Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4b12
(803 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical pr... 32 0.55
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 31 0.73
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 31 0.73
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 31 0.73
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.73
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 31 0.73
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.97
AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical ... 30 1.7
Z81514-3|CAB04190.1| 78|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z78064-3|CAB01512.1| 157|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z74045-3|CAA98551.1| 165|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical ... 29 5.1
AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical ... 29 5.1
Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical pr... 28 6.8
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 28 6.8
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 28 6.8
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 28 6.8
U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide re... 28 6.8
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 28 6.8
U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associa... 28 6.8
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 28 6.8
AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein. 28 6.8
AC024882-11|AAX22280.1| 333|Caenorhabditis elegans Seven tm rec... 28 6.8
AC024882-10|AAF60929.1| 341|Caenorhabditis elegans Seven tm rec... 28 6.8
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 28 6.8
Z81514-1|CAB04188.1| 144|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z68337-8|CAA92749.2| 241|Caenorhabditis elegans Hypothetical pr... 28 9.0
U55364-4|AAA97972.1| 382|Caenorhabditis elegans Prion-like-(q/n... 28 9.0
U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical p... 28 9.0
U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical pr... 28 9.0
U29244-16|AAQ23126.1| 172|Caenorhabditis elegans Hypothetical p... 28 9.0
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 28 9.0
>Z81497-2|CAB04078.1| 781|Caenorhabditis elegans Hypothetical
protein F10C2.5 protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.55
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 431 FEIFEQIYSENGEYRPDIQV-KIQDNATETVTKAILSMAEPSKFEQEPDMGENSNGQSEE 607
FE+ E++ E+ + + +++ K+++N+ KA+L + E + D NG++ +
Sbjct: 546 FEVDEKLKKESEKRKIELEAEKVKENSH----KAMLKVREILVRAHQKDEAMQRNGETSD 601
Query: 608 SKRKLNRRRYTDF--RKVALEMRNRQRTVE-EKLDKLINI 718
S RKL + Y + LE N++ +E E+L L +I
Sbjct: 602 SARKLMDQLYKAYPNHTAELENLNKEAIIEFEELQHLEDI 641
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2
Query: 443 EQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKL 622
E+ ENGE R + KI + + I MA +F+ MGE+ +G+ R +
Sbjct: 347 EKEMEENGETREKVIPKIGEGVGMVDDEPIDPMATVCQFDYHCRMGESCSGRVRFVDRNV 406
Query: 623 NRRRYTDFRK 652
RY F+K
Sbjct: 407 TVCRYDMFKK 416
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.73
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +2
Query: 419 KWPYFEIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEP---SKFEQEPDMGENS 589
K Y E ++Y + E +IQ Q+ E + + +L E + +E EN+
Sbjct: 428 KKKYEEERVKLYQQLDEKDDEIQKVSQE--LEKLRQQVLLQEEALGTMRENEELIREENN 485
Query: 590 NGQSE-ESKRKLNRRRYTDFRKVALEMRNRQRTVEEKLDKLINIVQESNNIXRDR 751
