Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt4a19
(707 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-13|CAA90115.2| 215|Caenorhabditis elegans Hypothetical p... 137 6e-33
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 31 0.61
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 31 0.61
Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z82261-6|CAJ76925.1| 111|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore co... 29 2.5
U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore co... 29 2.5
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 29 4.3
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 29 4.3
AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical... 28 5.7
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF000299-6|AAC47978.1| 297|Caenorhabditis elegans Hypothetical ... 28 7.5
Z78413-3|CAB01659.1| 202|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical pr... 27 9.9
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 27 9.9
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 27 9.9
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 27 9.9
AC006750-1|AAF60535.1| 527|Caenorhabditis elegans Hypothetical ... 27 9.9
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 27 9.9
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 27 9.9
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 27 9.9
>Z49909-13|CAA90115.2| 215|Caenorhabditis elegans Hypothetical
protein C14A4.11 protein.
Length = 215
Score = 137 bits (332), Expect = 6e-33
Identities = 76/167 (45%), Positives = 106/167 (63%), Gaps = 2/167 (1%)
Frame = +1
Query: 211 ASQTLRAALTKAEAAVPGLNYDLVAGIMRRADIPVNMNESLLRLQGSLTDSECTDLRLNR 390
A L ALT E A P YD ++ +++ VN+ ES LR+ + S DL ++
Sbjct: 37 ALNKLHTALTTCEQASPSFLYDFTKVLLDDSELSVNLQESYLRMHDT---SPTNDLIVSG 93
Query: 391 TEEA--FQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYTP 564
E+ ++EL K++ L+++LSR+P+E++DR FLETIK IAS+IKKLL+A+N V P
Sbjct: 94 YEQNADYKELTKRAIELRRVLSRVPEEMSDRHAFLETIKLIASSIKKLLEAINAVYRIVP 153
Query: 565 GPGKQVLEQRKREFVKYSKRFSTTLKEYFKEGQANAVFVSALYLIHQ 705
+ +E+RKREFV YSKRFS TLK YFK+ AN V VSA L+ Q
Sbjct: 154 LTAQPAVEKRKREFVHYSKRFSNTLKTYFKDQNANQVSVSANQLVFQ 200
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 31.5 bits (68), Expect = 0.61
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = +1
Query: 328 SLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEI 507
SLLRL L D D+ TE A +L S K+L + + D+K K
Sbjct: 397 SLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVIS---DKMLKACAERMKDKKP-----KVR 448
Query: 508 ASAIKKLLDAVNEVSTYTPGP 570
AIK+L+D N V T +P P
Sbjct: 449 IQAIKRLMDLYNHVMTSSPQP 469
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 31.5 bits (68), Expect = 0.61
Identities = 28/81 (34%), Positives = 37/81 (45%)
Frame = +1
Query: 328 SLLRLQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEI 507
SLLRL L D D+ TE A +L S K+L + + D+K K
Sbjct: 397 SLLRLSVDLNDDIRRDVVTGVTEVAKTKLEVIS---DKMLKACAERMKDKKP-----KVR 448
Query: 508 ASAIKKLLDAVNEVSTYTPGP 570
AIK+L+D N V T +P P
Sbjct: 449 IQAIKRLMDLYNHVMTSSPQP 469
>Z81509-2|CAB04155.1| 239|Caenorhabditis elegans Hypothetical
protein F21A3.4 protein.
Length = 239
Score = 31.1 bits (67), Expect = 0.81
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 352 LTDSECTDLRLN--RTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKK 525
L + DL+L+ R EE + N KSA ++K++ + ++ +E K + KK
Sbjct: 143 LHKQQLKDLKLDCDREEEKCEYWNDKSAEIEKVVEMLKEQRKSLGERVEEEKRMEQEQKK 202
Query: 526 LLDAVNEVSTYTPGPGKQVLEQRKREFVKYS 618
+L+ + E+ G +Q+L++ +S
Sbjct: 203 MLEEL-EMLLKKTGKKRQILDENANLVASFS 232
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +1
Query: 310 PVNMNESLLRLQGSLTDSECTDLRLNR-TEEAFQELNKKSAALKKILSRIPD--EITD-- 474
P++ E L RLQ S E T + +NR E+ ++L S +K +S + D ++ D
Sbjct: 469 PIDEKEKLSRLQHSTHAFEATLIVMNRINEDNERKLGNISEQYEKKVSELGDLKKMLDEA 528
Query: 475 RKTFLETIKEIASAIKKLL-DAVNEVSTYTPGPGKQVLEQRK 597
RK F E ++++ ++ ++++ + N V + Q+ E+ K
Sbjct: 529 RKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQIAEKNK 570
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Frame = +1
Query: 310 PVNMNESLLRLQGSLTDSECTDLRLNR-TEEAFQELNKKSAALKKILSRIPD--EITD-- 474
P++ E L RLQ S E T + +NR E+ ++L S +K +S + D ++ D
Sbjct: 537 PIDEKEKLSRLQHSTHAFEATLIVMNRINEDNERKLGNISEQYEKKVSELGDLKKMLDEA 596
Query: 475 RKTFLETIKEIASAIKKLL-DAVNEVSTYTPGPGKQVLEQRK 597
RK F E ++++ ++ ++++ + N V + Q+ E+ K
Sbjct: 597 RKKFEEDVEQMKNSNQQVIRNHANAVESLQKTHETQIAEKNK 638
>Z82261-6|CAJ76925.1| 111|Caenorhabditis elegans Hypothetical
protein C35D6.9b protein.
