Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c03
(704 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0267 + 21938300-21938371,21938963-21939235,21940665-219412... 76 2e-14
04_04_1099 - 30886361-30886591,30886739-30886941,30887030-308875... 75 7e-14
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 69 3e-12
07_03_0968 - 23027940-23028149,23028800-23029002,23029610-230301... 59 4e-09
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 37 0.018
03_03_0040 - 13999040-13999179,13999524-13999638,13999759-139998... 36 0.024
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 35 0.055
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 34 0.13
03_06_0437 - 33912326-33912520,33912870-33912998,33913147-339133... 33 0.17
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 32 0.39
11_01_0209 - 1642473-1642579,1642783-1642826,1642935-1643023,164... 31 0.67
08_02_1613 + 28236989-28238593 31 0.67
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 31 0.67
12_01_0210 - 1593732-1593823,1594730-1594773,1594895-1594983,159... 31 1.2
12_01_0209 - 1583401-1583498,1583879-1583922,1584285-1584373,158... 30 2.1
11_01_0208 - 1628020-1628117,1628282-1628325,1628790-1628878,162... 30 2.1
11_01_0207 - 1620192-1620280,1620408-1620451,1620703-1620791,162... 29 2.7
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 29 2.7
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 29 2.7
01_01_1224 - 9888726-9888820,9889042-9889085,9889194-9889282,988... 29 2.7
02_02_0424 + 10074206-10074287,10074389-10074485,10074584-100746... 29 3.6
01_01_0161 - 1385408-1385566,1385815-1385943,1386164-1386322,138... 29 3.6
10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676 29 4.8
01_06_1620 + 38697960-38698131,38698532-38700732 29 4.8
09_01_0042 + 764349-764763,764853-764902,765096-765172,766179-76... 28 6.3
>09_06_0267 +
21938300-21938371,21938963-21939235,21940665-21941202,
21941288-21941490,21941603-21941827
Length = 436
Score = 76.2 bits (179), Expect = 2e-14
Identities = 30/83 (36%), Positives = 56/83 (67%)
Frame = +1
Query: 400 ERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIF 579
+ A+ G+G+F +LA G+ SE M+++ +SF+ S Q + +L+ Q + + S++F
Sbjct: 35 DEALISMGFGKFQAFVLAYSGMAKISEAMEMMLLSFVGQSVQAEWELSAQAESLITSVVF 94
Query: 580 IGMMVGAYAWGSVADSLGRKRVL 648
+GM+VGAY+WG V+D+ GR++ +
Sbjct: 95 VGMLVGAYSWGIVSDNYGRRQAV 117
>04_04_1099 -
30886361-30886591,30886739-30886941,30887030-30887555,
30887751-30887988,30888592-30888695,30888784-30889059,
30889216-30889218
Length = 526
Score = 74.5 bits (175), Expect = 7e-14
Identities = 29/80 (36%), Positives = 56/80 (70%)
Frame = +1
Query: 406 AIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIG 585
A+ +G+GR+ ++L+ G+ +E M+++ +SF+ PS Q + LT+ + + SI+F+G
Sbjct: 15 ALLSSGFGRYQILILSYAGVGLIAEAMEMMLLSFVGPSVQLEWKLTSHQESMITSIVFVG 74
Query: 586 MMVGAYAWGSVADSLGRKRV 645
M++GAY WG V+D+ GR+++
Sbjct: 75 MLIGAYTWGVVSDNYGRRQL 94
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/87 (32%), Positives = 54/87 (62%)
Frame = +1
Query: 379 NSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKG 558
N E + A+E G+G+F ++LA G+ E M+++ +SF+ P + + +++ + +
Sbjct: 195 NMETYTTDEALEFMGFGKFQLLVLAYAGMGWVVESMEIMLLSFVGPLVREEWNISAENES 254