Q E E K++ + T ++A+ + RQ E KL + + +VQE N DR
Sbjct: 486 RFQKEAEDKQQEGKEMMTALEEIAVNLDVRQAECE-KLKRELEVVQEDNQSLEDR 539
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.73
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +2
Query: 419 KWPYFEIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEP---SKFEQEPDMGENS 589
K Y E ++Y + E +IQ Q+ E + + +L E + +E EN+
Sbjct: 428 KKKYEEERVKLYQQLDEKDDEIQKVSQE--LEKLRQQVLLQEEALGTMRENEELIREENN 485
Query: 590 NGQSE-ESKRKLNRRRYTDFRKVALEMRNRQRTVEEKLDKLINIVQESNNIXRDR 751
Q E E K++ + T ++A+ + RQ E KL + + +VQE N DR
Sbjct: 486 RFQKEAEDKQQEGKEMMTALEEIAVNLDVRQAECE-KLKRELEVVQEDNQSLEDR 539
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.73
Identities = 32/174 (18%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Frame = +2
Query: 239 LYLQNLDKFRSSKVKKKTVWAEIAHAVGNSPESCDKKFRNLKQ--TYVRLLKRRNRN-EI 409
LY +++ ++SK +K ++ H+ S R+L++ ++++L N + E
Sbjct: 859 LYRKSVALLKNSKEIEKILFRLNEHSRAKYTSSAHSTIRDLEKLVSHIKLTTSANDHFEK 918
Query: 410 VMIKWPYF--EIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEPSKFEQEPDMGE 583
+ ++ + I + + D +I+ E+ K L + + E++ ++
Sbjct: 919 AENAYEHYVKRVDSMIADLKKQQKSDELAEIERKRRESEEKERLEIEAKKEAERQREIKR 978
Query: 584 NSNGQSEESKRKLNRRRYTDFRKVALEM-RNRQRTVEEKLDKLI-NIVQESNNI 739
Q + ++++ ++ K A E + RQ +EKLDK++ N + E++ +
Sbjct: 979 KLEEQQQNAQKEHENYLISEIHKAAEETEKKRQNEEKEKLDKMVSNRLAEADGV 1032
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 31.5 bits (68), Expect = 0.73
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +2
Query: 419 KWPYFEIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEP---SKFEQEPDMGENS 589
K Y E ++Y + E +IQ Q+ E + + +L E + +E EN+
Sbjct: 428 KKKYEEERVKLYQQLDEKDDEIQKVSQE--LEKLRQQVLLQEEALGTMRENEELIREENN 485
Query: 590 NGQSE-ESKRKLNRRRYTDFRKVALEMRNRQRTVEEKLDKLINIVQESNNIXRDR 751
Q E E K++ + T ++A+ + RQ E KL + + +VQE N DR
Sbjct: 486 RFQKEAEDKQQEGKEMMTALEEIAVNLDVRQAECE-KLKRELEVVQEDNQSLEDR 539
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.1 bits (67), Expect = 0.97
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Frame = +2
Query: 455 SENGEYRPDIQVKIQDNATETVTKAILSMAEPSKFEQEPDMGEN--SNGQSEESKRKLNR 628
SE E +P I + D+ +++ + S + SK E D E+ +G+ EE K+K +
Sbjct: 71 SEKKE-KPPILNYLDDSDSDSADFSSSSKRKRSKRALENDSDEDVGDDGKEEEMKKKKEK 129
Query: 629 ----RRYTDFRKVALEMRNRQRTVEEK 697
RR + RK A + + RQ+ +EE+
Sbjct: 130 EEEERRAKEERKKAKKEKQRQKELEER 156
>AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical
protein M01B12.5a protein.
Length = 506
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 560 EQEPDMGENSNGQSEESKRK--LNRRRYTDFRKVALEMRNRQRTVEEKLDKLINIVQESN 733
+ D + NG+ KR RK+A+ RNR+ T EE+ ++ + +E
Sbjct: 426 DDSDDNDDEENGKKSRKKRAEPTEEEIQEKERKIAMHTRNREETAEERKERKAAVKEEKR 485
Query: 734 NIXRDR 751
+++
Sbjct: 486 EQRKEK 491
>Z81514-3|CAB04190.1| 78|Caenorhabditis elegans Hypothetical
protein F26F2.4 protein.
Length = 78
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 575 MGENSNGQSEESKRKLNRRRYTDFRKVALEMRNRQRTVEEKLDKLINIVQESNNI 739
M +N+ + E K N R++ DF K+ +EM N R ++ D N ++ NN+
Sbjct: 1 MSDNNTLRMAEMLDKQNSRQH-DFMKLMMEMNNSARLSDQARDDR-NAIRNENNL 53
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 420 FIITISFLFRLFKSLTYVCFKF---RNFLSQLSGLFPTACAISAQTVFFFTFELRNLS 256
F +TI L KS Y+ KF + L+ LSGLF + +IS+ F F E +S
Sbjct: 24 FHLTILIRKSLRKSGIYIFLKFIAALDILNLLSGLFYNSLSISSTFPFIFMTEFSTIS 81
>Z78064-3|CAB01512.1| 157|Caenorhabditis elegans Hypothetical
protein F57B1.5 protein.