Length = 111
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 501 LDSLKKSLPISYLIWNATQYLFQSSRFLIKLLKCLF 394
L S+K+S P +++W A L F++ +L CL+
Sbjct: 11 LVSVKRSTPQRFILWQAITVLIFKFMFIVLVLTCLW 46
>Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical
protein C35D6.9a protein.
Length = 304
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 501 LDSLKKSLPISYLIWNATQYLFQSSRFLIKLLKCLF 394
L S+K+S P +++W A L F++ +L CL+
Sbjct: 204 LVSVKRSTPQRFILWQAITVLIFKFMFIVLVLTCLW 239
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
protein F12F6.5 protein.
Length = 1059
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +1
Query: 445 LSRIPDEI-TDRKTFLETIKEIASAIKKLLDAVNEVSTYTPG-PGKQVLEQRKREFVKYS 618
L+R+ E+ T KT+ E+ +K A +V Y PGK +R R VKY
Sbjct: 185 LNRVLTELQTAMKTYQLCYAEMCGIERKKRSAEEDVKRYEDSNPGKYEGSRRHRSLVKYF 244
Query: 619 KR 624
KR
Sbjct: 245 KR 246
>U80446-3|AAL77180.1| 889|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform b protein.
Length = 889
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 632 VENRFEYFTNSLFLCSNTCFPGPGVYVDTSFTASSNFFMAEAIS----LIVSRKVFRSVI 465
VEN ++Y ++ F+ T GP V + +F +S F ++ I +SV+
Sbjct: 718 VENAYDYDSDGRFINIKTALEGPIVKLAAAFVEASTFDNSKPFEDPHPQIFGGSFTQSVV 777
Query: 464 SSGMRLSI 441
S+ +R+S+
Sbjct: 778 SANIRVSV 785
>U80446-2|AAB37803.1| 1562|Caenorhabditis elegans Nuclear pore
complex protein protein6, isoform a protein.
Length = 1562
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = -1
Query: 632 VENRFEYFTNSLFLCSNTCFPGPGVYVDTSFTASSNFFMAEAIS----LIVSRKVFRSVI 465
VEN ++Y ++ F+ T GP V + +F +S F ++ I +SV+
Sbjct: 718 VENAYDYDSDGRFINIKTALEGPIVKLAAAFVEASTFDNSKPFEDPHPQIFGGSFTQSVV 777
Query: 464 SSGMRLSI 441
S+ +R+S+
Sbjct: 778 SANIRVSV 785
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 382 LNRTEEAFQELNKKSAALKKILSRIPDEITDR-KTFLETIKEIASAIKKLLDAVNEVSTY 558
L R + +E SA L + S P E+ D K + + + S I L + VNE +T
Sbjct: 263 LKRDSDGIEESKNTSAPLASVES--PGEVEDAFKKEVHMQQAVQSGI--LDETVNEANTS 318
Query: 559 TPGPGKQVLEQRKRE 603
P +Q +QRK++
Sbjct: 319 EGTPKRQRRQQRKKD 333
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 382 LNRTEEAFQELNKKSAALKKILSRIPDEITDR-KTFLETIKEIASAIKKLLDAVNEVSTY 558
L R + +E SA L + S P E+ D K + + + S I L + VNE +T
Sbjct: 263 LKRDSDGIEESKNTSAPLASVES--PGEVEDAFKKEVHMQQAVQSGI--LDETVNEANTS 318
Query: 559 TPGPGKQVLEQRKRE 603
P +Q +QRK++
Sbjct: 319 EGTPKRQRRQQRKKD 333
>AL023828-23|CAD56603.1| 294|Caenorhabditis elegans Hypothetical
protein Y17G7B.20 protein.
