Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt4b02
         (363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.       22   8.1  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    22   8.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       22   8.1  

>X98185-1|CAA66860.1|  123|Anopheles gambiae histone H2B protein.
          Length = 123

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 77  VPGRIQSHCVSRGSASVGRH 136
           +PG +  H VS G+ +V ++
Sbjct: 100 LPGELAKHAVSEGTKAVTKY 119


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 19  CFCGDVFVWCSSGTKPVPFCARSDTVPL 102
           CFC   FV  S   K +P C+ ++ +PL
Sbjct: 70  CFCKPGFVRESKEGKCIPKCS-NENMPL 96


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 32  TCLCGVAPELNQCHFVPGRIQSHC 103
           TC  G   +L++ H  P  +QS C
Sbjct: 170 TCPEGFEAQLSEQHCCPQCVQSQC 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,220
Number of Sequences: 2352
Number of extensions: 7388
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)