Length = 157
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -2
Query: 496 NFYLYIWSILPILTVDLFKYFKIRPFYHNNLISISSLQKSYICLF*ISELFITALGAIS 320
NF L I+ IL I + +F ++ FY + S+ ++ + L IS FIT L S
Sbjct: 47 NFLLAIYDILAIGIASISLWFIVQKFYWIKVESVFNIIGILLSLASISTSFITTLDPAS 105
>Z74045-3|CAA98551.1| 165|Caenorhabditis elegans Hypothetical
protein T27F2.4 protein.
Length = 165
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 536 SMAEPSKFEQEPDMGENSNGQSEESKRKLNRRRYTDFRKVALEMRNRQRTVEEKLDK 706
S A P K + E ++GQ S++K +RR Y R+ +MR + V+ D+
Sbjct: 70 SSAAPGKIRRGRPQQEIADGQDAHSQKKRHRRLYA--RQYRAQMRQKVENVKSLHDE 124
>AL032655-9|CAA21725.3| 339|Caenorhabditis elegans Hypothetical
protein Y6B3B.5a protein.
Length = 339
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +2
Query: 383 LKRRNRNEIVMIKWPYFEIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEPSKFE 562
L +N I+M+ + + I+ E+G+ P+I V ++D + V + K
Sbjct: 5 LHPKNTFTIIMVVG-FLYLAYLIFFESGDGMPEIDVDLKDVISYAVLAIEMGGHAVMKVN 63
Query: 563 QEPDMGENSNGQSEESKRKLNRR 631
+E ++ + G ++E K +L R
Sbjct: 64 EEKNLNAAAKGLTDEGKEELLTR 86
>AL032655-8|CAH60799.1| 348|Caenorhabditis elegans Hypothetical
protein Y6B3B.5b protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +2
Query: 383 LKRRNRNEIVMIKWPYFEIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEPSKFE 562
L +N I+M+ + + I+ E+G+ P+I V ++D + V + K
Sbjct: 14 LHPKNTFTIIMVVG-FLYLAYLIFFESGDGMPEIDVDLKDVISYAVLAIEMGGHAVMKVN 72
Query: 563 QEPDMGENSNGQSEESKRKLNRR 631
+E ++ + G ++E K +L R
Sbjct: 73 EEKNLNAAAKGLTDEGKEELLTR 95
>Z35640-6|CAA84702.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +2
Query: 485 QVKIQDNATETVTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKLNRR--RYTDFRKVA 658
Q K+ + TV + E S E+EP N+N S + R R + ++
Sbjct: 25 QRKVSTGSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTSTVAAPTREPTRVSTLKREE 84
Query: 659 LEMRNRQRTVEEKLDKLINIVQESNNIXRDRNILFH 766
E + ++R E+ + VQE + N H
Sbjct: 85 KEKKQKERMERERRELEEKRVQEDEMKKEEHNHTVH 120
>Z35639-9|CAA84700.2| 1226|Caenorhabditis elegans Hypothetical
protein F43D9.1 protein.
Length = 1226
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 2/96 (2%)
Frame = +2
Query: 485 QVKIQDNATETVTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKLNRR--RYTDFRKVA 658
Q K+ + TV + E S E+EP N+N S + R R + ++
Sbjct: 25 QRKVSTGSAPTVPPPAVPPPESSADEEEPRASSNNNYSSTSTVAAPTREPTRVSTLKREE 84
Query: 659 LEMRNRQRTVEEKLDKLINIVQESNNIXRDRNILFH 766
E + ++R E+ + VQE + N H
Sbjct: 85 KEKKQKERMERERRELEEKRVQEDEMKKEEHNHTVH 120
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
protein B0207.5 protein.