Query: 559 WLNSIIFIGMMVGAYAWGSVADSLGRK 639
L+S++F GM++GA WG V+D GR+
Sbjct: 255 LLSSVVFAGMLIGASGWGFVSDKYGRR 281
>07_03_0968 -
23027940-23028149,23028800-23029002,23029610-23030138,
23030342-23030579,23031121-23031168,23031199-23031494
Length = 507
Score = 58.8 bits (136), Expect = 4e-09
Identities = 27/93 (29%), Positives = 54/93 (58%)
Frame = +1
Query: 358 SDPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLD 537
++ E+ E + A+ G+GRF ++LA + +E M+V+ +SF+ PS + +
Sbjct: 6 AEEEEEEEEETYTTDDALTRAGFGRFQALVLAYACVGWVAEAMEVMLLSFVGPSVKAEWG 65
Query: 538 LTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGR 636
++ +G ++S++F GM++GA G ++D GR
Sbjct: 66 VSGAAEGLVSSVVFAGMLIGACLGGLISDRYGR 98
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/40 (42%), Positives = 23/40 (57%)
Frame = +1
Query: 529 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
D L+ G S++ IG M+GA G +ADSLGRK +
Sbjct: 1019 DFGLSNSEYGVFGSVLTIGAMIGALTSGRLADSLGRKTTM 1058
>03_03_0040 -
13999040-13999179,13999524-13999638,13999759-13999818,
14000007-14000060,14000274-14000333,14000418-14000480,
14000552-14000595,14000671-14000755,14000904-14001028,
14001368-14001432,14001460-14001518,14001678-14001743,
14001870-14001935,14002019-14002105,14002168-14002257,
14002378-14002440,14003153-14003419
Length = 502
Score = 36.3 bits (80), Expect = 0.024
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 2/117 (1%)
Frame = +1
Query: 301 GPGSKTAELGVVPSVKKSKSDPEKGSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSE 480
G G TA L ++ K+ + D EK N D G G ++L+ V S
Sbjct: 26 GGGEVTAPL-LLRQHKQGRGDEEKIQNDAGGDGGGRRGGGGGGSMSMLMLSTAVAVCGSF 84
Query: 481 EMDV-ISMSFILPSAQCD-LDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRV 645
E + S S D + L+ S++ IG M+GA G +AD LGRK V
Sbjct: 85 EFGTCVGYSAPTQSGIVDEVGLSISQFALFGSVLTIGAMIGAVTSGRLADFLGRKMV 141
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 35.1 bits (77), Expect = 0.055
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 442 MLLAVCGLVSTSEEMDVISMSFILPSAQC---DLDLTTQTKGWLNSIIFIGMMVGAYAWG 612
M++A G+ + +S+ + P+ DL L+ SII IG M+GA A G
Sbjct: 23 MVIASTGVAVLGSFVFGVSIGYSAPTQSKIREDLQLSLSEYSVFGSIITIGAMIGAVASG 82
Query: 613 SVADSLGRKRV 645
+AD GRK V
Sbjct: 83 HLADISGRKGV 93
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 529 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 639
DLDLT S+ +G MVGA A G +A+ +GRK
Sbjct: 93 DLDLTLSEFSVFGSLSNVGAMVGAIASGQMAEYIGRK 129
>03_06_0437 -
33912326-33912520,33912870-33912998,33913147-33913317,
33913877-33913993,33914150-33914800
Length = 420
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 626 ESATEPQAYAPTIIPMKIILFSHPLV*VVRSKSHCAEGR--MNDIEMTSISSEVLTRP 459
E PQ P I+LF P++ VR++ + E D++M I VLTRP
Sbjct: 210 EEDVPPQEVYPEGTQFMILLFERPIIYDVRARPNLVESTSGSRDLQMVKIGLRVLTRP 267
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 32.3 bits (70), Expect = 0.39
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +1
Query: 529 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 639
DL LT S+ +G MVGA A G +A+ +GRK
Sbjct: 93 DLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRK 129
>11_01_0209 -
1642473-1642579,1642783-1642826,1642935-1643023,
