Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4b17
(751 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0239 - 28599452-28599564,28599685-28599799,28600051-286001... 40 0.002
03_03_0039 - 13986844-13986907,13987219-13987273,13987492-139876... 38 0.006
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 38 0.006
05_07_0152 + 28044733-28045032,28045131-28045220,28045770-280458... 37 0.015
05_07_0151 + 28038178-28038480,28038578-28038667,28039130-280391... 37 0.020
09_04_0005 + 13612060-13612291,13612381-13612510,13612726-136129... 35 0.060
11_06_0262 + 21771577-21772059,21772167-21773252 33 0.24
04_04_0481 - 25541355-25541849,25541933-25542535,25542730-255428... 33 0.32
10_01_0052 - 750902-751697,753077-753603,753696-753913,754012-75... 32 0.42
07_01_0365 + 2718707-2718839,2719335-2719405,2719512-2719955,272... 32 0.56
04_04_0593 - 26480036-26481438,26481915-26482083 32 0.56
10_06_0142 - 11175732-11176545,11176924-11177450,11177544-111777... 31 0.74
10_01_0055 - 785172-785997,786859-787394,787478-787695,787789-78... 31 1.3
04_04_1460 + 33764106-33764303,33764675-33766201 30 1.7
10_08_1057 + 22594419-22594466,22594710-22594776,22595053-225952... 30 2.3
10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 30 2.3
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 30 2.3
10_01_0061 + 815761-816117,817298-818002 29 3.0
10_08_0925 + 21604871-21605021,21605562-21605881,21606899-216078... 29 3.9
04_04_1022 + 30195703-30195753,30195925-30195987,30197535-301978... 29 3.9
05_03_0570 - 15587147-15587209,15588249-15588446 29 5.2
04_04_0345 - 24542869-24543540,24543725-24543805,24543845-245439... 29 5.2
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 29 5.2
03_02_0179 - 6201393-6202365,6202470-6202610,6202728-6202767,620... 28 6.9
01_06_1703 + 39301075-39301829,39302735-39303560 28 6.9
11_04_0376 - 16965504-16966101,16966212-16966416,16967175-169681... 28 9.1
01_05_0390 - 21720118-21720573,21720667-21721296,21721427-217217... 28 9.1
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 28 9.1
>05_07_0239 -
28599452-28599564,28599685-28599799,28600051-28600116,
28600270-28600329,28600571-28600617,28601118-28601202,
28601554-28601646,28601727-28601791,28601942-28602017,
28602110-28602175,28603082-28603141,28603400-28603489,
28603594-28603893
Length = 411
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +1
Query: 499 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 678
G+ SPT ++ S + T + S S+ + + + I S +A+ GRK +L++ AI
Sbjct: 81 GFSSPTQ---DAIISDLGLTLSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAI 137
Query: 679 PFIIGWILVIVAKV 720
P IIGW+ + AKV
Sbjct: 138 PNIIGWLAISFAKV 151
>03_03_0039 - 13986844-13986907,13987219-13987273,13987492-13987606,
13987652-13987774,13987962-13988015,13988352-13988411,
13988522-13988584,13988790-13988863,13989177-13989261,
13989376-13989456,13989764-13989856,13990275-13990339,
13990407-13990482,13990570-13990635,13991094-13991153,
13991233-13991322,13991755-13991817,13992502-13992625,
13993031-13993271,13993355-13993624,13993715-13994089,
13994178-13994381,13994455-13995136,13995231-13995279,
13995362-13995488,13995564-13996258,13996718-13996965
Length = 1433
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 583 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKV 720
S++ + + + + S LAD GRKTT+ L AI I+GW + A V
