Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4c12
         (399 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.083
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   2.4  
DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.       23   4.1  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   9.5  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 0.083
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 292 REGSNKVDVEHIEKCL-PQLMLDFP*INKDAT 384
           R G+ + D+EHI+  L   LM  F  IN+DAT
Sbjct: 44  RPGNGRYDIEHIDPSLCTHLMYGFFGINEDAT 75


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 2.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 356 SSISWGKHFSICSTSTLLEPSLCACLTARRH 264
           + +SW  H   C+T  L       CL  R H
Sbjct: 760 NQLSWKSHVEYCTTKALRTAKALGCL-MRNH 789


>DQ974174-1|ABJ52814.1|  391|Anopheles gambiae serpin 18 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +2

Query: 350 CWTSLKLIKMLQMEK 394
           CWT LKL K    EK
Sbjct: 281 CWTDLKLPKFFVREK 295


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 191  DPATLLSNVKSTIKKMWPNVWS 256
            DP  ++  VK+  K+    VWS
Sbjct: 973  DPLGIVDTVKAKAKQFMQRVWS 994


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 382,065
Number of Sequences: 2352
Number of extensions: 6482
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)