1643114-1643158,1643484-1643591,1643691-1643776,
1643917-1644004,1644211-1644387,1644720-1644795,
1644898-1644947,1645030-1645092,1645332-1645434,
1645513-1645615,1645731-1645791,1646268-1646308,
1646792-1646825
Length = 424
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 511 LPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
L AQ + D+ G+L + +G A WG VAD +GRK V+
Sbjct: 29 LQVAQTEEDIGNYA-GFLGASYMVGRSFAAIFWGVVADRIGRKPVI 73
>08_02_1613 + 28236989-28238593
Length = 534
Score = 31.5 bits (68), Expect = 0.67
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Frame = +1
Query: 373 GSNSEKADFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFI----------LPSA 522
G ++ + A+++ +H+ + V G+ ++ D+ +S + + +
Sbjct: 5 GGEQQQLEVLHALDVAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYRVDGS 64
Query: 523 QCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRV 645
L +N + F+G + G +G + D LGRKRV
Sbjct: 65 PSPGTLPPHVSASVNGVAFVGTLSGQLFFGWLGDKLGRKRV 105
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 31.5 bits (68), Expect = 0.67
Identities = 18/83 (21%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 406 AIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFI---LPSAQCDLDLTTQTKGWLNSII 576
A+++ +H++ + + G+ ++ D+ S+S + L +L + I
Sbjct: 12 ALDIARTQLYHFIAIVIAGMGFFTDAYDLFSISLVADLLGHVYYHGELPRNIHAAVTGIA 71
Query: 577 FIGMMVGAYAWGSVADSLGRKRV 645
G + G +G + D +GRKRV
Sbjct: 72 LCGTVPGQLVFGWLGDKMGRKRV 94
>12_01_0210 -
1593732-1593823,1594730-1594773,1594895-1594983,
1595076-1595120,1595457-1595564,1595647-1595732,
1595872-1595959,1596159-1596335,1596531-1596606,
1596709-1596758,1596834-1596896,1597152-1597254,
1597337-1597439,1597559-1597619,1598119-1598159,
1599790-1599961
Length = 465
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 556 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
G+L + +G A WG VAD +GRK V+
Sbjct: 89 GFLGASYMVGRSFAAIFWGVVADRIGRKPVI 119
>12_01_0209 -
1583401-1583498,1583879-1583922,1584285-1584373,
1584911-1585018,1585158-1585243,1585385-1585472,
1585970-1586140,1586379-1586454,1586534-1586583,
1586692-1586754,1586839-1586892,1587038-1587140,
1587265-1587367,1587479-1587569,1587629-1587669,
1587801-1587879
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 556 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
G+L + IG + WG VAD +GRK V+
Sbjct: 68 GFLGASYMIGRGFASILWGMVADRIGRKPVI 98
>11_01_0208 -
1628020-1628117,1628282-1628325,1628790-1628878,
1628986-1629030,1629397-1629504,1629650-1629735,
1629870-1629957,1630275-1630445,1630718-1630793,
1630877-1630926,1631035-1631097,1631201-1631254,
1631398-1631500,1631626-1631728,1632038-1632098,
1632186-1632226,1632375-1632453
Length = 452
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +1
Query: 556 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
G+L + IG + WG VAD +GRK V+
Sbjct: 58 GFLGASYMIGRGFASILWGMVADRIGRKPVI 88
>11_01_0207 -
1620192-1620280,1620408-1620451,1620703-1620791,
1620870-1620914,1621441-1621548,1621638-1621723,
1622202-1622289,1622403-1622576,1623084-1623159,
1623256-1623305,1623392-1623454,1623689-1623791,
1623871-1623973,1624679-1624739,1624864-1624904,
1625076-1625154
Length = 432