Length = 3279
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 479 DIQVKIQDNAT-ETVTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKLNRRRYTDFRK 652
+I V++ N+ E K LS PSK QEP G N S + KL+ + Y +++K
Sbjct: 728 NIDVEVLSNSEYEEYKKNCLSSVIPSKERQEPGGGAPMN-CSTVNVDKLSDKEYKEYKK 785
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 518 VTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKLNRRRYTDFRKVALEMRNRQRTVEEK 697
V A+ ++ SK+ GE S QS + NR ++ +FR A + + + K
Sbjct: 932 VNYALDPLSAHSKYFSISPFGEISTKQSMSTILSRNRLQFFEFRVSACDSPISGQQLCSK 991
Query: 698 LDKLINIVQESN 733
D ++N++ +N
Sbjct: 992 ADVVVNVIGSTN 1003
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 518 VTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKLNRRRYTDFRKVALEMRNRQRTVEEK 697
V A+ ++ SK+ GE S QS + NR ++ +FR A + + + K
Sbjct: 1076 VNYALDPLSAHSKYFSISPFGEISTKQSMSTILSRNRLQFFEFRVSACDSPISGQQLCSK 1135
Query: 698 LDKLINIVQESN 733
D ++N++ +N
Sbjct: 1136 ADVVVNVIGSTN 1147
>U49944-4|AAA93419.1| 457|Caenorhabditis elegans Neuropeptide
receptor family protein1 protein.
Length = 457
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/58 (34%), Positives = 31/58 (53%)
Frame = -2
Query: 481 IWSILPILTVDLFKYFKIRPFYHNNLISISSLQKSYICLF*ISELFITALGAISYRMC 308
I++I+P LTV LF +F + F + LI ++ K+ L + +FI L A MC
Sbjct: 23 IYAIVPFLTVYLFLFF-LGLFGNVTLIYVTCSHKA---LLSVQNIFILNLAASDCMMC 76
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 735 LXDSCTIFINLSNFSSTVLCLFLISSATLRKSVYLRLFNFLLDS 604
+ D I + + +L LF I LRK+V + LFNF DS
Sbjct: 280 IFDENKIVMEQNGTIEKLLKLFPIQDPELRKAVIMLLFNFSFDS 323
>U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform a protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 735 LXDSCTIFINLSNFSSTVLCLFLISSATLRKSVYLRLFNFLLDS 604
+ D I + + +L LF I LRK+V + LFNF DS
Sbjct: 297 IFDENKIVMEQNGTIEKLLKLFPIQDPELRKAVIMLLFNFSFDS 340
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 28.3 bits (60), Expect = 6.8
Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Frame = +2
Query: 341 DKKFRNLKQTYVRLLKRRNRNEIVMIKWPYFEIFEQI----YSENGEYRPDIQVKIQ--D 502
DK R ++ L K + E +F++FE+I +SE E Q ++
Sbjct: 123 DKLEREHRKNQKNLKKEEKKQEKQQEMENFFKVFEEIRSLAWSELMEQESVAQYQLHHHQ 182
Query: 503 NATETVT-----KAILSMAEPSKFEQEPDMG---ENSNGQSEESKRKLNRRRYTDFRKVA 658
N E T + +LS + + + D G E +EE +++L + + +++
Sbjct: 183 NVHEPGTHVERHEKMLSPSRRRGHKDDDDFGKRHEMKQKHAEELRQQLQEAKASKLKELT 242
Query: 659 L---EMRNRQRTVEEKLDKLINIVQESNNIXRDRNIL 760
E+R +Q ++E+ +L+ + + RD+NI+
Sbjct: 243 SRVEEVRMKQEALKERKRQLLEARMQRASDNRDKNIM 279
>AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein.