Sbjct: 1032 SVLTIGAMIGALTSGRLADSLGRKTTMGLAAIIGIVGWFTIYFANV 1077
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +1
Query: 517 LLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGW 696
L YL + QG W+VS + + LADKFGR T +L AIP +G
Sbjct: 76 LEYLAKDLGISENAVLQG-WVVSTTLAGATAGSFTGGALADKFGRTRTFILDAIPLAVGA 134
Query: 697 ILVIVA 714
L A
Sbjct: 135 FLSATA 140
>05_07_0152 +
28044733-28045032,28045131-28045220,28045770-28045829,
28045912-28045977,28046161-28046226,28046330-28046405,
28046721-28046785,28046879-28046971,28047302-28047322,
28047600-28047692,28047939-28047998,28048157-28048222,
28048314-28048373,28048498-28048612,28048738-28048850
Length = 447
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +1
Query: 616 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 717
I S +A+ GRK +L++ AIP IIGW+ + AK
Sbjct: 117 IASGQMAEYIGRKGSLMIAAIPNIIGWLAISFAK 150
>05_07_0151 +
28038178-28038480,28038578-28038667,28039130-28039189,
28039274-28039339,28039562-28039627,28039719-28039794,
28039972-28040036,28040115-28040192,28040362-28040442,
28040526-28040610,28040702-28040748,28040969-28041028,
28041179-28041244,28041327-28041386,28041524-28041638,
28041733-28041845
Length = 476
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 616 IPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAK 717
I S +A+ GRK +L++ A+P IIGW+ + AK
Sbjct: 118 IASGQMAEYIGRKGSLIIAAVPNIIGWLAISFAK 151
>09_04_0005 +
13612060-13612291,13612381-13612510,13612726-13612926,
13613086-13613185,13613513-13613559,13613871-13613964,
13614042-13614192,13614777-13614923,13614994-13615067,
13615288-13615376,13615840-13615954,13616104-13616301
Length = 525
Score = 35.1 bits (77), Expect = 0.060
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +1
Query: 577 IVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILVIVAKVLGQCCTSR 744
+VSI I+ + + S+ L D FG K TL + +IP I+G +L A L + R
Sbjct: 146 VVSIFIVGAFFGSLGSSALVDNFGCKRTLQIDSIPLILGALLSAQADSLDEMLLGR 201
>11_06_0262 + 21771577-21772059,21772167-21773252
Length = 522
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Frame = +1
Query: 586 IMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV--IVAKVLG 726
I+++ S+ + + S +L D+FGR+ LL G ++ L+ I+A LG
Sbjct: 339 ILVVVSSASTLASMFLVDRFGRRALLLAGGAQMLVSEALIGSIMAAKLG 387
>04_04_0481 -
25541355-25541849,25541933-25542535,25542730-25542837,
25542925-25543260,25543391-25543461,25543692-25543824
Length = 581
Score = 32.7 bits (71), Expect = 0.32
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 508 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 687
S LLY+ + +++ + IVS+ + + + ++ DKFGRK ++L+ F+
Sbjct: 48 SGALLYIRDDFTAVEKSTVLRETIVSMAVAGAIVGAGFGGWMNDKFGRKPSILIADSLFL 107
Query: 688 IGWILVIVA 714
G +++ +A
Sbjct: 108 AGALIMALA 116
>10_01_0052 -
750902-751697,753077-753603,753696-753913,754012-754114,
754337-754393
Length = 566
Score = 32.3 bits (70), Expect = 0.42
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 580 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVA 714
VSI I S TP+ A+LAD + GR T ++ IIG ++V V+
Sbjct: 89 VSIWIGTSFFTPLIGAFLADTYWGRYWTTVISLFIIIIGMLIVTVS 134
>07_01_0365 +
2718707-2718839,2719335-2719405,2719512-2719955,
2720660-2721802
Length = 596
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/81 (23%), Positives = 36/81 (44%)
Frame = +1
Query: 508 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 687
