Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4b09
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF361354-1|AAL50049.1| 426|Homo sapiens voltage-dependent calci... 31 4.5
D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein. 30 6.0
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 30 6.0
AB209135-1|BAD92372.1| 761|Homo sapiens mastermind-like 1 varia... 30 6.0
BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein. 30 7.9
BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein. 30 7.9
BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein. 30 7.9
AF225896-1|AAG33700.1| 1735|Homo sapiens tensin protein. 30 7.9
AC009469-1|AAX88952.1| 1735|Homo sapiens unknown protein. 30 7.9
AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein. 30 7.9
>AF361354-1|AAL50049.1| 426|Homo sapiens voltage-dependent calcium
channel gamma-8 subunit protein.
Length = 426
Score = 30.7 bits (66), Expect = 4.5
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 259 HSLFYLKLGAGMTPDVAREPQSPTARRPSGSAVARAPPTTRFQRHAQPRVSELLRRFEP 435
H+ F + G G+T V R P P R P+ SA A P T + A + L R+ P
Sbjct: 370 HNAFPKEAGGGVTVTVTRPPAPPAPRHPAPSAPA---PGTLAKGAAASNTNTLNRKTTP 425
>D83785-1|BAA12114.2| 1042|Homo sapiens KIAA0200 protein.
Length = 1042
Score = 30.3 bits (65), Expect = 6.0
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -2
Query: 376 LSAARAPPHCRSASALWATAAREQHPASCRRPASNKTSYG-LMPFHVTLDGSPPLGGFPG 200
L AA P H R A+ L T R A+ + + YG L P H PLG
Sbjct: 118 LDAADGPEHGRPATHLHDTVKRNLDSATSPQNGDQQNGYGDLFPGHKKTRREAPLGVAIS 177
Query: 199 AASLSP*NIIGFQIKGS 149
+ L P + +G K S
Sbjct: 178 SNGLPPASPLGQSDKPS 194
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 30.3 bits (65), Expect = 6.0
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 YLKLGAGMTPDVAREPQSPTARRPS-GSAVARAPPTTRFQRHAQPRVSELLRRFEPA 438
Y+ A M P + R PQ PS + ++RAP FQR + R+S F P+
Sbjct: 1230 YMSSSASMQP-ITRPPQPSYQTPPSLSNHISRAPSPASFQRSLENRMSPSKSPFLPS 1285
>AB209135-1|BAD92372.1| 761|Homo sapiens mastermind-like 1 variant
protein.
Length = 761
Score = 30.3 bits (65), Expect = 6.0
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Frame = -2
Query: 376 LSAARAPPHCRSASALWATAAREQHPASCRRPASNKTSYG-LMPFHVTLDGSPPLGGFPG 200
L AA P H R A+ L T R A+ + + YG L P H PLG
Sbjct: 129 LDAADGPEHGRPATHLHDTVKRNLDSATSPQNGDQQNGYGDLFPGHKKTRREAPLGVAIS 188
Query: 199 AASLSP*NIIGFQIKGS 149
+ L P + +G K S
Sbjct: 189 SNGLPPASPLGQSDKPS 205
>BC126910-1|AAI26911.2| 1768|Homo sapiens TNS1 protein protein.
Length = 1768
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 301 PASCRRPASNKTSYGLMPFHVTLDGSPPLGGFPGA 197
P+ CR PA GL T GSP LG PGA
Sbjct: 1277 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1311
>BC116188-1|AAI16189.1| 1713|Homo sapiens TNS1 protein protein.
Length = 1713
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 301 PASCRRPASNKTSYGLMPFHVTLDGSPPLGGFPGA 197
P+ CR PA GL T GSP LG PGA
Sbjct: 1222 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1256
>BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein.
Length = 1721
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 301 PASCRRPASNKTSYGLMPFHVTLDGSPPLGGFPGA 197
P+ CR PA GL T GSP LG PGA
Sbjct: 1231 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1265
>AF225896-1|AAG33700.1| 1735|Homo sapiens tensin protein.
Length = 1735
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 301 PASCRRPASNKTSYGLMPFHVTLDGSPPLGGFPGA 197
P+ CR PA GL T GSP LG PGA
Sbjct: 1244 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1278
>AC009469-1|AAX88952.1| 1735|Homo sapiens unknown protein.
Length = 1735
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 301 PASCRRPASNKTSYGLMPFHVTLDGSPPLGGFPGA 197
P+ CR PA GL T GSP LG PGA
Sbjct: 1244 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 1278
>AB209238-1|BAD92475.1| 873|Homo sapiens tensin variant protein.
Length = 873
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 301 PASCRRPASNKTSYGLMPFHVTLDGSPPLGGFPGA 197
P+ CR PA GL T GSP LG PGA
Sbjct: 382 PSLCRHPAGVYQVSGLHNKVATTPGSPSLGRHPGA 416
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,867,906
Number of Sequences: 237096
Number of extensions: 1769654
Number of successful extensions: 6587
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6579
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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