGLGARRLHRHVCRLYELHSSQRYC 187
>AL450998-2|CAH70850.1| 343|Homo sapiens novel protein protein.
Length = 343
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -3
Query: 284 ASLLGRPASSPHRYPCTFYCLHRSSRNC 201
A+LLG A HR+ C Y LH S R C
Sbjct: 160 ATLLGLGARRLHRHVCRLYELHSSQRYC 187
>AK056235-1|BAB71125.1| 760|Homo sapiens protein ( Homo sapiens
cDNA FLJ31673 fis, clone NT2RI2005061. ).
Length = 760
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -3
Query: 266 PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQ-----GSRSIPVELAVQ 102
P+ P R+ C +Y H R C + E + +DL L + K Q + +P+E
Sbjct: 267 PSMLPARWFC-YYNSHPKYRRCSVPEEQELIDEDLCLSKAKKQEQTVEEKKKMPMENENH 325
Query: 101 AIFSKP 84
+FS P
Sbjct: 326 QVFSNP 331
>EF125210-1|ABL84748.1| 648|Homo sapiens MORC family CW-type zinc
finger protein 4 protein.
Length = 648
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -3
Query: 266 PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQ-----GSRSIPVELAVQ 102
P+ P R+ C +Y H R C + E + +DL L + K Q + +P+E
Sbjct: 192 PSMLPARWFC-YYNSHPKYRRCSVPEEQELTDEDLCLSKAKKQEQTVEEKKKMPMENENH 250
Query: 101 AIFSKP 84
+FS P
Sbjct: 251 QVFSNP 256
>EF125209-1|ABL84747.1| 900|Homo sapiens MORC family CW-type zinc
finger protein 4 protein.
Length = 900
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -3
Query: 266 PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQ-----GSRSIPVELAVQ 102
P+ P R+ C +Y H R C + E + +DL L + K Q + +P+E
Sbjct: 444 PSMLPARWFC-YYNSHPKYRRCSVPEEQELTDEDLCLSKAKKQEQTVEEKKKMPMENENH 502
Query: 101 AIFSKP 84
+FS P
Sbjct: 503 QVFSNP 508
>AL158821-2|CAI43049.1| 937|Homo sapiens MORC family CW-type zinc
finger 4 protein.
Length = 937
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -3
Query: 266 PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQ-----GSRSIPVELAVQ 102
P+ P R+ C +Y H R C + E + +DL L + K Q + +P+E
Sbjct: 444 PSMLPARWFC-YYNSHPKYRRCSVPEEQELTDEDLCLSKAKKQEQTVEEKKKMPMENENH 502
Query: 101 AIFSKP 84
+FS P
Sbjct: 503 QVFSNP 508
>U52962-1|AAD10838.1| 3321|Homo sapiens kendrin protein.
Length = 3321
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 81
L++ YQ+DL+LL+Q+ QG+R S+ V L+ + KP+
Sbjct: 527 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 571
>BC035913-1|AAH35913.1| 737|Homo sapiens PCNT protein protein.
Length = 737
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 81
L++ YQ+DL+LL+Q+ QG+R S+ V L+ + KP+
Sbjct: 514 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 558
>AF515282-1|AAP46636.1| 3336|Homo sapiens pericentrin B protein.
Length = 3336
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 81
L++ YQ+DL+LL+Q+ QG+R S+ V L+ + KP+
Sbjct: 527 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 571
>AB007862-1|BAA23698.3| 3284|Homo sapiens KIAA0402 protein.
Length = 3284
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR------SIPVELAVQAIFSKPQ 81
L++ YQ+DL+LL+Q+ QG+R S+ V L+ + KP+
Sbjct: 554 LRDAEKTYQEDLTLLQQRLQGAREDALLDSVEVGLSCVGLEEKPE 598
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 236 TFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQ 102
T + + R +LQE QQ+LS LRQ Q ++ EL+ Q
Sbjct: 1058 TLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 236 TFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQ 102
T + + R +LQE QQ+LS LRQ Q ++ EL+ Q
Sbjct: 1058 TLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102
>AF022655-1|AAC06349.1| 2442|Homo sapiens cep250 centrosome associated
protein protein.
Length = 2442
Score = 28.3 bits (60), Expect = 8.9
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 236 TFYCLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQ 102
T + + R +LQE QQ+LS LRQ Q ++ EL+ Q
Sbjct: 1058 TLSLMEKEQRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQ 1102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,255,247
Number of Sequences: 237096
Number of extensions: 1107488
Number of successful extensions: 1941
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1941
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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