Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4c08
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   7.0  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.0  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -1

Query: 425 SHSSVPMEAYDYSSIPYGFSGKMPAILNHVFNSML 321
           SHSS  ++ Y+ ++I YG +   P +     N +L
Sbjct: 816 SHSSEKIKTYELNTITYG-TASAPFLAIRTLNQVL 849


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -1

Query: 335  FNSMLRGLPANNHVTNHSRDQRLIICANVQSYTFAIKEKATK 210
            + +M   LP+ +++TN++   RL  C +      +I  K+ K
Sbjct: 2990 YGNMTSILPSYHNITNNNSVMRLEYCIDCSQDASSITSKSYK 3031


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,123
Number of Sequences: 2352
Number of extensions: 11274
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)