S LLY+ + S+ + IVS+ + + + + D++GR+T++L+ F
Sbjct: 48 SGALLYIRDDFPSVDKNTWLQEMIVSMAVAGAIIGAAIGGWANDRYGRRTSILVADALFF 107
Query: 688 IGWILVIVAKVLGQCCTSRGF 750
G ++ A Q R F
Sbjct: 108 AGAAVMASATGPAQLVVGRVF 128
>04_04_0593 - 26480036-26481438,26481915-26482083
Length = 523
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +1
Query: 499 GWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAI 678
G S ++Y++ + + T +Q +V + + S L + +D GRK T+ LGAI
Sbjct: 59 GVMSGAIIYIQKD---LHITEFQEEILVGCLSVVSLLGSLSGGRTSDAIGRKWTMALGAI 115
Query: 679 PFIIGWILVIVA 714
F G ++ A
Sbjct: 116 VFQAGAAIMTFA 127
>10_06_0142 -
11175732-11176545,11176924-11177450,11177544-11177761,
11177916-11177961,11178203-11178253
Length = 551
Score = 31.5 bits (68), Expect = 0.74
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 496 YGWPSPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLLLG 672
YG + YL S A Q VSI I TP+ A+LAD + GR T+++
Sbjct: 43 YGVSKNLVTYLTSVLHESNVNAAQS---VSIWIGSCFFTPLIGAFLADTYWGRYWTVVMS 99
Query: 673 AIPFIIGWILVIVA 714
+ I+G I++ V+
Sbjct: 100 ILVIILGMIVLTVS 113
>10_01_0055 -
785172-785997,786859-787394,787478-787695,787789-787891,
788723-788770
Length = 576
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 580 VSIMILCSALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKVLGQCCTS 741
VS + LTP+ A+LAD + GR T+++ +I G ++V V+ L TS
Sbjct: 86 VSAWVGACFLTPVVGAFLADTYWGRYWTIVVFLPVYITGMLIVTVSASLPMFLTS 140
>04_04_1460 + 33764106-33764303,33764675-33766201
Length = 574
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 604 ALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKVLGQ 729
+ +P+ A++AD F GR TLL GA+ + +++ ++ + Q
Sbjct: 37 SFSPVVGAFVADAFCGRFWTLLFGAVAAFVAMVVITLSATIRQ 79
>10_08_1057 +
22594419-22594466,22594710-22594776,22595053-22595270,
22595425-22595981,22596398-22597217
Length = 569
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Frame = +1
Query: 607 LTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKVL 723
LTP+ A+LAD + G+ T+ + + ++IG +++ + V+
Sbjct: 83 LTPVLGAFLADTYWGKYKTIAISTVFYLIGLLVITASAVI 122
>10_08_0784 +
20529526-20529604,20529996-20530562,20530687-20531639,
20532292-20532479,20532578-20533013
Length = 740
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 499 GWPSPTL----LYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLL 666
GW + T+ LY++ E + +G + +I + +T A +AD FGR+ L+
Sbjct: 19 GWDNATIAGAVLYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSGA-VADSFGRRPMLI 77
Query: 667 LGAIPFIIGWILVIVA 714
A+ + + ++++ A
Sbjct: 78 ASAVLYFVSGLVMLWA 93
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 603 GSNTDSIRLSRRQIRKKNYTASRSYTLHNRLDTCYR 710
G + D++ SRR +R S TL N L CYR
Sbjct: 65 GGDADAVSTSRRALRSAKIPESEFTTLPNGLKFCYR 100
>10_01_0061 + 815761-816117,817298-818002
Length = 353
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Frame = +1
Query: 607 LTPIPSAYLADKF-GRKTTLLL 669
LTP+ A++AD F GR+TT+LL
Sbjct: 91 LTPLVGAFIADSFLGRRTTILL 112
>10_08_0925 +
21604871-21605021,21605562-21605881,21606899-21607897,
21608085-21608126,21608190-21608249,21608915-21608959
Length = 538
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 595 LCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWILV 705
LC+ I + + D+FGR+ L+G I I+ + V
Sbjct: 335 LCATFANIMAMIVVDRFGRRKLFLVGGIQMILSQLAV 371
>04_04_1022 +
30195703-30195753,30195925-30195987,30197535-30197843,
30197934-30199292