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 556 GWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
G+L + IG + WG VAD +GRK ++
Sbjct: 58 GFLGASYMIGRCFASLFWGVVADRIGRKPII 88
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 529 DLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 639
DL L+ S+ +G MVGA A G +A+ +GRK
Sbjct: 94 DLKLSISEFSAFGSLSNVGAMVGAIASGQMAEYIGRK 130
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 437 TTCCWQYAVSSALPRRWTSSRCRSSYPRHSA 529
T CCW + AL R WT R RS H A
Sbjct: 538 TPCCWYFLWLVALNRCWTVYRLRSRGISHPA 568
>01_01_1224 -
9888726-9888820,9889042-9889085,9889194-9889282,
9889390-9889434,9889849-9889956,9890042-9890127,
9890324-9890411,9890669-9890872,9891251-9891326,
9891429-9891478,9891753-9891815,9891942-9891995,
9892079-9892181,9892266-9892368,9892563-9892623,
9892746-9892786,9893183-9893348
Length = 491
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 556 GWLNSIIFIGMMVGAYAWGSVADSLGRK 639
G++ + F+G + A WG AD GRK
Sbjct: 87 GFVGATYFLGRTISAVPWGIFADKYGRK 114
>02_02_0424 +
10074206-10074287,10074389-10074485,10074584-10074651,
10074727-10074859,10075102-10075137,10076109-10076208,
10076312-10076424,10076511-10076604,10077301-10077454,
10077563-10077706,10077802-10077875,10077949-10078037,
10078311-10078365,10078563-10078616
Length = 430
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +1
Query: 511 LPSAQCDLDLTTQT--KGWLNSIIFIGMMVGAYAWGSVADSLGRKR 642
L S DL T +G + SI G VG GS+AD +GR+R
Sbjct: 66 LESISTDLGFAGNTLAEGLVVSICLGGAFVGCLFSGSIADGIGRRR 111
>01_01_0161 -
1385408-1385566,1385815-1385943,1386164-1386322,
1387228-1387571,1387641-1387905,1387998-1388075,
1388207-1388260,1389341-1389361,1389453-1389578,
1389696-1389863,1389923-1390313,1390629-1390710,
1391175-1391536,1391806-1392630,1392956-1393476
Length = 1227
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 459 RSRQHFRGDGRHLDVVHPTLGTVRLRPHHSD*RMA---KQYNLHR 584
RS H + D H T+GT R+ PHHS R+A +Y HR
Sbjct: 826 RSYAHVQVDSPGTATRH-TVGTTRITPHHSRDRLATVRDEYPTHR 869
>10_01_0172 - 1928648-1930751,1932019-1932243,1933709-1934676
Length = 1098
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 99 LTNNKEEAHQIVTGKLYAVGS-ATPPSERRLSVPATTIQSR 218
LT+NKE + IVT + AVGS P + L P + + R
Sbjct: 421 LTDNKERSRIIVTSRFQAVGSTCCRPENKDLLYPISFLSPR 461
>01_06_1620 + 38697960-38698131,38698532-38700732
Length = 790
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 460 GLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRK 639
GL++ + M +S S + + +L + + K W+ II G+++ + S+ LGR+
Sbjct: 414 GLINLQDNMGELSNSIFIRLSASELPQSGKMKWWIVGIIIGGLVLSSGV--SILYFLGRR 471
Query: 640 RVL 648
R +
Sbjct: 472 RTI 474
>09_01_0042 +
764349-764763,764853-764902,765096-765172,766179-766236,
767481-767607,768665-768769,768842-769424,769470-769775,
770048-770139,770391-770440
Length = 620
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -1
Query: 383 ELEPFSGSDFDFLTEGTTPSSAVLEPGPF 297
E+ P SGS F+FLTE T S PG +
Sbjct: 354 EMMPVSGSPFNFLTETTIGSRIDQVPGGY 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,790,393
Number of Sequences: 37544
Number of extensions: 534652
Number of successful extensions: 1635
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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