Length = 696
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 735 LXDSCTIFINLSNFSSTVLCLFLISSATLRKSVYLRLFNFLLDS 604
+ D I + + +L LF I LRK+V + LFNF DS
Sbjct: 297 IFDENKIVMEQNGTIEKLLKLFPIQDPELRKAVIMLLFNFSFDS 340
>AC024882-11|AAX22280.1| 333|Caenorhabditis elegans Seven tm
receptor protein 169,isoform b protein.
Length = 333
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = -2
Query: 580 THIGFLFKFRWFSHRQYSLSDSFSCIVLNFYLYIWSILPILTVDLFKYFKIRPFYHNNLI 401
T I F FR+F+ + F YL +W I+P+++ ++ ++ F H N +
Sbjct: 104 TTISIQFVFRYFALERKGRITYFR----GHYLIVWFIVPLVSASIW-ITQLWVFQHPNSV 158
Query: 400 SISSLQKSYICLF*ISELFITALGAISY 317
+ + L ++ + ++ IT G++ Y
Sbjct: 159 TSAYLSETVFVNYGMNISDITYTGSLFY 186
>AC024882-10|AAF60929.1| 341|Caenorhabditis elegans Seven tm
receptor protein 169,isoform a protein.
Length = 341
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = -2
Query: 580 THIGFLFKFRWFSHRQYSLSDSFSCIVLNFYLYIWSILPILTVDLFKYFKIRPFYHNNLI 401
T I F FR+F+ + F YL +W I+P+++ ++ ++ F H N +
Sbjct: 104 TTISIQFVFRYFALERKGRITYFR----GHYLIVWFIVPLVSASIW-ITQLWVFQHPNSV 158
Query: 400 SISSLQKSYICLF*ISELFITALGAISY 317
+ + L ++ + ++ IT G++ Y
Sbjct: 159 TSAYLSETVFVNYGMNISDITYTGSLFY 186
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -3
Query: 735 LXDSCTIFINLSNFSSTVLCLFLISSATLRKSVYLRLFNFLLDS 604
+ D I + + +L LF I LRK+V + LFNF DS
Sbjct: 280 IFDENKIVMEQNGTIEKLLKLFPIQDPELRKAVIMLLFNFSFDS 323
>Z81514-1|CAB04188.1| 144|Caenorhabditis elegans Hypothetical
protein F26F2.2 protein.
Length = 144
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/97 (21%), Positives = 40/97 (41%)
Frame = +2
Query: 470 YRPDIQVKIQDNATETVTKAILSMAEPSKFEQEPDMGENSNGQSEESKRKLNRRRYTDFR 649
Y + + +D+ ++ L + + M +N+ + E K N ++ DF
Sbjct: 32 YNARLSDQARDDRNAIRSENNLKEVNAEDYSKPNTMSDNNTLRMAEMLDKQNSQQ-NDFM 90
Query: 650 KVALEMRNRQRTVEEKLDKLINIVQESNNIXRDRNIL 760
K +EM N R ++ D N ++ NN+ N L
Sbjct: 91 KFMMEMNNSARLSDQARDDR-NAIRSENNLKEVYNKL 126
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -3
Query: 585 FSPISGSCSNFDGSAIDNIALVTVSVALS*IFTCISGLYSPFSL*ICS 442
+SP S S ++F + + T L TC +GL+SP + CS
Sbjct: 1068 YSPFSLSTTSFTSGTVATVTCTTGGSMLG-TSTCTNGLWSPAIMGTCS 1114
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 227 TLLDLYLQNLDKFRSSKVKKKTVWAEIAHAVGNSPESCDKKFRNLKQTYVRLLKRRNRN 403
T + L+L +D F K+K K +A P+ CD +++ ++ L K + R+
Sbjct: 273 TAMILFLNKIDLF---KIKIKHTNITVALTSYKGPQECDSALDYIRKRFISLNKNKKRS 328
>Z68337-8|CAA92749.2| 241|Caenorhabditis elegans Hypothetical
protein M7.12 protein.
