Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4c13
         (463 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z25470-1|CAA80962.1|  325|Homo sapiens melanocortin receptor pro...    29   7.8  
U08353-1|AAB60376.1|  325|Homo sapiens melanocortin-5 receptor p...    29   7.8  
BC095531-1|AAH95531.1|  325|Homo sapiens melanocortin 5 receptor...    29   7.8  
BC069545-1|AAH69545.1|  325|Homo sapiens melanocortin 5 receptor...    29   7.8  
BC069153-1|AAH69153.1|  325|Homo sapiens melanocortin 5 receptor...    29   7.8  
AY268429-1|AAP23196.1|  325|Homo sapiens melanocortin 5 receptor...    29   7.8  
AK027234-1|BAB15701.1|  502|Homo sapiens protein ( Homo sapiens ...    29   7.8  

>Z25470-1|CAA80962.1|  325|Homo sapiens melanocortin receptor
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343 VYCVK*CYLFNMYLTLLFVNSVV--IFYVFINKLLYCSFKK 459
           +YC +    FNMYL L+  NSV+  + Y F ++ +  +FK+
Sbjct: 268 LYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKE 308


>U08353-1|AAB60376.1|  325|Homo sapiens melanocortin-5 receptor
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343 VYCVK*CYLFNMYLTLLFVNSVV--IFYVFINKLLYCSFKK 459
           +YC +    FNMYL L+  NSV+  + Y F ++ +  +FK+
Sbjct: 268 LYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKE 308


>BC095531-1|AAH95531.1|  325|Homo sapiens melanocortin 5 receptor
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343 VYCVK*CYLFNMYLTLLFVNSVV--IFYVFINKLLYCSFKK 459
           +YC +    FNMYL L+  NSV+  + Y F ++ +  +FK+
Sbjct: 268 LYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKE 308


>BC069545-1|AAH69545.1|  325|Homo sapiens melanocortin 5 receptor
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343 VYCVK*CYLFNMYLTLLFVNSVV--IFYVFINKLLYCSFKK 459
           +YC +    FNMYL L+  NSV+  + Y F ++ +  +FK+
Sbjct: 268 LYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKE 308


>BC069153-1|AAH69153.1|  325|Homo sapiens melanocortin 5 receptor
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343 VYCVK*CYLFNMYLTLLFVNSVV--IFYVFINKLLYCSFKK 459
           +YC +    FNMYL L+  NSV+  + Y F ++ +  +FK+
Sbjct: 268 LYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKE 308


>AY268429-1|AAP23196.1|  325|Homo sapiens melanocortin 5 receptor
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 343 VYCVK*CYLFNMYLTLLFVNSVV--IFYVFINKLLYCSFKK 459
           +YC +    FNMYL L+  NSV+  + Y F ++ +  +FK+
Sbjct: 268 LYCSRFMSHFNMYLILIMCNSVMDPLIYAFRSQEMRKTFKE 308


>AK027234-1|BAB15701.1|  502|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23581 fis, clone LNG13607. ).
          Length = 502

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
 Frame = -2

Query: 381 VHVKKITSFNTIH----LFNQYRLSLYTYKGHNTLYTNKGHNILSAIQ*TLKR 235
           +++ K  +F+ IH    LF+ Y  ++YT+ G N    + G  + S ++ TL R
Sbjct: 164 MNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLESTGLGLSSRLRTTLNR 216


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,990,918
Number of Sequences: 237096
Number of extensions: 730338
Number of successful extensions: 902
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)