Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4c03
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical p... 60 1e-09
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 36 0.021
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 36 0.021
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 36 0.021
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 36 0.021
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 34 0.086
U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical pr... 34 0.11
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 34 0.11
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.35
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.35
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical pr... 29 3.2
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 29 3.2
AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin syntha... 29 4.3
AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin syntha... 29 4.3
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 28 7.5
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 28 7.5
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 27 9.9
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 27 9.9
>Z22175-2|CAA80131.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +1
Query: 367 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 543
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 544 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
+ + + + +F GMM+ + WG + D GR++ L
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGL 152
>Z11115-20|CAA77460.2| 520|Caenorhabditis elegans Hypothetical
protein ZK637.1 protein.
Length = 520
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +1
Query: 367 EKGSNSEKA-DFERAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLT 543
++ +SEK + A+E G+GRF L + G+ ++ M+++ +S I P+ C+ ++
Sbjct: 58 QRSPDSEKTFTVDEAVEALGFGRFQLKLSILTGMAWMADAMEMMLLSLISPALACEWGIS 117
Query: 544 TQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVL 648
+ + + + +F GMM+ + WG + D GR++ L
Sbjct: 118 SVQQALVTTCVFSGMMLSSTFWGKICDRFGRRKGL 152
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Frame = +1
Query: 556 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL 648
GW+ + + FIG M+G++ G +AD +GRK+VL
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVL 177
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Frame = +1
Query: 556 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL 648
GW+ + + FIG M+G++ G +AD +GRK+VL
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVL 143
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Frame = +1
Query: 556 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL 648
GW+ + + FIG M+G++ G +AD +GRK+VL
Sbjct: 143 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVL 177
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Frame = +1
Query: 556 GWLNSII----FIGMMVGAYAWGSVADSLGRKRVL 648
GW+ + + FIG M+G++ G +AD +GRK+VL
Sbjct: 109 GWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVL 143
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 34.3 bits (75), Expect = 0.086
Identities = 16/73 (21%), Positives = 35/73 (47%)
Frame = +1
Query: 430 RFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWLNSIIFIGMMVGAYAW 609
R Y+ + + +V+ +D +++ +LP Q ++ G + ++ I M+G+
Sbjct: 5 RKDYISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPIC 64
Query: 610 GSVADSLGRKRVL 648
G + D RK V+
Sbjct: 65 GYLGDRFNRKYVM 77
>U12965-9|AAA20605.3| 522|Caenorhabditis elegans Hypothetical
protein F23F12.3 protein.
Length = 522
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +1
Query: 559 WLNSIIFIGMMVGAYAWGSVADSLGRKRV 645
W+ +I FIG +VGA +G + D GRK V
Sbjct: 98 WIATIQFIGALVGALVYGHLGDHFGRKPV 126
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 559 WLNSIIFIGMMVGAYAWGSVADSLGRKRV 645
W+ +I FIG+++GA +G + D GRK V
Sbjct: 98 WVATIQFIGVLIGAITYGHLGDHFGRKPV 126
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 428 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 249
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 118 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 174
Query: 248 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 150
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 175 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 207
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 428 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 249
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 248 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 150
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 428 PYPVSSIARSKSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL*GFLGP 249
P P SS S S SG+ G+T S+ + PG S + T + P
Sbjct: 325 PVPGSSSTIGSSTPSASSSSSGTMSTI--SGSTGSTVTVVPGSSSTFASSTP-IASSSSP 381
Query: 248 GSVSTILCGRAALYGGRGDTQTSLTGGSGATNS 150
GS T+ G ++ YG + +S + G+ +TNS
Sbjct: 382 GSTVTVAPGSSSTYGSSTPSASSSSSGTMSTNS 414
>Z99709-5|CAB16860.1| 246|Caenorhabditis elegans Hypothetical
protein C47B2.5 protein.
Length = 246
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 403 RAIELTGYGRFHYMLLAVCGLVSTSEEMDVISMSFILPSAQCDLDLTTQTKGWL 564
R EL G G +A CGL STS E+ V+ F L ++ Q + L
Sbjct: 188 RGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTL 241
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.2
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 553 KGWLNSIIFIGMMVGAYAWGSVADSLGRKRV 645
K + + ++G M G+ +G + D +GRK+V
Sbjct: 133 KATIQAAYYVGQMAGSTTFGMLGDRIGRKKV 163
>AY874872-1|AAX62733.1| 1668|Caenorhabditis elegans chitin synthase 2
protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 264 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 139
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>AF026210-2|AAB71283.2| 1668|Caenorhabditis elegans Chitin synthase
protein 2 protein.
Length = 1668
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/42 (28%), Positives = 17/42 (40%)
Frame = -3
Query: 264 RILGPRVSFYHPMRAGGFVWWSRGHSNVSHWGEWRYQQRIAC 139
R LG HP G VW+ + + HW + + I C
Sbjct: 887 RRLGAACGRIHPRGDGAMVWYQKFEYAIGHWLQKATEHMIGC 928
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 502 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKR 642
S L S + +L + W+ + ++G +G +G VAD GR+R
Sbjct: 134 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRR 183
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 502 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKR 642
S L S + +L + W+ + ++G +G +G VAD GR+R
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRR 166
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +1
Query: 502 SFILPSAQCDLDLTTQTKGWLN---SIIFIGMMVGAYAWGSVADSLGRKR 642
S L S + +L + W+ + ++G +G +G VAD GR+R
Sbjct: 117 STYLDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRR 166
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 583 GMMVGAYAWGSVADSLGRKRVL 648
G++VGA +G V+D+ GR++ L
Sbjct: 135 GVLVGAAIFGQVSDNFGRRKAL 156
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +1
Query: 583 GMMVGAYAWGSVADSLGRKRVL 648
G++VGA +G V+D+ GR++ L
Sbjct: 135 GVLVGAAIFGQVSDNFGRRKAL 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.131 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,793,538
Number of Sequences: 27780
Number of extensions: 379076
Number of successful extensions: 1018
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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