Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4b05
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    27   0.38 
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   4.7  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 27.1 bits (57), Expect = 0.38
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 124  FLLGRKHTNALRFEPLVSARTQPPPEIPDG-PSHKHA 231
            +L+G     A   +  +   T PPP  P+G P+H+H+
Sbjct: 1250 YLMGSTQAIAGLAQGSMGPHTPPPPNTPNGMPTHQHS 1286


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
 Frame = +2

Query: 86  YATFHLHCRLSGTSSLVGSIQTLFVLSHWFRLGPSLLQKSQTDPRTSMPTTTITQETLDA 265
           Y   +  CR++ +         LF L+HW    P LL   +T  +   P     +   DA
Sbjct: 60  YLALYQQCRINASERANLRDNFLFRLNHWHDDHPFLL---ETVAKAYEPFKAALESEQDA 116

Query: 266 KLLLQLM--LPRNYLVLAQTKG 325
              L+L+  L R  L+ +   G
Sbjct: 117 HRSLRLVPELQRKQLIYSIEAG 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 526,445
Number of Sequences: 2352
Number of extensions: 9865
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)