Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4c10
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   3.0  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   5.3  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   5.3  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   5.3  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 628  ANRSQTGPLKPCNTN 584
            A +S+  P+KPC TN
Sbjct: 1308 AEQSELSPIKPCQTN 1322


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 319 ALSLANNGLDVKIISYVETDPLPEVLNN 402
           A S+A  GLD+K +++V    LP+ +++
Sbjct: 479 ATSVAARGLDIKNVNHVVNYDLPKSIDD 506


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/26 (34%), Positives = 19/26 (73%)
 Frame = +3

Query: 12  KICELLIVYVVNLLFICRYLPTYLSR 89
           K+ ++L++  V+ +F+C  LP+Y+ R
Sbjct: 370 KVTKMLLI--VSTVFVCLNLPSYIVR 393


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   SVKKICELLIVYVVNLLFICRYLPTYLSR 89
           S  K+ ++L++  V+ +F+C  LP+Y+ R
Sbjct: 316 SQMKVTKMLLI--VSSVFVCLNLPSYVMR 342


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 780,837
Number of Sequences: 2352
Number of extensions: 16758
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)