Length = 241
Score = 27.9 bits (59), Expect = 9.0
Identities = 26/92 (28%), Positives = 37/92 (40%)
Frame = +2
Query: 371 YVRLLKRRNRNEIVMIKWPYFEIFEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEP 550
Y +K NRNE+V F + E + G DIQ D E V K +S+
Sbjct: 25 YFETVKHDNRNEVVDFLNNNFRVEEPLSKAAGMTESDIQ-SCFDGVFERVLKNEVSILAR 83
Query: 551 SKFEQEPDMGENSNGQSEESKRKLNRRRYTDF 646
SK + + +G N + + K N DF
Sbjct: 84 SK-QSDEIVGCMLNSVWKRNDPKKNEDEAEDF 114
>U55364-4|AAA97972.1| 382|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 31,
isoform a protein.
Length = 382
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/67 (19%), Positives = 28/67 (41%)
Frame = +2
Query: 440 FEQIYSENGEYRPDIQVKIQDNATETVTKAILSMAEPSKFEQEPDMGENSNGQSEESKRK 619
F YS N +Y+P + + T+ + A+P ++ Q G + + + +
Sbjct: 32 FAAAYSTNQQYQPSQGAQYDQYGSSTLQYNNGATAQPIQYNQNQQYGSTAQYNQNQMQNQ 91
Query: 620 LNRRRYT 640
N +Y+
Sbjct: 92 QNSNQYS 98
>U40029-10|AAN65326.1| 644|Caenorhabditis elegans Hypothetical
protein F10G7.9b protein.
Length = 644
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 539 MAEPS-KFEQEPDMGENSNGQSEESKRKLNR-----RRYTDFRKVALEMRNRQRTVEE-K 697
+AE S KFE+E D +N+N Q E+ ++ + K A EMRN R +
Sbjct: 288 LAEISIKFEEERDKVQNANKQGREAVAMAQEAAELAKKAEEMNKKATEMRNACRDATKLG 347
Query: 698 LDKLINIVQESNNIXRDRNIL 760
D++ I+ E I + +++
Sbjct: 348 KDEMRRILIEKQKIQNEIDLM 368
>U40029-9|AAN65325.1| 727|Caenorhabditis elegans Hypothetical
protein F10G7.9a protein.
Length = 727
Score = 27.9 bits (59), Expect = 9.0
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2
Query: 539 MAEPS-KFEQEPDMGENSNGQSEESKRKLNR-----RRYTDFRKVALEMRNRQRTVEE-K 697
+AE S KFE+E D +N+N Q E+ ++ + K A EMRN R +
Sbjct: 371 LAEISIKFEEERDKVQNANKQGREAVAMAQEAAELAKKAEEMNKKATEMRNACRDATKLG 430
Query: 698 LDKLINIVQESNNIXRDRNIL 760
D++ I+ E I + +++
Sbjct: 431 KDEMRRILIEKQKIQNEIDLM 451
>U29244-16|AAQ23126.1| 172|Caenorhabditis elegans Hypothetical
protein ZK1248.19 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 659 LEMRNRQRTVEEKLDKLINIVQESNNIXRD 748
L ++N Q+T++ + +L I QE NN+ D
Sbjct: 6 LLIKNAQKTIDRLIRQLAEIEQEENNLEED 35
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 227 TLLDLYLQNLDKFRSSKVKKKTVWAEIAHAVGNSPESCDKKFRNLKQTYVRLLKRRNRN 403
T + L+L +D F K+K K +A P+ CD +++ ++ L K + R+
Sbjct: 273 TAMILFLNKIDLF---KIKIKHTNITVALTSYKGPQECDSALDYIRKRFISLNKNKKRS 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,895,007
Number of Sequences: 27780
Number of extensions: 328272
Number of successful extensions: 1209
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1209
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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