Length = 593
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 601 SALTPIPSAYLADKF-GRKTTLLLGAIPFIIGWILVIVAKVL 723
S LTP+ A +AD F G T+L+ + +++G +LV + L
Sbjct: 111 SYLTPVFGAIIADTFWGNYNTILVSLVFYLLGMMLVTFSAFL 152
>05_03_0570 - 15587147-15587209,15588249-15588446
Length = 86
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Frame = +1
Query: 496 YGWPSPTLLYLESE--ESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKF-GRKTTLL 666
YG + ++YL +E E ++ + +W S+ +TPI AY+AD F GR T
Sbjct: 4 YGVAANLVVYLTTELREETVSSVRNVNNWTGSVW-----MTPIAGAYIADAFLGRFWTFT 58
Query: 667 LGAIPFI 687
+ ++ ++
Sbjct: 59 VSSLIYL 65
>04_04_0345 -
24542869-24543540,24543725-24543805,24543845-24543910,
24543991-24544098,24545101-24545436,24545516-24545586,
24546105-24546252
Length = 493
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/69 (20%), Positives = 35/69 (50%)
Frame = +1
Query: 508 SPTLLYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFI 687
S LLY+ + ++ + IVS+ ++ + + ++ D +GR+ + L+ + F
Sbjct: 53 SGALLYIRDDFPAVRDNYFLQETIVSMALVGAIIGAAGGGWINDTYGRRKSTLVADMLFA 112
Query: 688 IGWILVIVA 714
+G +++ A
Sbjct: 113 LGSLVMCAA 121
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 583 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL 702
S + L + + I ++ ++ FGRK TL + A+ ++IG IL
Sbjct: 88 SSLFLSAMVAGIFASPMSRAFGRKWTLFVAAVAYLIGAIL 127
>03_02_0179 -
6201393-6202365,6202470-6202610,6202728-6202767,
6204390-6204791,6205567-6205696
Length = 561
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 511 PTLLYLESEESSIPTTAY--QGSWIVSIMILCSALTP-IPSAYLADKFGRKTTLLLGAIP 681
PT+L + E+ Y QG + + + + LT ++Y + GR+ T+L+ +
Sbjct: 58 PTVLKKKHEDKESNYCKYDNQGLQLFTSSLYLAGLTATFFASYTTRRLGRRLTMLIAGVF 117
Query: 682 FIIGWILVIVAKVLGQCCTSR 744
FI+G I A+ L R
Sbjct: 118 FIVGVIFNGAAQNLAMLIVGR 138
>01_06_1703 + 39301075-39301829,39302735-39303560
Length = 526
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 604 ALTPIPSAYLADKF-GRKTTLLLGAIPFIIGW 696
++TP+ +AYLAD F GR T+LL ++G+
Sbjct: 47 SITPLVAAYLADAFLGRYWTILLFMAISVLGY 78
>11_04_0376 -
16965504-16966101,16966212-16966416,16967175-16968197,
16968241-16968892,16969025-16969387,16970095-16970451
Length = 1065
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -2
Query: 204 EVYKRNVITDEASFWKVYVLLACWFMMREERAQCRGIATVTSEQLNDVLVVCRTKGSGER 25
++Y N ++ + S W ++ A A IA + SE+ + +V +T GS R
Sbjct: 299 QMYNMNCLSPDES-WSLFKQTAFTEQENISPANLVEIARMVSEKCKGLPLVIKTVGSILR 357
Query: 24 FE*NEL 7
FE NE+
Sbjct: 358 FETNEI 363
>01_05_0390 -
21720118-21720573,21720667-21721296,21721427-21721749,
21721844-21721973
Length = 512
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 583 SIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWIL 702
S + L + + + ++ + K GRK T+L G F+IG +L
Sbjct: 86 SSLYLAALIASLFASVITRKLGRKMTMLGGGFIFLIGAVL 125
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = +1
Query: 520 LYLESEESSIPTTAYQGSWIVSIMILCSALTPIPSAYLADKFGRKTTLLLGAIPFIIGWI 699
L++ +E I + ++ + + AL+ + +ADK+GRK +++ I II
Sbjct: 125 LHIAKQEEDI---GFYAGFVGASYMFGRALSSVIWGIVADKYGRKPIIIITLISIIIFNT 181
Query: 700 LVIVAKVLGQCCTSRG 747
L ++ TSRG
Sbjct: 182 LFGLSSSYWMALTSRG 197
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,289,597
Number of Sequences: 37544
Number of extensions: 298488
Number of successful extensions: 851
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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