Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c17
(385 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071733-1|AAL49355.1| 77|Drosophila melanogaster RH45008p pro... 60 1e-09
AE014298-1291|AAF46455.1| 77|Drosophila melanogaster CG9034-PA... 60 1e-09
BT022515-1|AAY54931.1| 187|Drosophila melanogaster IP07908p pro... 28 4.8
BT016088-1|AAV36973.1| 690|Drosophila melanogaster LD41913p pro... 28 4.8
BT011178-1|AAR88539.1| 690|Drosophila melanogaster RE44946p pro... 28 4.8
AY089560-1|AAL90298.1| 1102|Drosophila melanogaster LP04725p pro... 28 4.8
AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-P... 28 4.8
AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-P... 28 4.8
AE014297-637|AAF54142.2| 187|Drosophila melanogaster CG10919-PA... 28 4.8
AE014296-3195|AAF49125.1| 690|Drosophila melanogaster CG8765-PA... 28 4.8
>AY071733-1|AAL49355.1| 77|Drosophila melanogaster RH45008p
protein.
Length = 77
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/74 (37%), Positives = 39/74 (52%)
Frame = +2
Query: 77 MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 256
M+A++ + L+++ WNEIP+I + NY DGDNRRYK YVV
Sbjct: 1 MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60
Query: 257 MRPDDPRVKLIRKE 298
R DDPR +R +
Sbjct: 61 YRHDDPRALKVRND 74
>AE014298-1291|AAF46455.1| 77|Drosophila melanogaster CG9034-PA
protein.
Length = 77
Score = 60.1 bits (139), Expect = 1e-09
Identities = 28/74 (37%), Positives = 39/74 (52%)
Frame = +2
Query: 77 MAAASRKSLGQLIQQGWNEIPEIFASTXXXXXXXXXXXXXAYNYVKNDGDNRRYKGTYVV 256
M+A++ + L+++ WNEIP+I + NY DGDNRRYK YVV
Sbjct: 1 MSASAARGSTSLLKRAWNEIPDIVGGSALALAGIVMATIGVANYYAKDGDNRRYKLGYVV 60
Query: 257 MRPDDPRVKLIRKE 298
R DDPR +R +
Sbjct: 61 YRHDDPRALKVRND 74
>BT022515-1|AAY54931.1| 187|Drosophila melanogaster IP07908p
protein.
Length = 187
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 266 PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLL 153
P S HR P CL R + +E+ DQ+++++ LL
Sbjct: 93 PTFSKHRIPLQIRCLERYHNS--KREYADQFKREIKLL 128
>BT016088-1|AAV36973.1| 690|Drosophila melanogaster LD41913p
protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR--SIPVELAVQAIFSKPQPFIYACRPYF*STEL 36
LQEH QQ ++L G SIP EL + ++ S+ Q P++ ST++
Sbjct: 10 LQEHQQPQQQHVNLSIDPSLGENVVSIPKELILISLVSQEQSLYNPKHPHYRSTKI 65
>BT011178-1|AAR88539.1| 690|Drosophila melanogaster RE44946p
protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR--SIPVELAVQAIFSKPQPFIYACRPYF*STEL 36
LQEH QQ ++L G SIP EL + ++ S+ Q P++ ST++
Sbjct: 10 LQEHQQPQQQHVNLSIDPSLGENVVSIPKELILISLVSQEQSLYNPKHPHYRSTKI 65
>AY089560-1|AAL90298.1| 1102|Drosophila melanogaster LP04725p
protein.
Length = 1102
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 227 CLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQAIFSKPQPFIYACRPYF 51
CLHR++ C++ Y DL L + EL V A + ++A +PYF
Sbjct: 12 CLHRATGRCLMTSQNHGYAVDLEQLPDGWS-------ELFVNANDGTNEGIVHASKPYF 63
>AE014298-2442|AAS65389.1| 1387|Drosophila melanogaster CG18572-PB,
isoform B protein.
Length = 1387
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 227 CLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQAIFSKPQPFIYACRPYF 51
CLHR++ C++ Y DL L + EL V A + ++A +PYF
Sbjct: 297 CLHRATGRCLMTSQNHGYAVDLEQLPDGWS-------ELFVNANDGTNEGIVHASKPYF 348
>AE014298-2441|AAF48639.3| 2224|Drosophila melanogaster CG18572-PA,
isoform A protein.
Length = 2224
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -3
Query: 227 CLHRSSRNCMLQEHPDQYQQDLSLLRQKFQGSRSIPVELAVQAIFSKPQPFIYACRPYF 51
CLHR++ C++ Y DL L + EL V A + ++A +PYF
Sbjct: 297 CLHRATGRCLMTSQNHGYAVDLEQLPDGWS-------ELFVNANDGTNEGIVHASKPYF 348
>AE014297-637|AAF54142.2| 187|Drosophila melanogaster CG10919-PA
protein.
Length = 187
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 266 PASSPHRYPCTFYCLHRSSRNCMLQEHPDQYQQDLSLL 153
P S HR P CL R + +E+ DQ+++++ LL
Sbjct: 93 PTFSKHRIPLQIRCLERYHNS--KREYADQFKREIKLL 128
>AE014296-3195|AAF49125.1| 690|Drosophila melanogaster CG8765-PA,
isoform A protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 197 LQEHPDQYQQDLSLLRQKFQGSR--SIPVELAVQAIFSKPQPFIYACRPYF*STEL 36
LQEH QQ ++L G SIP EL + ++ S+ Q P++ ST++
Sbjct: 10 LQEHQQPQQQHVNLSIDPSLGENVVSIPKELILISLVSQEQSLYNPKHPHYRSTKI 65
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,570,594
Number of Sequences: 53049
Number of extensions: 311745
Number of successful extensions: 732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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