Length = 294
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 361 SECTDLRLNRTE-EAFQEL-NKKSAALKKILSRIPDEITDRKTFLETIKEIASAI 519
+E + L+++ +E EA L +++A +KK L++ DEIT K ++ +IA +
Sbjct: 163 NEMSTLQMHNSELEAELRLAREENAKMKKALAKASDEITQLKKVIDQDSQIARVV 217
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 27.9 bits (59), Expect = 7.5
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 2/153 (1%)
Frame = +1
Query: 139 PVTSLVLPVLIRPVLTQLEKYDLAASQTLRAALTKAEAAVPG-LNYDLVAGIMRRADIPV 315
P TSL++P + + + L AS L L +A + +P L + ++ +
Sbjct: 113 PPTSLIIPQVAKNLFPAGPIASLQASSMLTVPLLQAASHIPSMLQLCQLQPTTIQSPVYA 172
Query: 316 NMNESLLRLQGSL-TDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLE 492
+ + SL + S + R E+ Q+ S+ + KI R PD TD
Sbjct: 173 STQQPASTSASSLFSSSSSSAFHPFRPSESAQQSFPSSSVIVKIERRSPDSSTDVNMPQP 232
Query: 493 TIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQ 591
++ +S I+++ + TP P Q ++Q
Sbjct: 233 QLQPGSSVIQQI---GQPAPSGTPQPVIQAVQQ 262
>AF000299-6|AAC47978.1| 297|Caenorhabditis elegans Hypothetical
protein E03H12.2 protein.
Length = 297
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -3
Query: 291 DSCHQIIIKTRYCSLCFG--ESCS*C 220
DSC + +K YC L FG SC+ C
Sbjct: 25 DSCINLCLKETYCMLAFGNDSSCTLC 50
>Z78413-3|CAB01659.1| 202|Caenorhabditis elegans Hypothetical
protein T01C3.3 protein.
Length = 202
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 382 LNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDAVNEVSTYT 561
L + EA + L ++S K + R+ ++ +R T E++KE A KKLLD ++TY+
Sbjct: 74 LEASREAHRLLQEESNKSKVSVMRLTFKL-NRITH-ESVKEQAVLKKKLLDCETRLATYS 131
>U41994-6|AAK31526.1| 1286|Caenorhabditis elegans Hypothetical
protein F59A6.5 protein.
Length = 1286
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/49 (22%), Positives = 28/49 (57%)
Frame = +1
Query: 391 TEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAIKKLLDA 537
++E + L ++SA + L ++ +E+ ++K + KE+ + + +DA
Sbjct: 611 SQETCERLERESATKEDKLDKLEEELQEKKQQIAESKELVTYLHSQIDA 659
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 478 KTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFS 630
K T++ IA ++L + +N V++ +++ E++KRE+ + KRF+
Sbjct: 108 KVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI-ERKKREYEQLQKRFA 157
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 478 KTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFS 630
K T++ IA ++L + +N V++ +++ E++KRE+ + KRF+
Sbjct: 170 KVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI-ERKKREYEQLQKRFA 219
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 478 KTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFS 630
K T++ IA ++L + +N V++ +++ E++KRE+ + KRF+
Sbjct: 181 KVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI-ERKKREYEQLQKRFA 230
>AC006750-1|AAF60535.1| 527|Caenorhabditis elegans Hypothetical
protein Y39F10B.1a protein.
Length = 527
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 200 YFSSCVRTGRIKTGNTKEV 144
+F C GRIK GN KEV
Sbjct: 11 FFGFCSTAGRIKAGNEKEV 29
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 478 KTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFS 630
K T++ IA ++L + +N V++ +++ E++KRE+ + KRF+
Sbjct: 108 KVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI-ERKKREYEQLQKRFA 157
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 478 KTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFS 630
K T++ IA ++L + +N V++ +++ E++KRE+ + KRF+
Sbjct: 170 KVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI-ERKKREYEQLQKRFA 219
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +1
Query: 478 KTFLETIKEIASAIKKLLDAVNEVSTYTPGPGKQVLEQRKREFVKYSKRFS 630
K T++ IA ++L + +N V++ +++ E++KRE+ + KRF+
Sbjct: 181 KVLQATVQNIAQETEQLSNKLNNVASDEAELDEKI-ERKKREYEQLQKRFA 230
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,300,658
Number of Sequences: 27780
Number of extensions: 315905
Number of successful extensions: 857
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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